Wall clock time and date at job start Tue Mar 31 2020 13:59:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.31929 * 119.01954 * 2 1 4 4 C 1.32126 * 121.05790 * 180.02562 * 3 2 1 5 5 C 1.38988 * 119.12569 * 359.72740 * 4 3 2 6 6 Cl 1.73604 * 120.89034 * 180.29200 * 5 4 3 7 7 C 1.39634 * 118.22553 * 0.53472 * 5 4 3 8 8 C 1.48369 * 120.56349 * 179.73799 * 7 5 4 9 9 O 1.21486 * 119.99995 * 352.39900 * 8 7 5 10 10 N 1.34777 * 119.99673 * 172.40183 * 8 7 5 11 11 C 1.46928 * 120.63529 * 350.33144 * 10 8 7 12 12 C 1.53187 * 108.77568 * 233.63269 * 11 10 8 13 13 C 1.53039 * 109.31434 * 305.36107 * 12 11 10 14 14 C 1.53044 * 109.53639 * 61.36634 * 13 12 11 15 15 H 1.08999 * 109.49384 * 58.58946 * 14 13 12 16 16 N 1.46496 * 109.52553 * 178.66753 * 14 13 12 17 17 C 1.36934 * 120.00217 * 204.92200 * 16 14 13 18 18 H 1.07997 * 120.00350 * 359.97438 * 17 16 14 19 19 C 1.38816 * 120.00240 * 180.02562 * 17 16 14 20 20 N 1.31623 * 120.00059 * 359.97438 * 19 17 16 21 21 Si 1.86804 * 120.00121 * 179.97438 * 19 17 16 22 22 H 1.48494 * 109.46901 * 359.97438 * 21 19 17 23 23 H 1.48498 * 109.47116 * 119.99888 * 21 19 17 24 24 H 1.48502 * 109.46973 * 239.99763 * 21 19 17 25 25 C 1.46933 * 120.62792 * 170.35324 * 10 8 7 26 26 N 1.31524 * 119.01711 * 180.02562 * 2 1 3 27 27 H 1.09007 * 109.46741 * 269.97685 * 1 2 3 28 28 H 1.09000 * 109.47845 * 29.97227 * 1 2 3 29 29 H 1.08997 * 109.47679 * 149.98196 * 1 2 3 30 30 H 1.08004 * 120.43932 * 179.97438 * 4 3 2 31 31 H 1.08995 * 109.58130 * 353.42309 * 11 10 8 32 32 H 1.09000 * 109.58429 * 113.84411 * 11 10 8 33 33 H 1.08992 * 109.50179 * 65.31326 * 12 11 10 34 34 H 1.09003 * 109.49355 * 185.38048 * 12 11 10 35 35 H 1.08999 * 109.46292 * 301.35297 * 13 12 11 36 36 H 1.08995 * 109.46580 * 181.38756 * 13 12 11 37 37 H 0.97006 * 120.00396 * 24.91669 * 16 14 13 38 38 H 0.96997 * 119.99881 * 180.02562 * 20 19 17 39 39 H 1.08998 * 109.58649 * 6.58648 * 25 10 8 40 40 H 1.08997 * 109.70490 * 246.22825 * 25 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1470 1.1537 0.0000 4 6 3.4674 1.2007 -0.0005 5 6 4.1867 0.0114 0.0047 6 17 5.9227 0.0197 0.0119 7 6 3.4757 -1.1904 -0.0011 8 6 4.1911 -2.4902 -0.0018 9 8 5.3981 -2.5192 -0.1364 10 7 3.5018 -3.6388 0.1469 11 6 2.0809 -3.6163 0.5201 12 6 1.8816 -4.4999 1.7555 13 6 2.4349 -5.8983 1.4722 14 6 3.9346 -5.8061 1.1813 15 1 4.4438 -5.3583 2.0346 16 7 4.4702 -7.1484 0.9415 17 6 5.7969 -7.4058 1.1626 18 1 6.4484 -6.6192 1.5134 19 6 6.3046 -8.6775 0.9348 20 7 5.5107 -9.6362 0.5068 21 14 8.1145 -9.0284 1.2358 22 1 8.7861 -7.7920 1.7104 23 1 8.2483 -10.0911 2.2644 24 1 8.7479 -9.4810 -0.0288 25 6 4.1572 -4.9374 -0.0607 26 7 2.1450 -1.1501 -0.0005 27 1 -0.3633 -0.0004 1.0277 28 1 -0.3635 0.8902 -0.5134 29 1 -0.3634 -0.8898 -0.5141 30 1 3.9811 2.1507 -0.0009 31 1 1.7796 -2.5942 0.7493 32 1 1.4804 -4.0003 -0.3046 33 1 2.4102 -4.0644 2.6034 34 1 0.8184 -4.5685 1.9859 35 1 1.9230 -6.3234 0.6089 36 1 2.2721 -6.5362 2.3410 37 1 3.8852 -7.8550 0.6261 38 1 5.8654 -10.5249 0.3481 39 1 5.2258 -4.7869 -0.2145 40 1 3.7283 -5.4303 -0.9331 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001000376262.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:59:08 Heat of formation + Delta-G solvation = 45.973794 kcal Electronic energy + Delta-G solvation = -25327.538700 eV Core-core repulsion = 21590.754839 eV Total energy + Delta-G solvation = -3736.783861 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.79584 -39.67735 -37.45274 -36.83945 -34.90197 -34.04276 -33.37825 -32.22066 -31.12729 -28.78808 -28.35356 -26.58036 -24.60005 -24.07399 -23.25391 -21.83440 -20.68747 -19.40799 -18.53841 -17.32408 -17.07052 -16.62806 -16.14337 -15.83664 -15.24072 -14.95353 -14.65706 -14.29775 -13.84892 -13.80040 -13.50507 -13.39736 -13.30697 -12.85187 -12.72035 -12.41427 -12.35296 -12.10251 -11.81155 -11.59795 -11.40106 -11.24364 -10.93250 -10.83287 -10.63422 -10.56422 -10.17516 -10.05244 -9.81186 -9.70481 -9.51967 -9.09978 -9.01263 -8.34039 -6.99756 -5.78513 -3.08165 0.01214 0.29066 1.68725 2.59153 2.83834 3.30393 3.40481 3.44765 3.51151 3.51542 3.53803 3.99070 4.23030 4.53486 4.59247 4.86160 5.11440 5.13711 5.21113 5.26160 5.33321 5.39442 5.49990 5.67411 5.71100 5.83093 5.91622 6.06820 6.14451 6.20046 6.21012 6.29547 6.39246 6.50396 6.74715 6.82693 7.00619 7.39578 7.56439 7.73099 8.15525 8.39737 9.51669 10.05541 10.40980 11.43796 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.017232 B = 0.003540 C = 0.003002 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1624.493401 B = 7907.892430 C = 9325.763075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.310 3.690 3 N -0.495 5.495 4 C 0.168 3.832 5 C -0.111 4.111 6 Cl 0.003 6.997 7 C 0.155 3.845 8 C 0.553 3.447 9 O -0.505 6.505 10 N -0.578 5.578 11 C 0.076 3.924 12 C -0.130 4.130 13 C -0.127 4.127 14 C 0.169 3.831 15 H 0.051 0.949 16 N -0.718 5.718 17 C -0.242 4.242 18 H 0.073 0.927 19 C -0.011 4.011 20 N -0.932 5.932 21 Si 0.906 3.094 22 H -0.279 1.279 23 H -0.291 1.291 24 H -0.291 1.291 25 C 0.091 3.909 26 N -0.472 5.472 27 H 0.092 0.908 28 H 0.090 0.910 29 H 0.092 0.908 30 H 0.185 0.815 31 H 0.133 0.867 32 H 0.065 0.935 33 H 0.060 0.940 34 H 0.071 0.929 35 H 0.061 0.939 36 H 0.066 0.934 37 H 0.386 0.614 38 H 0.255 0.745 39 H 0.092 0.908 40 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.109 22.875 -0.665 25.891 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.045 3.955 3 N -0.210 5.210 4 C 0.000 4.000 5 C -0.144 4.144 6 Cl 0.033 6.967 7 C 0.007 3.993 8 C 0.337 3.663 9 O -0.379 6.379 10 N -0.310 5.310 11 C -0.046 4.046 12 C -0.169 4.169 13 C -0.165 4.165 14 C 0.058 3.942 15 H 0.069 0.931 16 N -0.358 5.358 17 C -0.373 4.373 18 H 0.091 0.909 19 C -0.207 4.207 20 N -0.580 5.580 21 Si 0.737 3.263 22 H -0.204 1.204 23 H -0.218 1.218 24 H -0.218 1.218 25 C -0.033 4.033 26 N -0.190 5.190 27 H 0.110 0.890 28 H 0.109 0.891 29 H 0.110 0.890 30 H 0.202 0.798 31 H 0.150 0.850 32 H 0.083 0.917 33 H 0.079 0.921 34 H 0.089 0.911 35 H 0.080 0.920 36 H 0.085 0.915 37 H 0.219 0.781 38 H 0.065 0.935 39 H 0.110 0.890 40 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -12.077 22.763 -0.694 25.778 hybrid contribution 1.855 -0.573 -0.036 1.942 sum -10.222 22.190 -0.729 24.442 Atomic orbital electron populations 1.20664 0.84568 1.04858 1.04485 1.23613 0.98830 0.83169 0.89932 1.68308 1.08954 1.30315 1.13417 1.23429 0.89205 0.97415 0.89966 1.22887 0.90226 0.95879 1.05405 1.98457 1.03830 1.98590 1.95870 1.21927 0.89453 0.94664 0.93248 1.17696 0.86525 0.82530 0.79566 1.90893 1.12193 1.85714 1.49056 1.48150 1.11732 1.05729 1.65387 1.22838 0.80492 1.04446 0.96855 1.21919 1.00833 0.96273 0.97904 1.21844 0.96911 0.95881 1.01894 1.20476 0.92025 0.87321 0.94362 0.93094 1.42394 1.08365 1.05454 1.79611 1.19331 0.85579 0.95042 1.37328 0.90944 1.24747 0.97991 0.96029 1.01915 1.69673 1.34208 1.02106 1.52023 0.86123 0.84950 0.77838 0.77377 1.20404 1.21845 1.21791 1.22917 0.99314 0.80372 1.00742 1.68565 1.07458 1.28893 1.14036 0.88994 0.89138 0.88952 0.79849 0.85015 0.91680 0.92084 0.91057 0.92049 0.91544 0.78051 0.93519 0.88992 0.91609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.49 10.31 36.01 0.37 -0.11 16 2 C 0.31 2.92 7.64 -157.31 -1.20 1.72 16 3 N -0.50 -4.73 10.31 -10.70 -0.11 -4.84 16 4 C 0.17 1.53 11.14 -17.15 -0.19 1.33 16 5 C -0.11 -1.31 6.40 -38.78 -0.25 -1.56 16 6 Cl 0.00 0.04 26.28 -51.86 -1.36 -1.32 16 7 C 0.16 2.08 6.62 -82.61 -0.55 1.53 16 8 C 0.55 9.15 7.64 -12.09 -0.09 9.05 16 9 O -0.50 -9.72 13.64 5.38 0.07 -9.65 16 10 N -0.58 -9.30 2.97 -173.69 -0.52 -9.82 16 11 C 0.08 0.98 5.88 -3.71 -0.02 0.95 16 12 C -0.13 -1.67 6.08 -26.61 -0.16 -1.83 16 13 C -0.13 -2.04 5.36 -26.69 -0.14 -2.19 16 14 C 0.17 3.41 2.92 -67.81 -0.20 3.21 16 15 H 0.05 1.10 8.08 -51.93 -0.42 0.68 16 16 N -0.72 -17.92 5.12 -53.31 -0.27 -18.19 16 17 C -0.24 -6.77 9.93 -15.06 -0.15 -6.92 16 18 H 0.07 2.02 7.83 -52.49 -0.41 1.61 16 19 C -0.01 -0.31 5.50 -17.43 -0.10 -0.41 16 20 N -0.93 -28.08 13.06 55.49 0.72 -27.35 16 21 Si 0.91 22.76 29.55 -169.99 -5.02 17.74 16 22 H -0.28 -6.87 7.11 56.52 0.40 -6.47 16 23 H -0.29 -7.31 7.11 56.52 0.40 -6.91 16 24 H -0.29 -7.34 7.11 56.52 0.40 -6.94 16 25 C 0.09 1.73 6.03 -3.71 -0.02 1.71 16 26 N -0.47 -5.34 6.21 -7.31 -0.05 -5.39 16 27 H 0.09 0.40 8.14 -51.93 -0.42 -0.03 16 28 H 0.09 0.41 8.14 -51.93 -0.42 -0.02 16 29 H 0.09 0.45 8.14 -51.93 -0.42 0.02 16 30 H 0.18 1.03 8.06 -52.48 -0.42 0.61 16 31 H 0.13 1.54 4.10 -78.34 -0.32 1.22 16 32 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 33 H 0.06 0.82 8.14 -51.93 -0.42 0.39 16 34 H 0.07 0.74 8.14 -51.93 -0.42 0.31 16 35 H 0.06 0.97 8.14 -51.93 -0.42 0.54 16 36 H 0.07 1.10 8.14 -51.93 -0.42 0.68 16 37 H 0.39 10.10 7.80 -40.82 -0.32 9.78 16 38 H 0.25 7.43 8.31 -40.82 -0.34 7.09 16 39 H 0.09 2.01 7.01 -51.93 -0.36 1.65 16 40 H 0.07 1.26 8.14 -51.93 -0.42 0.83 16 LS Contribution 344.38 15.07 5.19 5.19 Total: -1.00 -32.46 344.38 -9.24 -41.70 By element: Atomic # 1 Polarization: 10.64 SS G_CDS: -5.20 Total: 5.44 kcal Atomic # 6 Polarization: 9.19 SS G_CDS: -2.70 Total: 6.49 kcal Atomic # 7 Polarization: -65.37 SS G_CDS: -0.22 Total: -65.59 kcal Atomic # 8 Polarization: -9.72 SS G_CDS: 0.07 Total: -9.65 kcal Atomic # 14 Polarization: 22.76 SS G_CDS: -5.02 Total: 17.74 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -1.36 Total: -1.32 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -32.46 -9.24 -41.70 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001000376262.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.675 kcal (2) G-P(sol) polarization free energy of solvation -32.459 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.216 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.701 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.974 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds