Wall clock time and date at job start Tue Mar 31 2020 13:59:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 N 1.31927 * 119.02169 * 2 1 4 4 C 1.32133 * 121.05896 * 180.02562 * 3 2 1 5 5 C 1.38989 * 119.12763 * 0.02562 * 4 3 2 6 6 Cl 1.73593 * 120.88633 * 180.02562 * 5 4 3 7 7 C 1.39632 * 118.22366 * 359.97438 * 5 4 3 8 8 C 1.48371 * 120.56148 * 180.02562 * 7 5 4 9 9 O 1.21492 * 119.99921 * 39.80459 * 8 7 5 10 10 N 1.34772 * 119.99834 * 219.80709 * 8 7 5 11 11 C 1.46924 * 120.63118 * 356.08395 * 10 8 7 12 12 C 1.53193 * 108.77668 * 126.41305 * 11 10 8 13 13 C 1.53037 * 109.31068 * 54.63535 * 12 11 10 14 14 C 1.53035 * 109.53860 * 298.63372 * 13 12 11 15 15 H 1.09003 * 109.50142 * 301.38358 * 14 13 12 16 16 N 1.46507 * 109.49963 * 181.32004 * 14 13 12 17 17 C 1.36934 * 120.00168 * 155.00219 * 16 14 13 18 18 H 1.08004 * 120.00170 * 0.02562 * 17 16 14 19 19 C 1.38806 * 120.00194 * 180.02562 * 17 16 14 20 20 N 1.31622 * 120.00366 * 179.72725 * 19 17 16 21 21 Si 1.86803 * 120.00096 * 359.97438 * 19 17 16 22 22 H 1.48499 * 109.46986 * 90.00079 * 21 19 17 23 23 H 1.48496 * 109.47529 * 210.00418 * 21 19 17 24 24 H 1.48503 * 109.46716 * 330.00616 * 21 19 17 25 25 C 1.46930 * 120.62929 * 176.10543 * 10 8 7 26 26 N 1.31529 * 119.01958 * 180.30487 * 2 1 3 27 27 H 1.08994 * 109.47636 * 89.99720 * 1 2 3 28 28 H 1.09005 * 109.47258 * 209.99829 * 1 2 3 29 29 H 1.08998 * 109.47189 * 329.98935 * 1 2 3 30 30 H 1.08005 * 120.43481 * 180.02562 * 4 3 2 31 31 H 1.08997 * 109.58958 * 6.62671 * 11 10 8 32 32 H 1.09003 * 109.70497 * 246.26913 * 11 10 8 33 33 H 1.08997 * 109.49651 * 294.68416 * 12 11 10 34 34 H 1.09001 * 109.49749 * 174.58379 * 12 11 10 35 35 H 1.09004 * 109.45780 * 178.61319 * 13 12 11 36 36 H 1.08999 * 109.45519 * 58.65012 * 13 12 11 37 37 H 0.96999 * 120.00054 * 334.99766 * 16 14 13 38 38 H 0.96997 * 120.00052 * 180.02562 * 20 19 17 39 39 H 1.09001 * 109.58478 * 113.79852 * 25 10 8 40 40 H 1.08993 * 109.58411 * 353.37149 * 25 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1470 1.1536 0.0000 4 6 3.4675 1.2006 -0.0005 5 6 4.1868 0.0113 -0.0016 6 17 5.9227 0.0197 -0.0016 7 6 3.4757 -1.1904 -0.0015 8 6 4.1911 -2.4903 -0.0021 9 8 5.1924 -2.6329 0.6710 10 7 3.7302 -3.5128 -0.7494 11 6 2.4745 -3.3839 -1.5013 12 6 2.7393 -3.7392 -2.9677 13 6 3.3783 -5.1276 -3.0447 14 6 4.7159 -5.1173 -2.3012 15 1 5.3727 -4.3687 -2.7443 16 7 5.3417 -6.4381 -2.4022 17 6 6.7008 -6.5622 -2.2897 18 1 7.3113 -5.6865 -2.1260 19 6 7.2938 -7.8136 -2.3859 20 7 8.6006 -7.9323 -2.2831 21 14 6.2378 -9.3284 -2.6683 22 1 6.0874 -9.5620 -4.1271 23 1 6.8870 -10.5081 -2.0424 24 1 4.8993 -9.1191 -2.0600 25 6 4.4736 -4.7777 -0.8272 26 7 2.1450 -1.1501 -0.0061 27 1 -0.3634 0.0001 -1.0276 28 1 -0.3634 -0.8900 0.5138 29 1 -0.3633 0.8899 0.5140 30 1 3.9811 2.1507 -0.0001 31 1 2.1116 -2.3584 -1.4335 32 1 1.7283 -4.0636 -1.0897 33 1 3.4145 -3.0032 -3.4042 34 1 1.7979 -3.7410 -3.5173 35 1 3.5452 -5.3931 -4.0887 36 1 2.7134 -5.8592 -2.5858 37 1 4.7934 -7.2247 -2.5488 38 1 9.0150 -8.8067 -2.3507 39 1 3.8923 -5.5726 -0.3598 40 1 5.4297 -4.6717 -0.3147 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001000376258.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:59:06 Heat of formation + Delta-G solvation = 38.599950 kcal Electronic energy + Delta-G solvation = -25377.133169 eV Core-core repulsion = 21640.029554 eV Total energy + Delta-G solvation = -3737.103615 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.79078 -39.78231 -37.55930 -36.93893 -34.92654 -34.16929 -33.40600 -32.31861 -31.35228 -28.92356 -28.81045 -26.65093 -24.70178 -24.00393 -23.24060 -21.78099 -20.76907 -19.50887 -18.56787 -17.57259 -17.50609 -16.69446 -16.24883 -15.74049 -15.31975 -14.99321 -14.67628 -14.32783 -14.02606 -13.91887 -13.72367 -13.43290 -13.14987 -12.86922 -12.71329 -12.64253 -12.48636 -12.17470 -11.89013 -11.69502 -11.56581 -11.36886 -11.08033 -10.94456 -10.75099 -10.55385 -10.42468 -10.31340 -9.93412 -9.61374 -9.51798 -9.41798 -9.13616 -8.47934 -7.32935 -5.79031 -3.16873 0.05723 0.31032 1.63962 2.49073 2.74648 3.11078 3.35434 3.37684 3.43850 3.45198 3.58486 3.93013 4.22626 4.51039 4.56212 4.81680 4.88793 5.03990 5.10734 5.17066 5.22199 5.34365 5.37841 5.43971 5.62065 5.68611 5.76724 5.82927 5.87693 6.00776 6.04864 6.20539 6.22279 6.33000 6.56311 6.66066 6.83926 7.38572 7.44831 7.95649 8.07254 8.39438 9.16335 9.87907 10.06180 11.38855 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.018770 B = 0.003575 C = 0.003147 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1491.422276 B = 7830.220183 C = 8893.879956 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.313 3.687 3 N -0.496 5.496 4 C 0.170 3.830 5 C -0.115 4.115 6 Cl -0.003 7.003 7 C 0.160 3.840 8 C 0.561 3.439 9 O -0.503 6.503 10 N -0.581 5.581 11 C 0.098 3.902 12 C -0.132 4.132 13 C -0.130 4.130 14 C 0.173 3.827 15 H 0.060 0.940 16 N -0.741 5.741 17 C -0.250 4.250 18 H 0.092 0.908 19 C 0.008 3.992 20 N -0.930 5.930 21 Si 0.884 3.116 22 H -0.284 1.284 23 H -0.290 1.290 24 H -0.277 1.277 25 C 0.092 3.908 26 N -0.476 5.476 27 H 0.091 0.909 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.185 0.815 31 H 0.099 0.901 32 H 0.073 0.927 33 H 0.064 0.936 34 H 0.073 0.927 35 H 0.069 0.931 36 H 0.061 0.939 37 H 0.363 0.637 38 H 0.260 0.740 39 H 0.066 0.934 40 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.531 18.956 2.387 26.616 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.046 3.954 3 N -0.210 5.210 4 C 0.001 3.999 5 C -0.148 4.148 6 Cl 0.026 6.974 7 C 0.012 3.988 8 C 0.344 3.656 9 O -0.377 6.377 10 N -0.314 5.314 11 C -0.025 4.025 12 C -0.171 4.171 13 C -0.168 4.168 14 C 0.062 3.938 15 H 0.078 0.922 16 N -0.383 5.383 17 C -0.379 4.379 18 H 0.110 0.890 19 C -0.188 4.188 20 N -0.577 5.577 21 Si 0.714 3.286 22 H -0.210 1.210 23 H -0.217 1.217 24 H -0.203 1.203 25 C -0.032 4.032 26 N -0.194 5.194 27 H 0.110 0.890 28 H 0.109 0.891 29 H 0.109 0.891 30 H 0.202 0.798 31 H 0.117 0.883 32 H 0.091 0.909 33 H 0.083 0.917 34 H 0.092 0.908 35 H 0.088 0.912 36 H 0.080 0.920 37 H 0.196 0.804 38 H 0.070 0.930 39 H 0.084 0.916 40 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -18.527 18.823 2.760 26.555 hybrid contribution 0.440 -1.158 -0.163 1.249 sum -18.087 17.665 2.597 25.415 Atomic orbital electron populations 1.20640 0.84578 1.04765 1.04433 1.23483 0.98706 0.82964 0.90202 1.68314 1.08927 1.30281 1.13524 1.23404 0.89177 0.97379 0.89909 1.22869 0.89935 0.95983 1.05985 1.98461 1.04215 1.98667 1.96090 1.21823 0.89638 0.94428 0.92962 1.17668 0.84098 0.82238 0.81558 1.90886 1.24258 1.81334 1.41195 1.48097 1.23801 1.13915 1.45571 1.22152 0.85355 1.03787 0.91189 1.21922 1.01104 0.98114 0.95918 1.21875 0.97368 0.96077 1.01505 1.20460 0.92407 0.89213 0.91677 0.92156 1.42728 1.05167 1.02676 1.87730 1.19096 0.81228 0.95122 1.42491 0.89027 1.24682 0.95395 0.97131 1.01593 1.69705 1.08167 1.23365 1.56460 0.86558 0.79950 0.84045 0.78002 1.21044 1.21683 1.20281 1.22863 0.97300 0.81866 1.01160 1.68554 1.07289 1.30268 1.13333 0.89015 0.89081 0.89148 0.79783 0.88321 0.90913 0.91743 0.90830 0.91246 0.91994 0.80398 0.92968 0.91559 0.88396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.49 10.31 36.00 0.37 -0.11 16 2 C 0.31 3.00 7.64 -157.31 -1.20 1.79 16 3 N -0.50 -4.81 10.31 -10.70 -0.11 -4.92 16 4 C 0.17 1.57 11.14 -17.14 -0.19 1.38 16 5 C -0.12 -1.38 6.38 -38.78 -0.25 -1.63 16 6 Cl 0.00 -0.04 27.05 -51.86 -1.40 -1.45 16 7 C 0.16 2.17 6.04 -82.61 -0.50 1.67 16 8 C 0.56 9.26 7.21 -12.09 -0.09 9.18 16 9 O -0.50 -9.91 14.86 5.37 0.08 -9.83 16 10 N -0.58 -9.06 2.97 -173.69 -0.52 -9.58 16 11 C 0.10 1.18 6.05 -3.71 -0.02 1.16 16 12 C -0.13 -1.54 6.08 -26.61 -0.16 -1.70 16 13 C -0.13 -1.89 5.35 -26.69 -0.14 -2.03 16 14 C 0.17 3.27 2.92 -67.81 -0.20 3.07 16 15 H 0.06 1.24 8.08 -51.93 -0.42 0.82 16 16 N -0.74 -17.13 4.93 -53.31 -0.26 -17.39 16 17 C -0.25 -7.00 10.41 -15.06 -0.16 -7.16 16 18 H 0.09 2.80 8.06 -52.48 -0.42 2.37 16 19 C 0.01 0.24 5.50 -17.43 -0.10 0.14 16 20 N -0.93 -29.25 13.97 55.49 0.78 -28.47 16 21 Si 0.88 21.83 27.74 -169.99 -4.71 17.12 16 22 H -0.28 -6.94 7.11 56.52 0.40 -6.54 16 23 H -0.29 -7.31 7.11 56.52 0.40 -6.91 16 24 H -0.28 -6.37 6.52 56.52 0.37 -6.01 16 25 C 0.09 1.68 6.01 -3.71 -0.02 1.66 16 26 N -0.48 -5.51 7.31 -7.31 -0.05 -5.57 16 27 H 0.09 0.39 8.14 -51.93 -0.42 -0.03 16 28 H 0.09 0.46 8.14 -51.93 -0.42 0.04 16 29 H 0.09 0.42 8.14 -51.93 -0.42 -0.01 16 30 H 0.19 1.08 8.06 -52.48 -0.42 0.65 16 31 H 0.10 1.11 4.55 -51.93 -0.24 0.88 16 32 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 33 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 34 H 0.07 0.68 8.14 -51.93 -0.42 0.26 16 35 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 36 H 0.06 0.86 8.14 -51.93 -0.42 0.43 16 37 H 0.36 8.15 5.66 -40.82 -0.23 7.92 16 38 H 0.26 7.78 8.31 -40.82 -0.34 7.44 16 39 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 40 H 0.10 2.11 7.03 -51.93 -0.36 1.75 16 LS Contribution 343.94 15.07 5.18 5.18 Total: -1.00 -33.54 343.94 -8.75 -42.29 By element: Atomic # 1 Polarization: 10.25 SS G_CDS: -5.07 Total: 5.18 kcal Atomic # 6 Polarization: 10.08 SS G_CDS: -2.66 Total: 7.43 kcal Atomic # 7 Polarization: -65.76 SS G_CDS: -0.17 Total: -65.93 kcal Atomic # 8 Polarization: -9.91 SS G_CDS: 0.08 Total: -9.83 kcal Atomic # 14 Polarization: 21.83 SS G_CDS: -4.71 Total: 17.12 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.40 Total: -1.45 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -33.54 -8.75 -42.29 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001000376258.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.892 kcal (2) G-P(sol) polarization free energy of solvation -33.544 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.348 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.748 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.292 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.600 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds