Wall clock time and date at job start Tue Mar 31 2020 13:59:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 N 1.31931 * 119.01521 * 2 1 4 4 C 1.32141 * 121.05573 * 180.02562 * 3 2 1 5 5 C 1.38988 * 119.12015 * 359.74477 * 4 3 2 6 6 Cl 1.73609 * 120.88457 * 180.25434 * 5 4 3 7 7 C 1.39621 * 118.23233 * 0.51600 * 5 4 3 8 8 C 1.48374 * 120.56906 * 179.76111 * 7 5 4 9 9 O 1.21490 * 119.99634 * 359.72105 * 8 7 5 10 10 N 1.34768 * 120.00374 * 179.72075 * 8 7 5 11 11 C 1.47422 * 125.64957 * 180.02562 * 10 8 7 12 12 C 1.54913 * 104.83234 * 204.09300 * 11 10 8 13 13 H 1.08993 * 111.00353 * 81.06585 * 12 11 10 14 14 C 1.53005 * 111.00185 * 204.91445 * 12 11 10 15 15 C 1.55149 * 101.58081 * 322.98715 * 12 11 10 16 16 H 1.09002 * 110.87705 * 277.07084 * 15 12 11 17 17 N 1.46506 * 110.72085 * 153.86559 * 15 12 11 18 18 C 1.36932 * 120.00027 * 160.02319 * 17 15 12 19 19 H 1.07994 * 120.00238 * 0.02562 * 18 17 15 20 20 C 1.38815 * 119.99707 * 180.02562 * 18 17 15 21 21 N 1.31622 * 120.00000 * 180.02562 * 20 18 17 22 22 Si 1.86793 * 120.00147 * 359.97438 * 20 18 17 23 23 H 1.48501 * 109.47033 * 90.00199 * 22 20 18 24 24 H 1.48506 * 109.47196 * 210.00023 * 22 20 18 25 25 H 1.48496 * 109.47398 * 330.00560 * 22 20 18 26 26 C 1.47022 * 125.65028 * 359.97390 * 10 8 7 27 27 N 1.31515 * 119.02149 * 180.02562 * 2 1 3 28 28 H 1.09002 * 109.46725 * 269.97710 * 1 2 3 29 29 H 1.08997 * 109.47750 * 29.97502 * 1 2 3 30 30 H 1.09002 * 109.47173 * 149.98216 * 1 2 3 31 31 H 1.08000 * 120.43726 * 180.02562 * 4 3 2 32 32 H 1.09006 * 110.36580 * 322.93149 * 11 10 8 33 33 H 1.09007 * 110.37042 * 85.14354 * 11 10 8 34 34 H 1.09001 * 109.46810 * 172.19648 * 14 12 11 35 35 H 1.08995 * 109.47077 * 292.19383 * 14 12 11 36 36 H 1.08997 * 109.47293 * 52.19634 * 14 12 11 37 37 H 0.96996 * 119.99556 * 340.02773 * 17 15 12 38 38 H 0.96990 * 120.00519 * 180.02562 * 21 20 18 39 39 H 1.09005 * 109.88380 * 59.55819 * 26 10 8 40 40 H 1.09004 * 109.88423 * 298.39725 * 26 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1469 1.1537 0.0000 4 6 3.4674 1.2008 -0.0005 5 6 4.1866 0.0114 0.0044 6 17 5.9227 0.0198 0.0105 7 6 3.4758 -1.1903 -0.0015 8 6 4.1912 -2.4902 -0.0020 9 8 5.4058 -2.5150 -0.0025 10 7 3.4936 -3.6433 -0.0020 11 6 4.0739 -4.9985 -0.0019 12 6 2.9733 -5.9011 -0.6132 13 1 2.9789 -5.8414 -1.7015 14 6 3.1291 -7.3494 -0.1448 15 6 1.6861 -5.2628 -0.0277 16 1 1.4928 -5.6322 0.9795 17 7 0.5376 -5.5180 -0.9007 18 6 -0.7349 -5.4159 -0.4054 19 1 -0.8919 -5.1467 0.6286 20 6 -1.8231 -5.6583 -1.2325 21 7 -3.0463 -5.5596 -0.7566 22 14 -1.5515 -6.1231 -3.0212 23 1 -1.4490 -7.5999 -3.1387 24 1 -2.6942 -5.6397 -3.8372 25 1 -0.2955 -5.4994 -3.5095 26 6 2.0279 -3.7581 -0.0009 27 7 2.1450 -1.1500 -0.0005 28 1 -0.3633 -0.0004 1.0277 29 1 -0.3634 0.8901 -0.5134 30 1 -0.3633 -0.8898 -0.5141 31 1 3.9811 2.1508 -0.0001 32 1 4.9728 -5.0263 -0.6179 33 1 4.3028 -5.3132 1.0163 34 1 2.2690 -7.9323 -0.4743 35 1 4.0391 -7.7727 -0.5698 36 1 3.1901 -7.3749 0.9431 37 1 0.6787 -5.7595 -1.8295 38 1 -3.8067 -5.7293 -1.3343 39 1 1.6170 -3.2689 -0.8841 40 1 1.6209 -3.3014 0.9014 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000939262045.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:59:42 Heat of formation + Delta-G solvation = 42.217226 kcal Electronic energy + Delta-G solvation = -25532.364782 eV Core-core repulsion = 21795.418024 eV Total energy + Delta-G solvation = -3736.946758 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.52861 -39.72949 -37.78419 -36.82134 -34.45620 -34.07066 -33.15480 -32.42044 -31.04776 -28.49555 -27.94943 -27.12268 -25.31682 -23.77202 -23.13973 -21.45289 -20.21456 -19.88734 -18.39022 -17.55638 -17.32262 -16.39306 -16.21254 -15.79201 -15.55900 -14.85016 -14.63072 -14.22048 -13.70541 -13.50862 -13.40341 -13.18947 -13.05820 -12.62011 -12.54010 -12.40322 -12.33685 -11.95425 -11.81547 -11.54490 -11.50697 -11.39035 -11.15746 -11.11945 -10.82445 -10.65243 -10.41970 -10.23094 -9.98286 -9.66294 -9.37835 -9.33816 -8.97410 -8.43680 -7.39486 -5.85222 -3.22450 0.15371 0.52533 1.75371 2.65332 2.79197 3.31589 3.34635 3.40486 3.49471 3.60013 3.70714 4.08439 4.38188 4.51459 4.66896 4.84452 5.00042 5.02950 5.13590 5.41882 5.51330 5.53923 5.61965 5.63454 5.69866 5.71914 5.77217 5.82458 6.08440 6.12266 6.15488 6.31705 6.35873 6.46377 6.50349 6.53081 6.80678 7.53454 7.66459 7.89365 8.06759 8.33406 9.10138 9.82588 10.01021 11.32510 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.013157 B = 0.004460 C = 0.003539 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2127.603148 B = 6276.276905 C = 7910.710365 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C 0.322 3.678 3 N -0.495 5.495 4 C 0.164 3.836 5 C -0.113 4.113 6 Cl -0.006 7.006 7 C 0.152 3.848 8 C 0.572 3.428 9 O -0.520 6.520 10 N -0.589 5.589 11 C 0.114 3.886 12 C -0.118 4.118 13 H 0.082 0.918 14 C -0.135 4.135 15 C 0.178 3.822 16 H 0.074 0.926 17 N -0.735 5.735 18 C -0.247 4.247 19 H 0.093 0.907 20 C 0.011 3.989 21 N -0.930 5.930 22 Si 0.880 3.120 23 H -0.283 1.283 24 H -0.291 1.291 25 H -0.278 1.278 26 C 0.088 3.912 27 N -0.464 5.464 28 H 0.093 0.907 29 H 0.088 0.912 30 H 0.100 0.900 31 H 0.183 0.817 32 H 0.076 0.924 33 H 0.072 0.928 34 H 0.067 0.933 35 H 0.051 0.949 36 H 0.056 0.944 37 H 0.363 0.637 38 H 0.260 0.740 39 H 0.082 0.918 40 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.230 9.772 1.847 17.361 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.056 3.944 3 N -0.210 5.210 4 C -0.005 4.005 5 C -0.146 4.146 6 Cl 0.023 6.977 7 C 0.003 3.997 8 C 0.357 3.643 9 O -0.395 6.395 10 N -0.320 5.320 11 C -0.008 4.008 12 C -0.138 4.138 13 H 0.100 0.900 14 C -0.192 4.192 15 C 0.066 3.934 16 H 0.092 0.908 17 N -0.377 5.377 18 C -0.377 4.377 19 H 0.110 0.890 20 C -0.185 4.185 21 N -0.577 5.577 22 Si 0.711 3.289 23 H -0.210 1.210 24 H -0.217 1.217 25 H -0.204 1.204 26 C -0.037 4.037 27 N -0.181 5.181 28 H 0.111 0.889 29 H 0.107 0.893 30 H 0.119 0.881 31 H 0.200 0.800 32 H 0.095 0.905 33 H 0.091 0.909 34 H 0.086 0.914 35 H 0.070 0.930 36 H 0.076 0.924 37 H 0.197 0.803 38 H 0.070 0.930 39 H 0.100 0.900 40 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 13.823 9.783 1.993 17.051 hybrid contribution 1.028 -0.095 -1.338 1.690 sum 14.851 9.687 0.654 17.743 Atomic orbital electron populations 1.20719 0.84129 1.05282 1.04730 1.23595 0.98944 0.82621 0.89218 1.68347 1.08808 1.30573 1.13225 1.23385 0.89319 0.97237 0.90564 1.22834 0.89498 0.95998 1.06301 1.98424 1.04620 1.98621 1.96076 1.21607 0.89794 0.93930 0.94403 1.17294 0.86055 0.81999 0.78939 1.90852 1.11886 1.86211 1.50589 1.48393 1.09586 1.04857 1.69207 1.22357 0.96930 0.80312 1.01201 1.22675 0.95285 0.95077 1.00732 0.89980 1.21626 1.01797 0.94657 1.01142 1.21328 0.86127 0.90565 0.95368 0.90785 1.42692 1.02080 1.83627 1.09268 1.19049 0.80916 1.40458 0.97287 0.88965 1.24638 0.95054 1.01397 0.97453 1.69689 0.97183 1.55371 1.35421 0.86625 0.77051 0.78556 0.86705 1.21002 1.21714 1.20376 1.23376 0.76473 1.00606 1.03219 1.68794 1.07075 1.30253 1.11985 0.88882 0.89301 0.88118 0.80035 0.90520 0.90945 0.91361 0.93025 0.92448 0.80329 0.92964 0.89997 0.91102 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.03 10.31 36.00 0.37 -0.66 16 2 C 0.32 4.36 7.64 -157.32 -1.20 3.16 16 3 N -0.49 -6.17 10.31 -10.70 -0.11 -6.28 16 4 C 0.16 1.79 11.14 -17.14 -0.19 1.60 16 5 C -0.11 -1.47 6.40 -38.79 -0.25 -1.72 16 6 Cl -0.01 -0.08 26.25 -51.86 -1.36 -1.44 16 7 C 0.15 2.30 6.75 -82.61 -0.56 1.75 16 8 C 0.57 9.33 7.85 -12.09 -0.09 9.23 16 9 O -0.52 -9.01 14.40 5.37 0.08 -8.93 16 10 N -0.59 -9.28 3.33 -171.43 -0.57 -9.85 16 11 C 0.11 1.57 6.37 -2.53 -0.02 1.55 16 12 C -0.12 -1.69 3.25 -88.47 -0.29 -1.97 16 13 H 0.08 1.22 8.00 -51.93 -0.42 0.80 16 14 C -0.13 -1.68 9.31 37.16 0.35 -1.34 16 15 C 0.18 3.11 3.06 -66.10 -0.20 2.91 16 16 H 0.07 1.33 8.02 -51.93 -0.42 0.91 16 17 N -0.74 -15.83 4.98 -51.65 -0.26 -16.09 16 18 C -0.25 -6.41 10.46 -15.06 -0.16 -6.57 16 19 H 0.09 2.57 8.06 -52.49 -0.42 2.15 16 20 C 0.01 0.30 5.50 -17.43 -0.10 0.20 16 21 N -0.93 -27.64 13.97 55.49 0.78 -26.86 16 22 Si 0.88 20.98 27.73 -169.99 -4.71 16.26 16 23 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 24 H -0.29 -7.10 7.11 56.52 0.40 -6.70 16 25 H -0.28 -6.26 6.52 56.52 0.37 -5.89 16 26 C 0.09 1.50 5.17 -3.06 -0.02 1.49 16 27 N -0.46 -7.05 6.96 -7.32 -0.05 -7.11 16 28 H 0.09 0.96 8.14 -51.93 -0.42 0.54 16 29 H 0.09 0.86 8.14 -51.93 -0.42 0.44 16 30 H 0.10 1.29 8.14 -51.93 -0.42 0.86 16 31 H 0.18 1.30 8.06 -52.49 -0.42 0.88 16 32 H 0.08 1.02 8.04 -51.93 -0.42 0.60 16 33 H 0.07 0.91 7.99 -51.93 -0.41 0.50 16 34 H 0.07 0.95 8.14 -51.93 -0.42 0.53 16 35 H 0.05 0.55 8.14 -51.93 -0.42 0.12 16 36 H 0.06 0.67 8.07 -51.93 -0.42 0.25 16 37 H 0.36 7.82 5.58 -40.82 -0.23 7.59 16 38 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 39 H 0.08 1.54 7.33 -51.93 -0.38 1.16 16 40 H 0.07 1.24 7.56 -51.93 -0.39 0.85 16 LS Contribution 347.60 15.07 5.24 5.24 Total: -1.00 -30.56 347.60 -8.54 -39.09 By element: Atomic # 1 Polarization: 11.54 SS G_CDS: -5.21 Total: 6.33 kcal Atomic # 6 Polarization: 11.98 SS G_CDS: -2.35 Total: 9.63 kcal Atomic # 7 Polarization: -65.97 SS G_CDS: -0.21 Total: -66.18 kcal Atomic # 8 Polarization: -9.01 SS G_CDS: 0.08 Total: -8.93 kcal Atomic # 14 Polarization: 20.98 SS G_CDS: -4.71 Total: 16.26 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.36 Total: -1.44 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -30.56 -8.54 -39.09 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000939262045.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.311 kcal (2) G-P(sol) polarization free energy of solvation -30.557 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.754 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.537 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.093 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.217 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds