Wall clock time and date at job start Tue Mar 31 2020 13:51:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.35458 * 126.43772 * 2 1 4 4 Cl 1.73601 * 127.23351 * 0.02562 * 3 2 1 5 5 C 1.41543 * 105.52539 * 180.02562 * 3 2 1 6 6 C 1.47673 * 126.46017 * 179.97438 * 5 3 2 7 7 O 1.21578 * 120.00040 * 0.02562 * 6 5 3 8 8 N 1.34772 * 119.99556 * 180.02562 * 6 5 3 9 9 C 1.46507 * 119.99560 * 179.97438 * 8 6 5 10 10 H 1.08993 * 115.51470 * 350.41940 * 9 8 6 11 11 C 1.52995 * 117.44202 * 204.99539 * 9 8 6 12 12 H 1.09001 * 119.53990 * 4.12435 * 11 9 8 13 13 C 1.54390 * 118.12337 * 159.21462 * 11 9 8 14 14 N 1.48140 * 104.61934 * 87.19276 * 13 11 9 15 15 C 1.36935 * 127.83993 * 140.41826 * 14 13 11 16 16 H 1.07995 * 119.99905 * 344.38758 * 15 14 13 17 17 C 1.38814 * 120.00261 * 164.38593 * 15 14 13 18 18 N 1.31620 * 119.99758 * 350.81878 * 17 15 14 19 19 Si 1.86803 * 120.00198 * 170.81056 * 17 15 14 20 20 H 1.48506 * 109.46541 * 94.81492 * 19 17 15 21 21 H 1.48492 * 109.47313 * 214.81587 * 19 17 15 22 22 H 1.48498 * 109.47067 * 334.81692 * 19 17 15 23 23 C 1.48153 * 104.32361 * 320.41591 * 14 13 11 24 24 C 1.52999 * 117.44207 * 135.75740 * 9 8 6 25 25 H 1.09010 * 119.54210 * 355.88323 * 24 9 8 26 26 N 1.31826 * 107.07939 * 359.76886 * 5 3 2 27 27 N 1.28475 * 110.13226 * 0.39173 * 26 5 3 28 28 C 1.46494 * 124.93217 * 179.86339 * 27 26 5 29 29 H 1.08997 * 109.46906 * 269.95767 * 1 2 3 30 30 H 1.08998 * 109.47047 * 29.95619 * 1 2 3 31 31 H 1.09001 * 109.47317 * 149.95733 * 1 2 3 32 32 H 0.96995 * 120.00639 * 359.97438 * 8 6 5 33 33 H 1.09004 * 110.41130 * 205.98135 * 13 11 9 34 34 H 1.09010 * 110.40592 * 328.28965 * 13 11 9 35 35 H 0.97005 * 119.99870 * 180.02562 * 18 17 15 36 36 H 1.08999 * 110.40709 * 158.36837 * 23 14 13 37 37 H 1.08999 * 110.40872 * 280.80257 * 23 14 13 38 38 H 1.09003 * 109.47160 * 269.69874 * 28 27 26 39 39 H 1.08995 * 109.47555 * 29.69422 * 28 27 26 40 40 H 1.09001 * 109.47227 * 149.69863 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3115 1.0898 0.0000 4 17 1.8235 2.7557 0.0006 5 6 3.6337 0.5845 -0.0006 6 6 4.8774 1.3808 -0.0014 7 8 4.8217 2.5953 -0.0011 8 7 6.0742 0.7610 -0.0024 9 6 7.3081 1.5509 -0.0038 10 1 7.1804 2.6209 -0.1675 11 6 8.5649 0.8946 -0.5786 12 1 8.4966 -0.0971 -1.0259 13 6 9.7172 1.8112 -1.0428 14 7 10.5304 2.0354 0.1750 15 6 11.8951 2.0865 0.2761 16 1 12.5106 1.7121 -0.5284 17 6 12.4873 2.6197 1.4127 18 7 11.7499 3.2383 2.3105 19 14 14.3308 2.4592 1.6682 20 1 15.0082 3.6825 1.1679 21 1 14.6173 2.2915 3.1155 22 1 14.8325 1.2761 0.9240 23 6 9.5323 2.1917 1.2586 24 6 8.4273 1.1120 0.9426 25 1 8.2566 0.2823 1.6286 26 7 3.5456 -0.7308 0.0042 27 7 2.3125 -1.0914 -0.0006 28 6 1.8445 -2.4795 -0.0003 29 1 -0.3633 -0.0008 1.0276 30 1 -0.3633 0.8904 -0.5131 31 1 -0.3634 -0.8896 -0.5145 32 1 6.1187 -0.2079 -0.0023 33 1 10.3113 1.3158 -1.8108 34 1 9.3237 2.7559 -1.4185 35 1 12.1638 3.6112 3.1046 36 1 9.9870 1.9832 2.2271 37 1 9.1100 3.1965 1.2444 38 1 1.7278 -2.8238 -1.0279 39 1 2.5720 -3.1082 0.5129 40 1 0.8854 -2.5395 0.5141 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000961919169.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:51:50 Heat of formation + Delta-G solvation = 104.445451 kcal Electronic energy + Delta-G solvation = -24288.146489 eV Core-core repulsion = 20553.898149 eV Total energy + Delta-G solvation = -3734.248340 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -43.05887 -39.53855 -38.05844 -36.64110 -34.42039 -33.95474 -32.90676 -32.46851 -30.24925 -27.98369 -27.39818 -26.94128 -25.59216 -23.65018 -21.58262 -21.22762 -20.35745 -19.70166 -19.21440 -17.60090 -16.90997 -16.82189 -16.67949 -16.05219 -15.11786 -14.70829 -14.58887 -14.29774 -13.92037 -13.84661 -13.52780 -13.29839 -13.15848 -13.08801 -12.80591 -12.68425 -12.16516 -12.01204 -11.67957 -11.49382 -11.39524 -10.94272 -10.80680 -10.79888 -10.29443 -10.14829 -10.14194 -9.89601 -9.70148 -9.49195 -9.12444 -8.97321 -8.69637 -8.24137 -6.82740 -5.76076 -3.10320 1.24990 1.56603 1.64324 2.40914 3.13548 3.32215 3.40979 3.46165 3.48505 3.97105 4.10203 4.40471 4.44729 4.51239 4.53323 4.60020 4.81955 4.98497 5.01641 5.23458 5.23806 5.33243 5.43194 5.47853 5.61530 5.70980 5.87059 5.95271 6.12658 6.23257 6.29417 6.57747 6.74005 6.88313 6.93669 7.36583 7.40960 7.58484 7.71049 7.75852 8.24478 8.32033 9.14512 9.77236 10.54815 11.38233 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.027414 B = 0.002407 C = 0.002297 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1021.127014 B =11627.974987 C =12186.510289 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.023 3.977 3 C -0.103 4.103 4 Cl -0.006 7.006 5 C 0.007 3.993 6 C 0.601 3.399 7 O -0.513 6.513 8 N -0.684 5.684 9 C 0.095 3.905 10 H 0.134 0.866 11 C -0.183 4.183 12 H 0.102 0.898 13 C 0.156 3.844 14 N -0.593 5.593 15 C -0.227 4.227 16 H 0.077 0.923 17 C -0.006 4.006 18 N -0.914 5.914 19 Si 0.913 3.087 20 H -0.288 1.288 21 H -0.290 1.290 22 H -0.280 1.280 23 C 0.188 3.812 24 C -0.182 4.182 25 H 0.105 0.895 26 N -0.248 5.248 27 N -0.279 5.279 28 C 0.087 3.913 29 H 0.084 0.916 30 H 0.090 0.910 31 H 0.075 0.925 32 H 0.403 0.597 33 H 0.051 0.949 34 H 0.028 0.972 35 H 0.255 0.745 36 H 0.089 0.911 37 H 0.031 0.969 38 H 0.088 0.912 39 H 0.101 0.899 40 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.411 -12.417 -4.712 29.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.102 4.102 3 C -0.140 4.140 4 Cl 0.022 6.978 5 C -0.155 4.155 6 C 0.384 3.616 7 O -0.386 6.386 8 N -0.333 5.333 9 C -0.011 4.011 10 H 0.152 0.848 11 C -0.204 4.204 12 H 0.120 0.880 13 C 0.029 3.971 14 N -0.316 5.316 15 C -0.355 4.355 16 H 0.095 0.905 17 C -0.203 4.203 18 N -0.560 5.560 19 Si 0.743 3.257 20 H -0.215 1.215 21 H -0.216 1.216 22 H -0.205 1.205 23 C 0.062 3.938 24 C -0.203 4.203 25 H 0.123 0.877 26 N -0.084 5.084 27 N -0.068 5.068 28 C -0.053 4.053 29 H 0.102 0.898 30 H 0.109 0.891 31 H 0.094 0.906 32 H 0.238 0.762 33 H 0.070 0.930 34 H 0.046 0.954 35 H 0.065 0.935 36 H 0.107 0.893 37 H 0.049 0.951 38 H 0.107 0.893 39 H 0.120 0.880 40 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -25.642 -12.398 -4.560 28.844 hybrid contribution 0.377 -0.051 0.182 0.421 sum -25.265 -12.449 -4.378 28.504 Atomic orbital electron populations 1.20402 0.85755 1.04376 1.03798 1.21108 0.95442 0.85726 1.07912 1.20522 0.91998 0.87903 1.13577 1.98364 1.90762 1.11559 1.97065 1.21900 0.94364 0.89370 1.09817 1.16698 0.81287 0.86509 0.77115 1.90853 1.86269 1.12329 1.49111 1.45205 1.04483 1.10124 1.73444 1.21920 0.78599 0.96165 1.04378 0.84816 1.24266 0.96463 1.01066 0.98591 0.88030 1.21129 0.89975 0.95075 0.90888 1.45126 1.01394 1.83652 1.01437 1.18985 0.79490 1.33660 1.03341 0.90543 1.24912 0.98133 0.98899 0.98379 1.69904 1.34141 1.40130 1.11841 0.86096 0.84683 0.77750 0.77173 1.21494 1.21588 1.20545 1.21648 0.85490 0.91954 0.94706 1.25469 0.98478 1.03808 0.92595 0.87661 1.73626 1.01875 1.13795 1.19077 1.45272 1.02607 1.07414 1.51525 1.22236 1.01884 0.76405 1.04791 0.89782 0.89150 0.90618 0.76221 0.93013 0.95412 0.93526 0.89269 0.95141 0.89333 0.88006 0.88405 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.40 9.75 36.01 0.35 -0.05 16 2 C 0.02 0.21 6.94 -81.90 -0.57 -0.36 16 3 C -0.10 -1.30 6.79 -39.32 -0.27 -1.57 16 4 Cl -0.01 -0.08 27.92 -51.86 -1.45 -1.53 16 5 C 0.01 0.10 7.13 -82.76 -0.59 -0.49 16 6 C 0.60 10.03 7.82 -12.41 -0.10 9.93 16 7 O -0.51 -10.06 15.44 5.30 0.08 -9.98 16 8 N -0.68 -10.69 5.56 -54.81 -0.30 -10.99 16 9 C 0.09 1.71 5.92 -67.93 -0.40 1.31 16 10 H 0.13 2.68 7.40 -51.93 -0.38 2.29 16 11 C -0.18 -3.37 6.98 -89.22 -0.62 -4.00 16 12 H 0.10 1.67 8.14 -51.93 -0.42 1.24 16 13 C 0.16 3.37 7.04 -2.41 -0.02 3.35 16 14 N -0.59 -15.51 3.38 -166.73 -0.56 -16.07 16 15 C -0.23 -6.39 10.35 -15.06 -0.16 -6.55 16 16 H 0.08 2.08 7.84 -52.49 -0.41 1.66 16 17 C -0.01 -0.17 5.40 -17.43 -0.09 -0.27 16 18 N -0.91 -27.20 10.87 55.49 0.60 -26.60 16 19 Si 0.91 22.16 29.56 -169.99 -5.03 17.13 16 20 H -0.29 -6.98 7.11 56.52 0.40 -6.58 16 21 H -0.29 -7.06 7.11 56.52 0.40 -6.66 16 22 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 23 C 0.19 4.68 5.76 -0.57 0.00 4.67 16 24 C -0.18 -3.61 7.34 -87.39 -0.64 -4.25 16 25 H 0.11 1.95 8.14 -51.92 -0.42 1.52 16 26 N -0.25 -2.97 11.66 33.42 0.39 -2.58 16 27 N -0.28 -2.44 3.72 -63.69 -0.24 -2.67 16 28 C 0.09 0.29 10.94 59.84 0.65 0.95 16 29 H 0.08 0.31 8.14 -51.93 -0.42 -0.12 16 30 H 0.09 0.43 8.03 -51.93 -0.42 0.02 16 31 H 0.07 0.17 7.68 -51.93 -0.40 -0.23 16 32 H 0.40 5.45 8.55 -40.82 -0.35 5.10 16 33 H 0.05 1.06 8.14 -51.93 -0.42 0.63 16 34 H 0.03 0.61 8.14 -51.92 -0.42 0.19 16 35 H 0.25 7.31 8.31 -40.82 -0.34 6.97 16 36 H 0.09 2.45 6.52 -51.93 -0.34 2.11 16 37 H 0.03 0.80 8.14 -51.93 -0.42 0.38 16 38 H 0.09 0.17 8.14 -51.93 -0.42 -0.25 16 39 H 0.10 0.29 8.14 -51.93 -0.42 -0.13 16 40 H 0.10 0.07 7.58 -51.93 -0.39 -0.32 16 LS Contribution 354.63 15.07 5.34 5.34 Total: -1.00 -34.80 354.63 -8.82 -43.62 By element: Atomic # 1 Polarization: 6.85 SS G_CDS: -5.21 Total: 1.64 kcal Atomic # 6 Polarization: 5.14 SS G_CDS: -2.45 Total: 2.68 kcal Atomic # 7 Polarization: -58.81 SS G_CDS: -0.11 Total: -58.92 kcal Atomic # 8 Polarization: -10.06 SS G_CDS: 0.08 Total: -9.98 kcal Atomic # 14 Polarization: 22.16 SS G_CDS: -5.03 Total: 17.13 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.45 Total: -1.53 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -34.80 -8.82 -43.62 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000961919169.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 148.066 kcal (2) G-P(sol) polarization free energy of solvation -34.798 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.620 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds