Wall clock time and date at job start Tue Mar 31 2020 13:59:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.31935 * 119.01427 * 2 1 4 4 C 1.32132 * 121.05350 * 179.70487 * 3 2 1 5 5 C 1.38983 * 119.12952 * 0.56800 * 4 3 2 6 6 Cl 1.73599 * 120.89164 * 179.74110 * 5 4 3 7 7 C 1.39639 * 118.22116 * 359.46542 * 5 4 3 8 8 C 1.48372 * 120.55858 * 180.27470 * 7 5 4 9 9 O 1.21485 * 120.00543 * 359.97438 * 8 7 5 10 10 N 1.34778 * 119.99496 * 180.02562 * 8 7 5 11 11 C 1.47021 * 125.65256 * 0.02562 * 10 8 7 12 12 C 1.54327 * 107.27210 * 181.02531 * 11 10 8 13 13 C 1.55158 * 102.94440 * 22.19030 * 12 11 10 14 14 H 1.09000 * 111.00678 * 82.60812 * 13 12 11 15 15 N 1.46499 * 111.00625 * 206.43047 * 13 12 11 16 16 C 1.46499 * 120.00265 * 59.99387 * 15 13 12 17 17 C 1.36936 * 119.99628 * 240.00113 * 15 13 12 18 18 H 1.08003 * 120.00064 * 23.23855 * 17 15 13 19 19 C 1.38811 * 120.00048 * 203.24015 * 17 15 13 20 20 N 1.31620 * 119.99738 * 13.76865 * 19 17 15 21 21 Si 1.86794 * 120.00380 * 193.76354 * 19 17 15 22 22 H 1.48509 * 109.47120 * 0.02562 * 21 19 17 23 23 H 1.48500 * 109.47129 * 120.00146 * 21 19 17 24 24 H 1.48492 * 109.47614 * 240.00332 * 21 19 17 25 25 C 1.47432 * 125.64657 * 179.71583 * 10 8 7 26 26 N 1.31521 * 119.02353 * 180.02562 * 2 1 3 27 27 H 1.08999 * 109.46896 * 269.97363 * 1 2 3 28 28 H 1.08996 * 109.47275 * 29.98119 * 1 2 3 29 29 H 1.09008 * 109.46532 * 149.98243 * 1 2 3 30 30 H 1.08003 * 120.43796 * 180.28230 * 4 3 2 31 31 H 1.08995 * 109.87970 * 300.43739 * 11 10 8 32 32 H 1.09000 * 109.88150 * 61.44935 * 11 10 8 33 33 H 1.08996 * 110.72386 * 140.55355 * 12 11 10 34 34 H 1.08999 * 110.71489 * 263.65251 * 12 11 10 35 35 H 1.08999 * 109.46580 * 95.16337 * 16 15 13 36 36 H 1.09001 * 109.46811 * 215.16033 * 16 15 13 37 37 H 1.09000 * 109.47271 * 335.15985 * 16 15 13 38 38 H 0.97005 * 119.99890 * 179.97438 * 20 19 17 39 39 H 1.09003 * 110.36558 * 274.75095 * 25 10 8 40 40 H 1.08999 * 110.36344 * 37.06761 * 25 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1470 1.1538 0.0000 4 6 3.4674 1.2008 0.0058 5 6 4.1868 0.0116 0.0000 6 17 5.9228 0.0201 0.0005 7 6 3.4758 -1.1902 -0.0004 8 6 4.1914 -2.4900 -0.0003 9 8 5.4060 -2.5148 -0.0005 10 7 3.4938 -3.6432 -0.0012 11 6 2.0280 -3.7580 -0.0028 12 6 1.6863 -5.2628 0.0230 13 6 2.9734 -5.9015 0.6087 14 1 2.9782 -5.8428 1.6971 15 7 3.1228 -7.2879 0.1596 16 6 3.2276 -7.5874 -1.2706 17 6 3.1644 -8.3039 1.0767 18 1 2.7277 -8.1666 2.0549 19 6 3.7680 -9.5102 0.7492 20 7 4.5304 -9.5956 -0.3203 21 14 3.4984 -11.0124 1.8264 22 1 2.6068 -10.6556 2.9591 23 1 2.8696 -12.0913 1.0228 24 1 4.8040 -11.4845 2.3533 25 6 4.0741 -4.9984 -0.0072 26 7 2.1451 -1.1500 -0.0005 27 1 -0.3633 -0.0005 1.0277 28 1 -0.3633 0.8901 -0.5135 29 1 -0.3633 -0.8899 -0.5142 30 1 3.9811 2.1509 0.0104 31 1 1.6170 -3.2694 0.8805 32 1 1.6212 -3.2985 -0.9036 33 1 0.8316 -5.4531 0.6721 34 1 1.4935 -5.6317 -0.9844 35 1 4.2786 -7.6600 -1.5505 36 1 2.7293 -8.5337 -1.4811 37 1 2.7529 -6.7913 -1.8443 38 1 4.9525 -10.4386 -0.5489 39 1 4.2976 -5.3109 -1.0274 40 1 4.9752 -5.0279 0.6054 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000972483967.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:59:14 Heat of formation + Delta-G solvation = 57.165237 kcal Electronic energy + Delta-G solvation = -25198.450489 eV Core-core repulsion = 21462.151925 eV Total energy + Delta-G solvation = -3736.298564 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.64708 -39.58307 -37.55282 -36.84670 -34.93462 -34.24203 -33.32533 -31.61337 -29.78526 -28.72719 -28.09015 -26.16070 -25.94372 -23.89000 -22.91839 -22.27720 -19.97553 -19.33303 -18.46559 -17.33672 -17.05729 -16.45172 -16.18349 -15.74260 -15.49695 -14.95925 -14.64123 -14.08578 -13.86441 -13.42752 -13.29969 -13.20957 -12.83296 -12.70201 -12.44963 -12.37724 -12.10729 -11.98374 -11.78957 -11.60783 -11.27725 -11.24582 -10.92514 -10.79251 -10.53748 -10.52148 -10.26758 -10.24828 -9.88694 -9.80387 -9.48588 -9.31917 -8.61746 -8.35099 -6.82170 -5.78384 -3.26262 0.05234 0.37631 1.70528 2.63401 2.82143 3.35453 3.40417 3.42521 3.44078 3.45155 3.55894 4.03390 4.28197 4.45026 4.58617 4.91418 5.07787 5.18673 5.24040 5.32245 5.41244 5.42169 5.59183 5.65684 5.81784 5.85136 5.95970 6.10888 6.25913 6.31215 6.40604 6.51679 6.59749 6.74876 6.86865 7.30585 7.48130 7.63669 7.68361 7.76566 8.12959 8.33247 9.16378 9.78741 10.27616 11.25845 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.020785 B = 0.003108 C = 0.002817 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1346.805237 B = 9006.845992 C = 9936.183031 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.314 3.686 3 N -0.496 5.496 4 C 0.165 3.835 5 C -0.111 4.111 6 Cl 0.001 6.999 7 C 0.157 3.843 8 C 0.567 3.433 9 O -0.511 6.511 10 N -0.587 5.587 11 C 0.119 3.881 12 C -0.158 4.158 13 C 0.173 3.827 14 H 0.079 0.921 15 N -0.584 5.584 16 C 0.158 3.842 17 C -0.261 4.261 18 H 0.071 0.929 19 C 0.005 3.995 20 N -0.903 5.903 21 Si 0.906 3.094 22 H -0.277 1.277 23 H -0.289 1.289 24 H -0.290 1.290 25 C 0.087 3.913 26 N -0.474 5.474 27 H 0.091 0.909 28 H 0.089 0.911 29 H 0.092 0.908 30 H 0.184 0.816 31 H 0.071 0.929 32 H 0.067 0.933 33 H 0.076 0.924 34 H 0.075 0.925 35 H 0.033 0.967 36 H 0.042 0.958 37 H 0.003 0.997 38 H 0.253 0.747 39 H 0.073 0.927 40 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.872 21.650 -0.681 22.725 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.047 3.953 3 N -0.211 5.211 4 C -0.003 4.003 5 C -0.144 4.144 6 Cl 0.030 6.970 7 C 0.008 3.992 8 C 0.351 3.649 9 O -0.386 6.386 10 N -0.319 5.319 11 C -0.004 4.004 12 C -0.198 4.198 13 C 0.063 3.937 14 H 0.097 0.903 15 N -0.304 5.304 16 C 0.014 3.986 17 C -0.391 4.391 18 H 0.089 0.911 19 C -0.194 4.194 20 N -0.547 5.547 21 Si 0.736 3.264 22 H -0.202 1.202 23 H -0.216 1.216 24 H -0.217 1.217 25 C -0.037 4.037 26 N -0.191 5.191 27 H 0.109 0.891 28 H 0.108 0.892 29 H 0.110 0.890 30 H 0.201 0.799 31 H 0.089 0.911 32 H 0.085 0.915 33 H 0.094 0.906 34 H 0.093 0.907 35 H 0.052 0.948 36 H 0.061 0.939 37 H 0.021 0.979 38 H 0.064 0.936 39 H 0.091 0.909 40 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -6.916 21.430 -0.765 22.532 hybrid contribution 1.054 -0.727 0.437 1.353 sum -5.863 20.703 -0.327 21.520 Atomic orbital electron populations 1.20642 0.84593 1.04746 1.04432 1.23484 0.98730 0.82919 0.90135 1.68307 1.08948 1.30447 1.13382 1.23392 0.89219 0.97341 0.90365 1.22884 0.90015 0.95930 1.05585 1.98446 1.04071 1.98597 1.95917 1.21745 0.89552 0.94285 0.93668 1.17273 0.86247 0.81788 0.79554 1.90887 1.11824 1.85893 1.49971 1.48385 1.08727 1.05742 1.69042 1.22117 0.79128 0.97238 1.01959 1.23309 1.00806 0.92845 1.02825 1.21514 0.90253 0.84712 0.97249 0.90298 1.43869 1.84234 0.99357 1.02932 1.20817 0.99305 0.96152 0.82337 1.19256 1.31290 0.91974 0.96564 0.91140 1.25065 0.97016 0.99275 0.98004 1.70083 1.32269 1.25073 1.27232 0.86164 0.77481 0.82970 0.79778 1.20230 1.21562 1.21675 1.23279 0.99288 0.78804 1.02330 1.68667 1.07477 1.30197 1.12761 0.89062 0.89248 0.88970 0.79932 0.91121 0.91462 0.90577 0.90661 0.94850 0.93900 0.97897 0.93648 0.90886 0.90521 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.56 10.31 36.01 0.37 -0.19 16 2 C 0.31 3.23 7.64 -157.31 -1.20 2.03 16 3 N -0.50 -5.07 10.31 -10.70 -0.11 -5.18 16 4 C 0.17 1.58 11.14 -17.15 -0.19 1.39 16 5 C -0.11 -1.35 6.40 -38.78 -0.25 -1.60 16 6 Cl 0.00 0.01 26.25 -51.86 -1.36 -1.35 16 7 C 0.16 2.19 6.75 -82.61 -0.56 1.63 16 8 C 0.57 9.53 7.85 -12.09 -0.09 9.44 16 9 O -0.51 -9.75 14.40 5.38 0.08 -9.67 16 10 N -0.59 -9.78 3.33 -171.29 -0.57 -10.35 16 11 C 0.12 1.67 5.42 -3.06 -0.02 1.66 16 12 C -0.16 -2.49 6.49 -24.89 -0.16 -2.65 16 13 C 0.17 3.40 3.55 -65.66 -0.23 3.17 16 14 H 0.08 1.57 7.96 -51.93 -0.41 1.16 16 15 N -0.58 -13.99 2.96 -170.90 -0.51 -14.50 16 16 C 0.16 3.74 7.56 59.85 0.45 4.19 16 17 C -0.26 -6.95 9.60 -15.06 -0.14 -7.09 16 18 H 0.07 1.83 7.87 -52.48 -0.41 1.41 16 19 C 0.01 0.15 5.08 -17.43 -0.09 0.06 16 20 N -0.90 -25.80 10.77 55.49 0.60 -25.20 16 21 Si 0.91 21.40 29.58 -169.99 -5.03 16.38 16 22 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 23 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 24 H -0.29 -6.94 7.11 56.52 0.40 -6.54 16 25 C 0.09 1.66 6.46 -2.41 -0.02 1.64 16 26 N -0.47 -5.83 6.96 -7.31 -0.05 -5.89 16 27 H 0.09 0.50 8.14 -51.93 -0.42 0.07 16 28 H 0.09 0.47 8.14 -51.93 -0.42 0.05 16 29 H 0.09 0.55 8.14 -51.92 -0.42 0.12 16 30 H 0.18 1.09 8.06 -52.48 -0.42 0.67 16 31 H 0.07 0.93 7.44 -51.93 -0.39 0.55 16 32 H 0.07 0.89 7.56 -51.93 -0.39 0.50 16 33 H 0.08 1.11 8.14 -51.93 -0.42 0.69 16 34 H 0.07 1.23 6.47 -51.93 -0.34 0.90 16 35 H 0.03 0.87 7.33 -51.93 -0.38 0.49 16 36 H 0.04 1.09 7.38 -51.93 -0.38 0.70 16 37 H 0.00 0.05 6.37 -51.93 -0.33 -0.28 16 38 H 0.25 7.03 8.31 -40.82 -0.34 6.69 16 39 H 0.07 1.48 6.96 -51.93 -0.36 1.12 16 40 H 0.08 1.58 8.03 -51.93 -0.42 1.17 16 LS Contribution 342.42 15.07 5.16 5.16 Total: -1.00 -30.90 342.42 -8.98 -39.88 By element: Atomic # 1 Polarization: 2.11 SS G_CDS: -5.06 Total: -2.95 kcal Atomic # 6 Polarization: 15.81 SS G_CDS: -2.13 Total: 13.68 kcal Atomic # 7 Polarization: -60.48 SS G_CDS: -0.64 Total: -61.12 kcal Atomic # 8 Polarization: -9.75 SS G_CDS: 0.08 Total: -9.67 kcal Atomic # 14 Polarization: 21.40 SS G_CDS: -5.03 Total: 16.38 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -1.36 Total: -1.35 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -30.90 -8.98 -39.88 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000972483967.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.049 kcal (2) G-P(sol) polarization free energy of solvation -30.903 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.147 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.981 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.884 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.165 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds