Wall clock time and date at job start Tue Mar 31 2020 13:59:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.31927 * 119.01717 * 2 1 4 4 C 1.32134 * 121.05486 * 180.02562 * 3 2 1 5 5 C 1.38991 * 119.12497 * 359.97438 * 4 3 2 6 6 Cl 1.73599 * 120.88363 * 180.02562 * 5 4 3 7 7 C 1.39629 * 118.22937 * 0.02562 * 5 4 3 8 8 C 1.48366 * 120.56553 * 179.97438 * 7 5 4 9 9 O 1.21485 * 119.99712 * 0.02562 * 8 7 5 10 10 N 1.34774 * 119.99912 * 179.97438 * 8 7 5 11 11 C 1.47425 * 125.65138 * 0.02860 * 10 8 7 12 12 C 1.54908 * 104.92961 * 204.15299 * 11 10 8 13 13 H 1.08999 * 111.00647 * 204.85975 * 12 11 10 14 14 N 1.46505 * 111.00088 * 81.00982 * 12 11 10 15 15 C 1.36935 * 119.99890 * 86.45669 * 14 12 11 16 16 H 1.08001 * 120.00526 * 359.97438 * 15 14 12 17 17 C 1.38818 * 120.00071 * 179.97438 * 15 14 12 18 18 N 1.31619 * 120.00219 * 179.97438 * 17 15 14 19 19 Si 1.86801 * 119.99766 * 0.02562 * 17 15 14 20 20 H 1.48493 * 109.47213 * 89.99677 * 19 17 15 21 21 H 1.48501 * 109.46787 * 210.00335 * 19 17 15 22 22 H 1.48504 * 109.47057 * 329.99558 * 19 17 15 23 23 C 1.55154 * 101.58289 * 322.93718 * 12 11 10 24 24 C 1.47290 * 125.79121 * 180.02562 * 10 8 7 25 25 H 1.09001 * 109.98500 * 59.43402 * 24 10 8 26 26 C 1.52996 * 109.87458 * 298.35971 * 24 10 8 27 27 N 1.31524 * 119.02023 * 180.29790 * 2 1 3 28 28 H 1.09003 * 109.47362 * 90.00077 * 1 2 3 29 29 H 1.08998 * 109.47440 * 209.99942 * 1 2 3 30 30 H 1.09004 * 109.47259 * 330.00014 * 1 2 3 31 31 H 1.08005 * 120.43894 * 180.02562 * 4 3 2 32 32 H 1.09002 * 110.36696 * 85.25946 * 11 10 8 33 33 H 1.08995 * 110.36608 * 323.04783 * 11 10 8 34 34 H 0.97002 * 120.00176 * 266.45171 * 14 12 11 35 35 H 0.96990 * 119.99830 * 180.02562 * 18 17 15 36 36 H 1.09002 * 110.72290 * 153.86663 * 23 12 11 37 37 H 1.08994 * 110.71922 * 276.96131 * 23 12 11 38 38 H 1.08998 * 109.47192 * 302.15553 * 26 24 10 39 39 H 1.09005 * 109.47110 * 62.15753 * 26 24 10 40 40 H 1.09003 * 109.47228 * 182.15088 * 26 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1469 1.1537 0.0000 4 6 3.4674 1.2007 -0.0005 5 6 4.1867 0.0113 -0.0005 6 17 5.9226 0.0198 -0.0005 7 6 3.4757 -1.1904 -0.0005 8 6 4.1911 -2.4903 -0.0011 9 8 5.4057 -2.5151 -0.0011 10 7 3.4934 -3.6434 -0.0006 11 6 2.0237 -3.7585 0.0000 12 6 1.7326 -5.1510 0.6129 13 1 0.7664 -5.5302 0.2801 14 7 1.8011 -5.1056 2.0756 15 6 0.6956 -4.7517 2.8021 16 1 -0.2267 -4.5056 2.2968 17 6 0.7602 -4.7092 4.1881 18 7 -0.3022 -4.3685 4.8864 19 14 2.3555 -5.1341 5.0621 20 1 3.1686 -3.9035 5.2342 21 1 2.0504 -5.7163 6.3937 22 1 3.1156 -6.1205 4.2531 23 6 2.8937 -5.9977 0.0278 24 6 4.0698 -4.9988 -0.0005 25 1 4.6953 -5.1377 0.8813 26 6 4.9017 -5.2103 -1.2669 27 7 2.1450 -1.1501 -0.0060 28 1 -0.3634 0.0000 -1.0277 29 1 -0.3634 -0.8900 0.5138 30 1 -0.3634 0.8900 0.5138 31 1 3.9811 2.1507 -0.0001 32 1 1.6385 -3.7041 -1.0183 33 1 1.5820 -2.9738 0.6142 34 1 2.6294 -5.3264 2.5295 35 1 -0.2568 -4.3384 5.8547 36 1 3.1208 -6.8425 0.6782 37 1 2.6518 -6.3412 -0.9779 38 1 4.2746 -5.0524 -2.1443 39 1 5.7301 -4.5019 -1.2800 40 1 5.2935 -6.2275 -1.2786 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000989526380.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:59:31 Heat of formation + Delta-G solvation = 45.320499 kcal Electronic energy + Delta-G solvation = -26031.099437 eV Core-core repulsion = 22294.287247 eV Total energy + Delta-G solvation = -3736.812190 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.45689 -39.74519 -37.59435 -36.71523 -34.28942 -34.09408 -33.09897 -31.57022 -31.34268 -28.98420 -28.46046 -26.07738 -25.42982 -23.63394 -23.34591 -21.91733 -20.13077 -19.46948 -18.23750 -17.68625 -17.12467 -16.40154 -16.19302 -15.72957 -15.26242 -14.70689 -14.49924 -14.06217 -13.89489 -13.70924 -13.38390 -13.04393 -12.97214 -12.69861 -12.42191 -12.31403 -12.12785 -11.98485 -11.88905 -11.52021 -11.49751 -11.34485 -11.07426 -11.02288 -10.83981 -10.65587 -10.38079 -10.10528 -9.98699 -9.64844 -9.29859 -9.24459 -8.93531 -8.33887 -7.33124 -5.83562 -3.19386 0.25321 0.60271 1.84569 2.76856 2.90351 3.33371 3.37641 3.42663 3.58644 3.68359 3.78089 4.18676 4.47248 4.54005 4.75550 4.92514 5.04706 5.11607 5.20386 5.30773 5.47691 5.49287 5.54440 5.62561 5.67877 5.72823 5.77680 5.91255 6.12150 6.14394 6.18083 6.25752 6.37832 6.45781 6.55535 6.58534 6.86893 7.67388 7.74512 7.91464 8.21135 8.35470 9.12871 9.85918 10.04635 11.34231 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.010700 B = 0.005414 C = 0.004600 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2616.073397 B = 5170.494348 C = 6085.154650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C 0.320 3.680 3 N -0.496 5.496 4 C 0.164 3.836 5 C -0.113 4.113 6 Cl -0.006 7.006 7 C 0.157 3.843 8 C 0.575 3.425 9 O -0.519 6.519 10 N -0.575 5.575 11 C 0.071 3.929 12 C 0.170 3.830 13 H 0.080 0.920 14 N -0.737 5.737 15 C -0.245 4.245 16 H 0.093 0.907 17 C 0.010 3.990 18 N -0.930 5.930 19 Si 0.879 3.121 20 H -0.286 1.286 21 H -0.290 1.290 22 H -0.277 1.277 23 C -0.140 4.140 24 C 0.136 3.864 25 H 0.074 0.926 26 C -0.159 4.159 27 N -0.463 5.463 28 H 0.089 0.911 29 H 0.098 0.902 30 H 0.089 0.911 31 H 0.182 0.818 32 H 0.058 0.942 33 H 0.112 0.888 34 H 0.362 0.638 35 H 0.260 0.740 36 H 0.083 0.917 37 H 0.080 0.920 38 H 0.055 0.945 39 H 0.066 0.934 40 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.769 6.971 -14.434 17.400 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.054 3.946 3 N -0.210 5.210 4 C -0.005 4.005 5 C -0.146 4.146 6 Cl 0.023 6.977 7 C 0.007 3.993 8 C 0.360 3.640 9 O -0.395 6.395 10 N -0.307 5.307 11 C -0.054 4.054 12 C 0.059 3.941 13 H 0.098 0.902 14 N -0.379 5.379 15 C -0.374 4.374 16 H 0.111 0.889 17 C -0.187 4.187 18 N -0.577 5.577 19 Si 0.709 3.291 20 H -0.213 1.213 21 H -0.216 1.216 22 H -0.203 1.203 23 C -0.179 4.179 24 C 0.033 3.967 25 H 0.092 0.908 26 C -0.218 4.218 27 N -0.180 5.180 28 H 0.108 0.892 29 H 0.117 0.883 30 H 0.108 0.892 31 H 0.199 0.801 32 H 0.076 0.924 33 H 0.130 0.870 34 H 0.194 0.806 35 H 0.070 0.930 36 H 0.102 0.898 37 H 0.098 0.902 38 H 0.074 0.926 39 H 0.085 0.915 40 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 6.371 7.017 -14.338 17.187 hybrid contribution 2.197 -0.105 0.883 2.370 sum 8.568 6.912 -13.454 17.384 Atomic orbital electron populations 1.20687 0.84417 1.05428 1.04149 1.23559 0.98878 0.82796 0.89382 1.68314 1.08823 1.30560 1.13347 1.23361 0.89319 0.97216 0.90570 1.22824 0.89519 0.96006 1.06278 1.98421 1.04624 1.98621 1.96076 1.21623 0.89737 0.94007 0.93893 1.17217 0.86056 0.81891 0.78874 1.90830 1.11918 1.86156 1.50596 1.48364 1.09137 1.04361 1.68813 1.23702 0.78074 1.02968 1.00651 1.21383 0.96476 0.91372 0.84880 0.90247 1.42691 1.12076 1.82874 1.00264 1.19030 0.90784 1.38638 0.88972 0.88880 1.24631 0.96557 1.01346 0.96128 1.69683 1.27893 1.54176 1.05972 0.86643 0.84523 0.78331 0.79582 1.21260 1.21633 1.20307 1.23081 0.95203 0.97690 1.01946 1.21637 0.95354 0.81180 0.98517 0.90754 1.22128 1.00565 1.02072 0.96986 1.68760 1.07194 1.29853 1.12232 0.89238 0.88285 0.89210 0.80080 0.92396 0.86969 0.80557 0.93026 0.89818 0.90157 0.92621 0.91452 0.91763 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.97 10.31 36.00 0.37 -0.59 16 2 C 0.32 4.47 7.64 -157.31 -1.20 3.27 16 3 N -0.50 -6.56 10.31 -10.70 -0.11 -6.67 16 4 C 0.16 1.97 11.14 -17.14 -0.19 1.78 16 5 C -0.11 -1.62 6.40 -38.78 -0.25 -1.86 16 6 Cl -0.01 -0.09 26.25 -51.86 -1.36 -1.45 16 7 C 0.16 2.57 6.75 -82.61 -0.56 2.01 16 8 C 0.57 10.15 7.65 -12.09 -0.09 10.06 16 9 O -0.52 -9.67 13.22 5.38 0.07 -9.59 16 10 N -0.58 -9.67 3.07 -163.73 -0.50 -10.17 16 11 C 0.07 1.18 5.65 -2.53 -0.01 1.17 16 12 C 0.17 2.96 3.69 -65.78 -0.24 2.72 16 13 H 0.08 1.35 8.13 -51.93 -0.42 0.92 16 14 N -0.74 -16.41 5.07 -51.35 -0.26 -16.67 16 15 C -0.24 -6.50 10.47 -15.06 -0.16 -6.65 16 16 H 0.09 2.61 8.06 -52.49 -0.42 2.18 16 17 C 0.01 0.27 5.50 -17.43 -0.10 0.18 16 18 N -0.93 -28.33 13.97 55.49 0.78 -27.55 16 19 Si 0.88 22.07 27.74 -169.99 -4.71 17.36 16 20 H -0.29 -7.35 7.11 56.52 0.40 -6.95 16 21 H -0.29 -7.37 7.11 56.52 0.40 -6.97 16 22 H -0.28 -6.54 6.52 56.52 0.37 -6.17 16 23 C -0.14 -1.97 6.04 -24.90 -0.15 -2.12 16 24 C 0.14 2.05 3.46 -66.81 -0.23 1.82 16 25 H 0.07 1.23 8.14 -51.93 -0.42 0.80 16 26 C -0.16 -2.04 9.10 37.16 0.34 -1.70 16 27 N -0.46 -7.34 6.69 -7.32 -0.05 -7.39 16 28 H 0.09 0.78 8.14 -51.93 -0.42 0.36 16 29 H 0.10 1.18 8.14 -51.93 -0.42 0.76 16 30 H 0.09 0.87 8.14 -51.93 -0.42 0.45 16 31 H 0.18 1.49 8.06 -52.48 -0.42 1.06 16 32 H 0.06 0.85 8.14 -51.93 -0.42 0.43 16 33 H 0.11 2.14 5.92 -51.93 -0.31 1.83 16 34 H 0.36 8.24 5.68 -40.82 -0.23 8.00 16 35 H 0.26 7.61 8.31 -40.82 -0.34 7.27 16 36 H 0.08 1.17 8.14 -51.93 -0.42 0.75 16 37 H 0.08 0.93 7.86 -51.93 -0.41 0.52 16 38 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 39 H 0.07 0.97 6.92 -51.93 -0.36 0.61 16 40 H 0.06 0.69 8.14 -51.93 -0.42 0.27 16 LS Contribution 344.93 15.07 5.20 5.20 Total: -1.00 -31.95 344.93 -8.55 -40.50 By element: Atomic # 1 Polarization: 11.50 SS G_CDS: -5.12 Total: 6.37 kcal Atomic # 6 Polarization: 12.54 SS G_CDS: -2.47 Total: 10.07 kcal Atomic # 7 Polarization: -68.31 SS G_CDS: -0.15 Total: -68.45 kcal Atomic # 8 Polarization: -9.67 SS G_CDS: 0.07 Total: -9.59 kcal Atomic # 14 Polarization: 22.07 SS G_CDS: -4.71 Total: 17.36 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.36 Total: -1.45 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -31.95 -8.55 -40.50 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000989526380.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.823 kcal (2) G-P(sol) polarization free energy of solvation -31.950 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.873 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.553 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.503 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds