Wall clock time and date at job start Tue Mar 31 2020 13:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.31934 * 119.01851 * 2 1 4 4 C 1.32131 * 121.05725 * 179.97438 * 3 2 1 5 5 C 1.38989 * 119.12565 * 359.97438 * 4 3 2 6 6 Cl 1.73592 * 120.88867 * 180.02562 * 5 4 3 7 7 C 1.39636 * 118.22717 * 0.02562 * 5 4 3 8 8 C 1.48362 * 120.56459 * 180.02562 * 7 5 4 9 9 O 1.21490 * 120.00193 * 359.97438 * 8 7 5 10 10 N 1.34780 * 120.00364 * 179.97438 * 8 7 5 11 11 C 1.47426 * 125.64215 * 359.69171 * 10 8 7 12 12 C 1.55137 * 104.71799 * 155.82016 * 11 10 8 13 13 H 1.08998 * 111.22374 * 279.17466 * 12 11 10 14 14 N 1.46497 * 110.90323 * 155.27522 * 12 11 10 15 15 C 1.36939 * 119.99944 * 92.97713 * 14 12 11 16 16 H 1.07995 * 120.00207 * 359.97438 * 15 14 12 17 17 C 1.38813 * 119.99926 * 179.97438 * 15 14 12 18 18 N 1.31622 * 119.99992 * 359.97438 * 17 15 14 19 19 Si 1.86801 * 120.00217 * 180.02562 * 17 15 14 20 20 H 1.48505 * 109.47089 * 359.97438 * 19 17 15 21 21 H 1.48491 * 109.47435 * 119.99804 * 19 17 15 22 22 H 1.48503 * 109.47008 * 239.99841 * 19 17 15 23 23 C 1.55147 * 101.48576 * 37.29385 * 12 11 10 24 24 C 1.47017 * 125.65105 * 180.02562 * 10 8 7 25 25 H 1.08999 * 109.88492 * 300.43642 * 24 10 8 26 26 C 1.53001 * 109.88537 * 61.44867 * 24 10 8 27 27 N 1.31517 * 119.02076 * 179.97438 * 2 1 3 28 28 H 1.08996 * 109.46992 * 90.00037 * 1 2 3 29 29 H 1.08998 * 109.47387 * 210.00196 * 1 2 3 30 30 H 1.09001 * 109.47073 * 330.00356 * 1 2 3 31 31 H 1.08004 * 120.43944 * 179.97438 * 4 3 2 32 32 H 1.08998 * 110.36828 * 274.74228 * 11 10 8 33 33 H 1.08994 * 110.37119 * 37.07386 * 11 10 8 34 34 H 0.97000 * 120.00117 * 272.97322 * 14 12 11 35 35 H 0.97007 * 120.00109 * 180.02562 * 18 17 15 36 36 H 1.08996 * 110.72167 * 205.96629 * 23 12 11 37 37 H 1.09006 * 110.72100 * 82.69798 * 23 12 11 38 38 H 1.09003 * 109.47007 * 58.54867 * 26 24 10 39 39 H 1.09005 * 109.46833 * 178.54834 * 26 24 10 40 40 H 1.09000 * 109.46932 * 298.55050 * 26 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1470 1.1537 0.0000 4 6 3.4675 1.2007 0.0005 5 6 4.1867 0.0114 0.0016 6 17 5.9226 0.0198 0.0030 7 6 3.4757 -1.1904 0.0015 8 6 4.1911 -2.4902 0.0032 9 8 5.4057 -2.5151 0.0042 10 7 3.4935 -3.6434 0.0037 11 6 2.0238 -3.7584 0.0091 12 6 1.7352 -5.1526 -0.6071 13 1 1.7854 -5.1210 -1.6954 14 7 0.4377 -5.6638 -0.1586 15 6 -0.6847 -5.4357 -0.9092 16 1 -0.6134 -4.8785 -1.8316 17 6 -1.9141 -5.9206 -0.4845 18 7 -2.0009 -6.6001 0.6394 19 14 -3.4451 -5.6100 -1.5088 20 1 -3.0816 -4.8280 -2.7178 21 1 -4.0385 -6.9081 -1.9183 22 1 -4.4324 -4.8463 -0.7042 23 6 2.8980 -5.9960 -0.0210 24 6 4.0722 -4.9949 0.0059 25 1 4.6965 -5.1323 -0.8770 26 6 4.9077 -5.2012 1.2709 27 7 2.1450 -1.1500 0.0005 28 1 -0.3633 0.0000 -1.0276 29 1 -0.3634 -0.8899 0.5138 30 1 -0.3633 0.8900 0.5138 31 1 3.9812 2.1508 0.0001 32 1 1.6428 -3.7057 1.0290 33 1 1.5796 -2.9740 -0.6037 34 1 0.3735 -6.1640 0.6700 35 1 -2.8600 -6.9393 0.9360 36 1 3.1265 -6.8414 -0.6700 37 1 2.6583 -6.3358 0.9866 38 1 4.2792 -5.0548 2.1493 39 1 5.3122 -6.2134 1.2781 40 1 5.7269 -4.4824 1.2864 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000989526382.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:59:37 Heat of formation + Delta-G solvation = 40.877705 kcal Electronic energy + Delta-G solvation = -25551.742664 eV Core-core repulsion = 21814.737820 eV Total energy + Delta-G solvation = -3737.004844 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.54038 -39.74829 -37.53391 -36.78185 -34.36986 -34.18327 -33.16931 -31.51051 -31.28081 -28.52521 -28.42912 -26.10995 -25.30041 -23.90194 -23.44707 -21.71760 -20.27655 -19.48755 -18.30333 -17.32335 -17.16482 -16.43497 -16.19534 -15.78691 -15.29587 -14.82644 -14.47237 -14.02951 -13.77628 -13.65900 -13.32785 -13.09757 -13.05867 -12.62102 -12.45338 -12.29798 -12.17148 -11.95179 -11.83311 -11.57493 -11.40405 -11.18175 -11.10894 -11.03633 -10.78776 -10.66083 -10.26712 -10.06527 -9.99051 -9.77929 -9.37644 -9.28474 -8.92358 -8.36477 -7.07885 -5.85600 -3.15776 0.16313 0.51539 1.76393 2.69084 2.84098 3.37943 3.44328 3.46325 3.50791 3.59977 3.70120 4.10922 4.38608 4.51860 4.72998 4.95569 5.10127 5.18740 5.22377 5.47991 5.49248 5.57354 5.58564 5.62693 5.76305 5.77681 5.84668 6.09096 6.11185 6.16877 6.29379 6.35955 6.40886 6.48464 6.57884 6.74263 6.87512 7.61754 7.63791 7.68905 8.14447 8.31961 9.43964 9.97906 10.33084 11.36531 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.013266 B = 0.004303 C = 0.003361 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2110.142280 B = 6505.277607 C = 8329.849002 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C 0.320 3.680 3 N -0.496 5.496 4 C 0.164 3.836 5 C -0.114 4.114 6 Cl -0.005 7.005 7 C 0.154 3.846 8 C 0.571 3.429 9 O -0.519 6.519 10 N -0.582 5.582 11 C 0.075 3.925 12 C 0.169 3.831 13 H 0.066 0.934 14 N -0.710 5.710 15 C -0.244 4.244 16 H 0.073 0.927 17 C -0.008 4.008 18 N -0.930 5.930 19 Si 0.906 3.094 20 H -0.280 1.280 21 H -0.291 1.291 22 H -0.291 1.291 23 C -0.139 4.139 24 C 0.138 3.862 25 H 0.075 0.925 26 C -0.161 4.161 27 N -0.465 5.465 28 H 0.093 0.907 29 H 0.098 0.902 30 H 0.088 0.912 31 H 0.183 0.817 32 H 0.068 0.932 33 H 0.097 0.903 34 H 0.387 0.613 35 H 0.256 0.744 36 H 0.079 0.921 37 H 0.078 0.922 38 H 0.056 0.944 39 H 0.064 0.936 40 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.069 12.700 -0.191 17.521 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.054 3.946 3 N -0.211 5.211 4 C -0.005 4.005 5 C -0.147 4.147 6 Cl 0.024 6.976 7 C 0.005 3.995 8 C 0.356 3.644 9 O -0.395 6.395 10 N -0.314 5.314 11 C -0.050 4.050 12 C 0.057 3.943 13 H 0.084 0.916 14 N -0.350 5.350 15 C -0.375 4.375 16 H 0.091 0.909 17 C -0.205 4.205 18 N -0.577 5.577 19 Si 0.737 3.263 20 H -0.205 1.205 21 H -0.219 1.219 22 H -0.218 1.218 23 C -0.178 4.178 24 C 0.035 3.965 25 H 0.093 0.907 26 C -0.219 4.219 27 N -0.182 5.182 28 H 0.111 0.889 29 H 0.117 0.883 30 H 0.107 0.893 31 H 0.199 0.801 32 H 0.086 0.914 33 H 0.115 0.885 34 H 0.221 0.779 35 H 0.066 0.934 36 H 0.097 0.903 37 H 0.097 0.903 38 H 0.075 0.925 39 H 0.083 0.917 40 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 11.748 12.708 -0.321 17.310 hybrid contribution 0.089 0.117 -0.155 0.214 sum 11.837 12.825 -0.476 17.459 Atomic orbital electron populations 1.20708 0.84297 1.05107 1.04726 1.23601 0.98919 0.82754 0.89306 1.68333 1.08836 1.30551 1.13335 1.23381 0.89307 0.97257 0.90519 1.22833 0.89566 0.95979 1.06277 1.98424 1.04539 1.98618 1.96064 1.21685 0.89726 0.94080 0.94009 1.17277 0.86087 0.81930 0.79085 1.90834 1.11889 1.86171 1.50573 1.48508 1.09645 1.04514 1.68761 1.23888 0.76418 1.02165 1.02564 1.21416 0.85985 0.89956 0.96987 0.91555 1.42298 1.01496 1.64103 1.27067 1.19289 0.85963 1.29172 1.03073 0.90940 1.24743 0.97730 1.00502 0.97498 1.69670 1.24429 1.41231 1.22417 0.86143 0.83441 0.77409 0.79324 1.20472 1.21850 1.21779 1.23070 0.94596 0.97355 1.02731 1.21620 0.95345 0.80976 0.98574 0.90662 1.22133 1.00448 1.02097 0.97222 1.68836 1.07167 1.29862 1.12304 0.88882 0.88315 0.89301 0.80052 0.91384 0.88454 0.77897 0.93435 0.90255 0.90343 0.92504 0.91681 0.91513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.97 10.31 36.01 0.37 -0.60 16 2 C 0.32 4.22 7.64 -157.31 -1.20 3.02 16 3 N -0.50 -6.05 10.31 -10.70 -0.11 -6.16 16 4 C 0.16 1.77 11.14 -17.14 -0.19 1.58 16 5 C -0.11 -1.46 6.40 -38.78 -0.25 -1.71 16 6 Cl -0.01 -0.07 26.25 -51.86 -1.36 -1.43 16 7 C 0.15 2.32 6.75 -82.61 -0.56 1.76 16 8 C 0.57 9.34 7.64 -12.09 -0.09 9.24 16 9 O -0.52 -8.93 13.17 5.37 0.07 -8.86 16 10 N -0.58 -9.37 3.06 -163.79 -0.50 -9.87 16 11 C 0.07 1.31 5.68 -2.41 -0.01 1.29 16 12 C 0.17 3.14 3.73 -65.67 -0.24 2.90 16 13 H 0.07 1.27 8.09 -51.93 -0.42 0.85 16 14 N -0.71 -16.47 5.24 -51.24 -0.27 -16.74 16 15 C -0.24 -6.31 9.96 -15.06 -0.15 -6.46 16 16 H 0.07 1.83 7.83 -52.49 -0.41 1.42 16 17 C -0.01 -0.22 5.50 -17.43 -0.10 -0.32 16 18 N -0.93 -26.67 13.06 55.49 0.72 -25.95 16 19 Si 0.91 21.27 29.55 -169.99 -5.02 16.24 16 20 H -0.28 -6.35 7.11 56.52 0.40 -5.94 16 21 H -0.29 -6.95 7.11 56.52 0.40 -6.55 16 22 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 23 C -0.14 -2.14 6.13 -24.90 -0.15 -2.29 16 24 C 0.14 2.02 3.45 -66.95 -0.23 1.79 16 25 H 0.08 1.07 8.14 -51.93 -0.42 0.65 16 26 C -0.16 -2.16 9.11 37.16 0.34 -1.82 16 27 N -0.46 -6.96 6.68 -7.31 -0.05 -7.01 16 28 H 0.09 0.92 8.14 -51.93 -0.42 0.50 16 29 H 0.10 1.15 8.14 -51.93 -0.42 0.73 16 30 H 0.09 0.80 8.14 -51.93 -0.42 0.37 16 31 H 0.18 1.28 8.06 -52.48 -0.42 0.85 16 32 H 0.07 1.28 8.14 -51.93 -0.42 0.86 16 33 H 0.10 1.75 5.90 -51.93 -0.31 1.45 16 34 H 0.39 9.58 7.76 -40.82 -0.32 9.26 16 35 H 0.26 7.13 8.31 -40.82 -0.34 6.79 16 36 H 0.08 1.13 8.14 -51.93 -0.42 0.71 16 37 H 0.08 1.23 7.72 -51.93 -0.40 0.83 16 38 H 0.06 0.79 8.14 -51.93 -0.42 0.36 16 39 H 0.06 0.74 8.14 -51.93 -0.42 0.32 16 40 H 0.07 0.96 6.87 -51.93 -0.36 0.61 16 LS Contribution 347.77 15.07 5.24 5.24 Total: -1.00 -29.65 347.77 -8.90 -38.55 By element: Atomic # 1 Polarization: 12.75 SS G_CDS: -5.15 Total: 7.60 kcal Atomic # 6 Polarization: 10.85 SS G_CDS: -2.47 Total: 8.38 kcal Atomic # 7 Polarization: -65.52 SS G_CDS: -0.21 Total: -65.72 kcal Atomic # 8 Polarization: -8.93 SS G_CDS: 0.07 Total: -8.86 kcal Atomic # 14 Polarization: 21.27 SS G_CDS: -5.02 Total: 16.24 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.36 Total: -1.43 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -29.65 -8.90 -38.55 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000989526382.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.427 kcal (2) G-P(sol) polarization free energy of solvation -29.650 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.777 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.899 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.549 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.878 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds