Wall clock time and date at job start Tue Mar 31 2020 14:00:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.31920 * 119.01865 * 2 1 4 4 C 1.32137 * 121.05670 * 179.97438 * 3 2 1 5 5 C 1.38986 * 119.12472 * 359.72583 * 4 3 2 6 6 Cl 1.73600 * 120.88929 * 180.29264 * 5 4 3 7 7 C 1.39635 * 118.22714 * 0.53940 * 5 4 3 8 8 C 1.48371 * 120.56560 * 179.73644 * 7 5 4 9 9 O 1.21484 * 119.99660 * 359.72171 * 8 7 5 10 10 N 1.34777 * 119.99912 * 179.71783 * 8 7 5 11 11 C 1.46498 * 119.99637 * 180.02562 * 10 8 7 12 12 H 1.08992 * 109.52612 * 325.08225 * 11 10 8 13 13 C 1.53039 * 109.49666 * 204.99948 * 11 10 8 14 14 C 1.53040 * 109.54124 * 178.68363 * 13 11 10 15 15 C 1.53198 * 109.31222 * 61.36517 * 14 13 11 16 16 N 1.46930 * 108.77449 * 305.36725 * 15 14 13 17 17 C 1.36933 * 120.63043 * 233.58316 * 16 15 14 18 18 H 1.08003 * 119.99602 * 152.01588 * 17 16 15 19 19 C 1.38808 * 120.00085 * 332.02242 * 17 16 15 20 20 N 1.31618 * 119.99941 * 342.86353 * 19 17 16 21 21 Si 1.86797 * 120.00297 * 162.87231 * 19 17 16 22 22 H 1.48504 * 109.46966 * 266.22377 * 21 19 17 23 23 H 1.48497 * 109.47662 * 146.22235 * 21 19 17 24 24 H 1.48508 * 109.47112 * 26.21892 * 21 19 17 25 25 C 1.46927 * 118.73585 * 53.85922 * 16 15 14 26 26 N 1.31524 * 119.01501 * 179.97438 * 2 1 3 27 27 H 1.08995 * 109.47205 * 270.01898 * 1 2 3 28 28 H 1.08996 * 109.47285 * 30.02650 * 1 2 3 29 29 H 1.09005 * 109.47206 * 150.01770 * 1 2 3 30 30 H 1.08004 * 120.44010 * 179.97438 * 4 3 2 31 31 H 0.96999 * 119.99925 * 359.97438 * 10 8 7 32 32 H 1.08998 * 109.45908 * 58.66176 * 13 11 10 33 33 H 1.08996 * 109.44905 * 298.69651 * 13 11 10 34 34 H 1.08998 * 109.49616 * 301.41601 * 14 13 11 35 35 H 1.08995 * 109.50042 * 181.31845 * 14 13 11 36 36 H 1.08995 * 109.58834 * 185.57941 * 15 14 13 37 37 H 1.08996 * 109.69956 * 65.22271 * 15 14 13 38 38 H 0.97001 * 120.00343 * 179.97438 * 20 19 17 39 39 H 1.09004 * 109.58859 * 65.93053 * 25 16 15 40 40 H 1.09008 * 109.58209 * 186.35024 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1469 1.1536 0.0000 4 6 3.4675 1.2006 0.0005 5 6 4.1867 0.0113 0.0069 6 17 5.9226 0.0196 0.0154 7 6 3.4757 -1.1905 0.0009 8 6 4.1911 -2.4904 0.0013 9 8 5.4057 -2.5152 0.0018 10 7 3.4934 -3.6435 0.0013 11 6 4.1998 -4.9269 0.0023 12 1 5.1138 -4.8401 -0.5851 13 6 3.3011 -6.0051 -0.6076 14 6 4.0501 -7.3393 -0.6371 15 6 4.4006 -7.7554 0.7950 16 7 5.1418 -6.6613 1.4373 17 6 6.3588 -6.8916 2.0212 18 1 7.0877 -6.0968 2.0817 19 6 6.6557 -8.1463 2.5351 20 7 5.6879 -9.0059 2.7730 21 14 8.4289 -8.6149 2.8895 22 1 8.9978 -9.3235 1.7150 23 1 8.4779 -9.5057 4.0765 24 1 9.2209 -7.3877 3.1585 25 6 4.5494 -5.3168 1.4465 26 7 2.1449 -1.1502 0.0005 27 1 -0.3633 0.0003 1.0276 28 1 -0.3633 0.8897 -0.5142 29 1 -0.3634 -0.8902 -0.5136 30 1 3.9812 2.1506 0.0001 31 1 2.5236 -3.6236 0.0013 32 1 3.0289 -5.7189 -1.6235 33 1 2.3986 -6.1086 -0.0053 34 1 4.9656 -7.2298 -1.2185 35 1 3.4181 -8.1014 -1.0930 36 1 5.0191 -8.6526 0.7739 37 1 3.4864 -7.9548 1.3539 38 1 5.8953 -9.8829 3.1318 39 1 3.6457 -5.3198 2.0561 40 1 5.2662 -4.6045 1.8555 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001008757608.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:00:28 Heat of formation + Delta-G solvation = 34.946630 kcal Electronic energy + Delta-G solvation = -25020.927647 eV Core-core repulsion = 21283.665612 eV Total energy + Delta-G solvation = -3737.262035 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.64679 -39.52786 -37.41356 -36.86523 -34.59216 -34.14614 -33.35328 -32.36106 -30.46412 -28.86166 -28.74200 -25.95354 -25.27945 -23.62793 -22.21556 -21.96488 -20.55820 -19.51772 -18.56040 -17.84234 -16.75865 -16.39661 -16.03388 -15.60650 -15.40527 -14.78480 -14.67461 -14.04662 -13.89080 -13.77534 -13.50431 -13.26587 -13.06802 -12.81885 -12.41188 -12.39484 -12.09657 -11.87499 -11.75167 -11.55869 -11.29938 -11.08502 -10.89471 -10.80370 -10.38809 -10.26422 -10.21051 -9.91304 -9.80654 -9.65002 -9.48420 -9.34720 -8.86041 -8.40358 -6.67139 -5.77685 -3.20471 0.03422 0.34747 1.71157 2.62085 2.89410 3.40069 3.40901 3.41282 3.47570 3.50163 3.54462 4.11698 4.29795 4.52740 4.60661 4.97699 5.15544 5.25608 5.31239 5.37997 5.39286 5.53368 5.60935 5.71163 5.80769 6.05798 6.11494 6.22437 6.24408 6.50972 6.59234 6.62277 6.68054 6.82047 6.95563 7.35675 7.42364 7.64864 7.65346 7.84210 8.21626 8.46688 9.22752 9.84709 10.40495 11.30889 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.017365 B = 0.003300 C = 0.002930 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1612.075780 B = 8482.666308 C = 9555.644315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.316 3.684 3 N -0.495 5.495 4 C 0.166 3.834 5 C -0.111 4.111 6 Cl 0.004 6.996 7 C 0.153 3.847 8 C 0.557 3.443 9 O -0.498 6.498 10 N -0.695 5.695 11 C 0.124 3.876 12 H 0.090 0.910 13 C -0.114 4.114 14 C -0.139 4.139 15 C 0.167 3.833 16 N -0.587 5.587 17 C -0.251 4.251 18 H 0.067 0.933 19 C 0.003 3.997 20 N -0.904 5.904 21 Si 0.903 3.097 22 H -0.287 1.287 23 H -0.291 1.291 24 H -0.278 1.278 25 C 0.142 3.858 26 N -0.482 5.482 27 H 0.091 0.909 28 H 0.089 0.911 29 H 0.091 0.909 30 H 0.185 0.815 31 H 0.405 0.595 32 H 0.051 0.949 33 H 0.061 0.939 34 H 0.058 0.942 35 H 0.055 0.945 36 H 0.089 0.911 37 H 0.019 0.981 38 H 0.253 0.747 39 H 0.019 0.981 40 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.570 18.459 -8.182 22.791 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.049 3.951 3 N -0.210 5.210 4 C -0.002 4.002 5 C -0.144 4.144 6 Cl 0.033 6.967 7 C 0.004 3.996 8 C 0.339 3.661 9 O -0.371 6.371 10 N -0.346 5.346 11 C 0.019 3.981 12 H 0.108 0.892 13 C -0.153 4.153 14 C -0.179 4.179 15 C 0.041 3.959 16 N -0.310 5.310 17 C -0.381 4.381 18 H 0.085 0.915 19 C -0.196 4.196 20 N -0.548 5.548 21 Si 0.733 3.267 22 H -0.214 1.214 23 H -0.218 1.218 24 H -0.203 1.203 25 C 0.015 3.985 26 N -0.199 5.199 27 H 0.110 0.890 28 H 0.108 0.892 29 H 0.110 0.890 30 H 0.201 0.799 31 H 0.240 0.760 32 H 0.070 0.930 33 H 0.079 0.921 34 H 0.076 0.924 35 H 0.074 0.926 36 H 0.107 0.893 37 H 0.038 0.962 38 H 0.063 0.937 39 H 0.037 0.963 40 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -10.468 18.187 -8.088 22.489 hybrid contribution 1.414 -0.181 0.264 1.449 sum -9.054 18.006 -7.824 21.620 Atomic orbital electron populations 1.20638 0.84607 1.04701 1.04468 1.23390 0.98647 0.82841 0.90212 1.68310 1.08999 1.30333 1.13363 1.23420 0.89197 0.97439 0.90186 1.22916 0.90258 0.95953 1.05251 1.98458 1.03774 1.98595 1.95839 1.21851 0.89475 0.94599 0.93697 1.17620 0.86869 0.82654 0.78989 1.90922 1.11920 1.86194 1.48037 1.46005 1.10778 1.05459 1.72336 1.21980 0.95554 0.79745 1.00786 0.89207 1.21678 0.98440 0.95785 0.99365 1.22177 0.99180 0.94788 1.01716 1.20848 0.95512 0.92574 0.86949 1.44016 1.20266 1.02762 1.63928 1.19248 0.90108 0.97136 1.31560 0.91486 1.25031 0.97520 0.98476 0.98541 1.70040 1.30002 1.07642 1.47125 0.86254 0.84803 0.78228 0.77402 1.21421 1.21799 1.20312 1.21270 0.96714 0.88994 0.91570 1.68345 1.07555 1.30923 1.13084 0.89035 0.89204 0.89050 0.79855 0.75987 0.92984 0.92075 0.92367 0.92619 0.89262 0.96241 0.93665 0.96311 0.92300 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.54 10.31 36.01 0.37 -0.16 16 2 C 0.32 3.19 7.64 -157.32 -1.20 1.99 16 3 N -0.50 -5.00 10.31 -10.70 -0.11 -5.11 16 4 C 0.17 1.58 11.14 -17.14 -0.19 1.39 16 5 C -0.11 -1.33 6.40 -38.78 -0.25 -1.58 16 6 Cl 0.00 0.05 26.25 -51.86 -1.36 -1.31 16 7 C 0.15 2.06 6.80 -82.61 -0.56 1.50 16 8 C 0.56 8.90 7.79 -12.09 -0.09 8.81 16 9 O -0.50 -9.38 13.81 5.38 0.07 -9.30 16 10 N -0.70 -10.51 5.07 -54.25 -0.28 -10.79 16 11 C 0.12 2.22 2.62 -67.59 -0.18 2.05 16 12 H 0.09 1.81 7.58 -51.93 -0.39 1.41 16 13 C -0.11 -1.84 5.35 -26.69 -0.14 -1.98 16 14 C -0.14 -2.56 6.08 -26.61 -0.16 -2.72 16 15 C 0.17 3.92 5.30 -3.71 -0.02 3.90 16 16 N -0.59 -14.89 2.99 -172.05 -0.51 -15.41 16 17 C -0.25 -7.05 9.58 -15.06 -0.14 -7.20 16 18 H 0.07 1.90 7.89 -52.48 -0.41 1.49 16 19 C 0.00 0.08 4.91 -17.43 -0.09 -0.01 16 20 N -0.90 -26.26 11.20 55.49 0.62 -25.64 16 21 Si 0.90 22.10 29.59 -169.99 -5.03 17.07 16 22 H -0.29 -6.98 7.11 56.52 0.40 -6.58 16 23 H -0.29 -7.16 7.11 56.52 0.40 -6.76 16 24 H -0.28 -6.73 7.11 56.52 0.40 -6.32 16 25 C 0.14 3.10 6.12 -3.49 -0.02 3.08 16 26 N -0.48 -5.71 9.59 -7.31 -0.07 -5.78 16 27 H 0.09 0.48 8.14 -51.93 -0.42 0.06 16 28 H 0.09 0.45 8.14 -51.93 -0.42 0.03 16 29 H 0.09 0.50 8.14 -51.93 -0.42 0.07 16 30 H 0.18 1.10 8.06 -52.48 -0.42 0.68 16 31 H 0.40 5.24 7.99 -40.82 -0.33 4.91 16 32 H 0.05 0.73 8.14 -51.93 -0.42 0.30 16 33 H 0.06 0.94 8.14 -51.93 -0.42 0.52 16 34 H 0.06 1.11 8.14 -51.93 -0.42 0.69 16 35 H 0.06 0.90 8.14 -51.93 -0.42 0.48 16 36 H 0.09 2.35 6.05 -51.93 -0.31 2.04 16 37 H 0.02 0.48 8.14 -51.93 -0.42 0.05 16 38 H 0.25 7.11 8.31 -40.82 -0.34 6.77 16 39 H 0.02 0.41 8.14 -51.93 -0.42 -0.01 16 40 H 0.06 1.37 7.93 -51.92 -0.41 0.96 16 LS Contribution 347.26 15.07 5.23 5.23 Total: -1.00 -31.88 347.26 -9.33 -41.22 By element: Atomic # 1 Polarization: 6.00 SS G_CDS: -5.22 Total: 0.78 kcal Atomic # 6 Polarization: 11.72 SS G_CDS: -2.68 Total: 9.04 kcal Atomic # 7 Polarization: -62.38 SS G_CDS: -0.35 Total: -62.73 kcal Atomic # 8 Polarization: -9.38 SS G_CDS: 0.07 Total: -9.30 kcal Atomic # 14 Polarization: 22.10 SS G_CDS: -5.03 Total: 17.07 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -1.36 Total: -1.31 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -31.88 -9.33 -41.22 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001008757608.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.163 kcal (2) G-P(sol) polarization free energy of solvation -31.885 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.278 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.331 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.216 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.947 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds