Wall clock time and date at job start Tue Mar 31 2020 13:51:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38071 * 126.27971 * 2 1 4 4 C 1.47380 * 126.42404 * 0.02562 * 3 2 1 5 5 O 1.21615 * 120.00412 * 270.17264 * 4 3 2 6 6 N 1.34781 * 120.00095 * 90.17509 * 4 3 2 7 7 C 1.47871 * 126.94117 * 0.02562 * 6 4 3 8 8 C 1.56018 * 105.10403 * 181.98144 * 7 6 4 9 9 H 1.08995 * 116.24717 * 158.83482 * 8 7 6 10 10 C 1.57087 * 99.60767 * 32.80682 * 8 7 6 11 11 C 1.49290 * 126.94568 * 179.71005 * 6 4 3 12 12 H 1.09001 * 116.15468 * 15.86038 * 11 6 4 13 13 C 1.58428 * 103.69947 * 246.54239 * 11 6 4 14 14 N 1.47869 * 104.83305 * 288.54744 * 13 11 6 15 15 C 1.36943 * 126.94483 * 182.30298 * 14 13 11 16 16 H 1.07994 * 119.99932 * 173.67834 * 15 14 13 17 17 C 1.38816 * 119.99727 * 353.68045 * 15 14 13 18 18 N 1.31617 * 120.00131 * 6.42738 * 17 15 14 19 19 Si 1.86807 * 119.99631 * 186.42924 * 17 15 14 20 20 H 1.48500 * 109.46944 * 94.98329 * 19 17 15 21 21 H 1.48499 * 109.46874 * 214.98380 * 19 17 15 22 22 H 1.48502 * 109.47109 * 334.98200 * 19 17 15 23 23 C 1.41395 * 107.15430 * 180.13502 * 3 2 1 24 24 Cl 1.73596 * 126.00596 * 179.89361 * 23 3 2 25 25 N 1.30532 * 107.98830 * 359.62489 * 23 3 2 26 26 N 1.34234 * 126.28108 * 179.72107 * 2 1 3 27 27 C 1.46495 * 125.73656 * 359.97438 * 26 2 1 28 28 H 1.09007 * 109.47276 * 270.30176 * 1 2 3 29 29 H 1.08999 * 109.47008 * 30.29966 * 1 2 3 30 30 H 1.08993 * 109.47125 * 150.29998 * 1 2 3 31 31 H 1.08995 * 110.31886 * 300.89111 * 7 6 4 32 32 H 1.09004 * 110.31468 * 63.07827 * 7 6 4 33 33 H 1.09003 * 112.36418 * 64.27225 * 10 8 7 34 34 H 1.08998 * 112.36827 * 191.71511 * 10 8 7 35 35 H 1.08998 * 110.19337 * 169.85677 * 13 11 6 36 36 H 1.09002 * 110.79083 * 47.53955 * 13 11 6 37 37 H 0.96998 * 119.99393 * 179.97438 * 18 17 15 38 38 H 1.09005 * 109.47390 * 269.97064 * 27 26 2 39 39 H 1.08991 * 109.47378 * 29.97517 * 27 26 2 40 40 H 1.09005 * 109.46709 * 149.97499 * 27 26 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3240 1.1130 0.0000 4 6 1.8858 2.5202 0.0005 5 8 1.7016 3.1002 -1.0524 6 7 1.6893 3.1644 1.1680 7 6 1.8664 2.6125 2.5284 8 6 1.4552 3.7680 3.4926 9 1 1.1726 3.4746 4.5036 10 6 0.3391 4.4505 2.6230 11 6 1.2550 4.5812 1.3490 12 1 0.8255 5.0677 0.4733 13 6 2.5181 5.2803 2.0016 14 7 2.5738 4.7501 3.3809 15 6 3.4703 5.0912 4.3582 16 1 3.3470 4.7098 5.3610 17 6 4.5376 5.9272 4.0599 18 7 4.6188 6.4932 2.8744 19 14 5.8585 6.2488 5.3410 20 1 6.9916 5.3126 5.1295 21 1 6.3415 7.6473 5.2137 22 1 5.2925 6.0423 6.6983 23 6 3.6599 0.6498 -0.0032 24 17 5.0842 1.6422 -0.0071 25 7 3.6340 -0.6553 0.0032 26 7 2.3013 -1.0821 0.0053 27 6 1.8491 -2.4755 0.0126 28 1 -0.3634 0.0054 1.0277 29 1 -0.3633 0.8873 -0.5185 30 1 -0.3633 -0.8926 -0.5091 31 1 1.2174 1.7490 2.6739 32 1 2.9080 2.3359 2.6918 33 1 -0.5161 3.7953 2.4572 34 1 0.0401 5.4209 3.0191 35 1 2.3835 6.3618 2.0170 36 1 3.4273 5.0206 1.4594 37 1 5.3644 7.0777 2.6662 38 1 1.7377 -2.8160 1.0421 39 1 0.8901 -2.5489 -0.5001 40 1 2.5831 -3.0983 -0.4987 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001032756274.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:51:34 Heat of formation + Delta-G solvation = 102.620024 kcal Electronic energy + Delta-G solvation = -26152.530375 eV Core-core repulsion = 22418.202879 eV Total energy + Delta-G solvation = -3734.327496 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.53820 -39.72774 -37.52581 -36.63849 -33.62044 -33.51482 -32.36380 -31.29382 -29.02850 -28.49816 -27.52656 -26.92182 -25.16041 -23.69546 -22.20503 -20.80538 -20.07834 -19.67245 -18.46345 -17.48519 -16.59877 -16.30719 -15.81716 -15.66770 -15.07327 -14.68221 -14.50162 -13.94419 -13.62978 -13.47619 -13.43608 -13.15192 -13.01558 -12.75386 -12.47239 -12.13399 -11.84489 -11.58962 -11.53210 -11.49808 -11.32322 -10.97395 -10.84632 -10.74549 -10.62036 -10.54478 -10.19965 -10.04677 -9.62443 -9.51937 -9.26527 -8.65104 -8.59551 -7.92835 -6.87607 -5.74340 -3.07516 1.46618 1.49450 2.26537 2.64376 2.97294 3.40087 3.44951 3.47590 3.57139 4.30064 4.37702 4.45289 4.72131 4.82392 4.91912 5.06474 5.19670 5.21556 5.24908 5.29346 5.43085 5.56511 5.60101 5.64319 5.66337 5.73624 5.91835 5.98325 6.25404 6.32000 6.43823 6.57116 6.61455 6.64362 6.76020 7.29801 7.44016 7.57426 7.77059 8.12221 8.15438 8.64733 9.13742 9.74876 10.44739 11.38112 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.015091 B = 0.004671 C = 0.004156 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1855.008292 B = 5993.000932 C = 6735.071447 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C 0.128 3.872 3 C -0.253 4.253 4 C 0.610 3.390 5 O -0.546 6.546 6 N -0.594 5.594 7 C 0.090 3.910 8 C 0.141 3.859 9 H 0.104 0.896 10 C -0.150 4.150 11 C 0.095 3.905 12 H 0.115 0.885 13 C 0.176 3.824 14 N -0.596 5.596 15 C -0.232 4.232 16 H 0.080 0.920 17 C -0.002 4.002 18 N -0.915 5.915 19 Si 0.908 3.092 20 H -0.289 1.289 21 H -0.291 1.291 22 H -0.281 1.281 23 C 0.159 3.841 24 Cl 0.028 6.972 25 N -0.285 5.285 26 N -0.354 5.354 27 C 0.099 3.901 28 H 0.089 0.911 29 H 0.092 0.908 30 H 0.077 0.923 31 H 0.048 0.952 32 H 0.070 0.930 33 H 0.065 0.935 34 H 0.083 0.917 35 H 0.051 0.949 36 H 0.053 0.947 37 H 0.254 0.746 38 H 0.081 0.919 39 H 0.091 0.909 40 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.532 -16.238 -4.092 19.782 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.002 4.002 3 C -0.268 4.268 4 C 0.396 3.604 5 O -0.424 6.424 6 N -0.326 5.326 7 C -0.035 4.035 8 C 0.032 3.968 9 H 0.121 0.879 10 C -0.190 4.190 11 C -0.007 4.007 12 H 0.133 0.867 13 C 0.051 3.949 14 N -0.320 5.320 15 C -0.360 4.360 16 H 0.098 0.902 17 C -0.199 4.199 18 N -0.562 5.562 19 Si 0.739 3.261 20 H -0.216 1.216 21 H -0.218 1.218 22 H -0.206 1.206 23 C -0.033 4.033 24 Cl 0.056 6.944 25 N -0.109 5.109 26 N -0.136 5.136 27 C -0.041 4.041 28 H 0.108 0.892 29 H 0.110 0.890 30 H 0.096 0.904 31 H 0.066 0.934 32 H 0.088 0.912 33 H 0.084 0.916 34 H 0.102 0.898 35 H 0.069 0.931 36 H 0.072 0.928 37 H 0.064 0.936 38 H 0.099 0.901 39 H 0.110 0.890 40 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -9.569 -16.914 -4.677 19.988 hybrid contribution 0.748 0.782 0.624 1.250 sum -8.821 -16.132 -4.053 18.827 Atomic orbital electron populations 1.20562 0.86056 1.04563 1.04098 1.21287 0.94702 0.85595 0.98616 1.19821 0.91142 0.94508 1.21364 1.16653 0.77134 0.83923 0.82699 1.90754 1.52934 1.67983 1.30773 1.49114 1.64861 1.13422 1.05190 1.23241 1.00991 0.97047 0.82268 1.23145 0.88823 0.89151 0.95636 0.87863 1.24176 0.96523 1.01429 0.96831 1.24918 0.97517 0.81443 0.96842 0.86705 1.22389 0.92340 0.95940 0.84238 1.45182 1.31804 1.44916 1.10092 1.19018 1.01971 1.25262 0.89713 0.90233 1.24811 0.98508 0.99727 0.96891 1.69916 1.31780 1.34009 1.20458 0.86163 0.82270 0.77237 0.80464 1.21635 1.21781 1.20603 1.22618 0.89259 0.90365 1.01073 1.98456 1.34935 1.64409 1.96602 1.77157 0.96458 1.10711 1.26614 1.47985 1.02916 1.06336 1.56364 1.21975 1.01201 0.76991 1.03967 0.89239 0.88955 0.90390 0.93400 0.91189 0.91597 0.89811 0.93088 0.92842 0.93593 0.90056 0.89006 0.88787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.82 9.92 36.01 0.36 -0.46 16 2 C 0.13 1.67 7.01 -81.60 -0.57 1.10 16 3 C -0.25 -4.34 5.15 -105.04 -0.54 -4.88 16 4 C 0.61 11.88 7.25 -12.54 -0.09 11.79 16 5 O -0.55 -12.21 17.45 5.26 0.09 -12.12 16 6 N -0.59 -11.22 2.95 -156.32 -0.46 -11.68 16 7 C 0.09 1.60 5.97 -1.67 -0.01 1.59 16 8 C 0.14 2.61 5.47 -62.55 -0.34 2.27 16 9 H 0.10 1.71 8.14 -51.93 -0.42 1.28 16 10 C -0.15 -2.46 6.86 -22.09 -0.15 -2.61 16 11 C 0.10 1.83 5.35 -60.96 -0.33 1.51 16 12 H 0.12 2.13 8.05 -51.93 -0.42 1.71 16 13 C 0.18 4.23 4.89 -0.29 0.00 4.23 16 14 N -0.60 -14.30 3.02 -154.77 -0.47 -14.77 16 15 C -0.23 -6.17 10.36 -15.06 -0.16 -6.33 16 16 H 0.08 2.03 7.84 -52.49 -0.41 1.61 16 17 C 0.00 -0.06 5.49 -17.43 -0.10 -0.16 16 18 N -0.92 -26.75 10.60 55.49 0.59 -26.16 16 19 Si 0.91 21.89 29.56 -169.99 -5.02 16.87 16 20 H -0.29 -7.07 7.11 56.52 0.40 -6.66 16 21 H -0.29 -7.13 7.11 56.52 0.40 -6.72 16 22 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 23 C 0.16 2.82 7.89 -16.90 -0.13 2.68 16 24 Cl 0.03 0.52 29.19 -51.86 -1.51 -0.99 16 25 N -0.28 -4.54 12.50 33.18 0.41 -4.13 16 26 N -0.35 -4.34 3.98 -63.34 -0.25 -4.59 16 27 C 0.10 0.64 11.24 59.84 0.67 1.31 16 28 H 0.09 0.65 8.14 -51.92 -0.42 0.22 16 29 H 0.09 0.92 7.97 -51.93 -0.41 0.50 16 30 H 0.08 0.43 7.05 -51.93 -0.37 0.07 16 31 H 0.05 0.71 8.14 -51.93 -0.42 0.29 16 32 H 0.07 1.44 8.14 -51.93 -0.42 1.02 16 33 H 0.07 0.91 8.14 -51.93 -0.42 0.49 16 34 H 0.08 1.39 8.14 -51.93 -0.42 0.97 16 35 H 0.05 1.34 7.64 -51.93 -0.40 0.94 16 36 H 0.05 1.50 7.53 -51.93 -0.39 1.11 16 37 H 0.25 7.28 8.31 -40.82 -0.34 6.94 16 38 H 0.08 0.40 8.14 -51.93 -0.42 -0.02 16 39 H 0.09 0.33 7.01 -51.93 -0.36 -0.03 16 40 H 0.09 0.54 8.14 -51.93 -0.42 0.12 16 LS Contribution 349.95 15.07 5.27 5.27 Total: -1.00 -34.52 349.95 -8.02 -42.53 By element: Atomic # 1 Polarization: 3.00 SS G_CDS: -5.28 Total: -2.28 kcal Atomic # 6 Polarization: 13.43 SS G_CDS: -1.39 Total: 12.04 kcal Atomic # 7 Polarization: -61.15 SS G_CDS: -0.18 Total: -61.33 kcal Atomic # 8 Polarization: -12.21 SS G_CDS: 0.09 Total: -12.12 kcal Atomic # 14 Polarization: 21.89 SS G_CDS: -5.02 Total: 16.87 kcal Atomic # 17 Polarization: 0.52 SS G_CDS: -1.51 Total: -0.99 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -34.52 -8.02 -42.53 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001032756274.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.153 kcal (2) G-P(sol) polarization free energy of solvation -34.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.638 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.018 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.533 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.620 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds