Wall clock time and date at job start Tue Mar 31 2020 14:00:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.31932 * 119.01814 * 2 1 4 4 C 1.32137 * 121.05399 * 180.02562 * 3 2 1 5 5 C 1.38985 * 119.12536 * 359.71411 * 4 3 2 6 6 Cl 1.73605 * 120.88662 * 180.29707 * 5 4 3 7 7 C 1.39634 * 118.22817 * 0.54905 * 5 4 3 8 8 C 1.48370 * 120.56081 * 179.73474 * 7 5 4 9 9 O 1.21477 * 120.00518 * 5.94909 * 8 7 5 10 10 N 1.34779 * 119.99256 * 185.95051 * 8 7 5 11 11 C 1.46498 * 120.00364 * 357.31568 * 10 8 7 12 12 C 1.46507 * 119.99317 * 177.31523 * 10 8 7 13 13 C 1.53003 * 109.46992 * 95.59088 * 12 10 8 14 14 H 1.08998 * 113.04202 * 65.46988 * 13 12 10 15 15 C 1.53945 * 113.76590 * 293.71964 * 13 12 10 16 16 C 1.53952 * 86.28788 * 222.09071 * 15 13 12 17 17 N 1.47579 * 86.23854 * 23.55377 * 16 15 13 18 18 C 1.36942 * 134.49271 * 155.42944 * 17 16 15 19 19 H 1.07997 * 119.99623 * 185.16489 * 18 17 16 20 20 C 1.38808 * 120.00083 * 5.16463 * 18 17 16 21 21 N 1.31618 * 119.99780 * 359.97438 * 20 18 17 22 22 Si 1.86801 * 120.00077 * 180.02562 * 20 18 17 23 23 H 1.48501 * 109.47211 * 359.97438 * 22 20 18 24 24 H 1.48494 * 109.47180 * 120.00018 * 22 20 18 25 25 H 1.48499 * 109.46949 * 239.99945 * 22 20 18 26 26 N 1.31521 * 119.01845 * 180.02562 * 2 1 3 27 27 H 1.08993 * 109.46762 * 269.98136 * 1 2 3 28 28 H 1.09002 * 109.46679 * 29.98432 * 1 2 3 29 29 H 1.08999 * 109.47127 * 149.97471 * 1 2 3 30 30 H 1.08003 * 120.43552 * 179.97438 * 4 3 2 31 31 H 1.09000 * 109.46808 * 275.98686 * 11 10 8 32 32 H 1.08995 * 109.47500 * 35.99176 * 11 10 8 33 33 H 1.09001 * 109.46981 * 155.98956 * 11 10 8 34 34 H 1.08991 * 109.47269 * 335.58684 * 12 10 8 35 35 H 1.09002 * 109.46620 * 215.58591 * 12 10 8 36 36 H 1.08995 * 113.74556 * 107.74747 * 15 13 12 37 37 H 1.09003 * 113.83960 * 336.44915 * 15 13 12 38 38 H 1.09002 * 113.76435 * 137.90452 * 16 15 13 39 39 H 1.08994 * 113.77280 * 269.19360 * 16 15 13 40 40 H 0.97005 * 119.99907 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1470 1.1537 0.0000 4 6 3.4675 1.2006 -0.0005 5 6 4.1867 0.0113 0.0050 6 17 5.9227 0.0197 0.0123 7 6 3.4758 -1.1904 -0.0009 8 6 4.1912 -2.4902 -0.0013 9 8 5.4003 -2.5181 0.1125 10 7 3.4995 -3.6400 -0.1281 11 6 2.0369 -3.6102 -0.2062 12 6 4.2104 -4.9196 -0.1877 13 6 4.2566 -5.5429 1.2089 14 1 3.2720 -5.8207 1.5849 15 6 5.1031 -4.7445 2.2169 16 6 5.6427 -6.1065 2.6903 17 7 5.2698 -6.6093 1.3538 18 6 5.6933 -7.6463 0.5660 19 1 5.3052 -7.7568 -0.4357 20 6 6.6215 -8.5552 1.0550 21 7 7.0949 -8.4201 2.2756 22 14 7.1998 -9.9693 -0.0199 23 1 6.5218 -9.8977 -1.3391 24 1 8.6693 -9.8760 -0.2123 25 1 6.8676 -11.2587 0.6375 26 7 2.1450 -1.1501 -0.0005 27 1 -0.3632 -0.0003 1.0276 28 1 -0.3633 0.8902 -0.5136 29 1 -0.3633 -0.8897 -0.5142 30 1 3.9812 2.1507 -0.0009 31 1 1.6200 -3.5744 0.8003 32 1 1.7206 -2.7277 -0.7621 33 1 1.6819 -4.5065 -0.7149 34 1 5.2265 -4.7544 -0.5457 35 1 3.6900 -5.5929 -0.8689 36 1 4.5125 -4.2212 2.9687 37 1 5.8587 -4.1104 1.7529 38 1 6.7164 -6.1124 2.8780 39 1 5.0664 -6.5490 3.5027 40 1 7.7433 -9.0555 2.6175 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001085854252.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:00:00 Heat of formation + Delta-G solvation = 97.034045 kcal Electronic energy + Delta-G solvation = -25350.261530 eV Core-core repulsion = 21615.691807 eV Total energy + Delta-G solvation = -3734.569722 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -41.72682 -39.59447 -37.64787 -36.90949 -35.41560 -34.21220 -33.35264 -32.08421 -28.76257 -28.68653 -27.75913 -26.86299 -25.33156 -23.66481 -23.20792 -22.22554 -20.03171 -18.92238 -18.50018 -17.41277 -16.70761 -16.43464 -16.20261 -15.87555 -15.29656 -15.11654 -14.68338 -14.08888 -13.94014 -13.61953 -13.59389 -13.27077 -12.87101 -12.78679 -12.66276 -12.26770 -12.07540 -12.06724 -11.59563 -11.46235 -11.29014 -11.16294 -10.99327 -10.80453 -10.65350 -10.38985 -10.16998 -9.81465 -9.64100 -9.50365 -9.42189 -9.16401 -8.73851 -8.30813 -6.79598 -5.70413 -3.02027 0.04465 0.33904 1.72351 2.62631 2.82399 3.36324 3.41635 3.42635 3.47250 3.50181 3.53835 3.99749 4.26407 4.51252 4.56742 4.90015 5.13863 5.18344 5.24407 5.36962 5.43876 5.49297 5.60621 5.69671 5.79011 5.91279 5.99796 6.10214 6.15054 6.25969 6.41021 6.59804 6.72173 6.80668 6.86114 7.33418 7.40139 7.48373 7.58755 7.67435 8.04866 8.16610 9.10833 9.77399 10.68774 11.47237 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.020573 B = 0.003293 C = 0.003050 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1360.701640 B = 8501.964810 C = 9177.511953 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.309 3.691 3 N -0.496 5.496 4 C 0.166 3.834 5 C -0.110 4.110 6 Cl 0.004 6.996 7 C 0.154 3.846 8 C 0.555 3.445 9 O -0.494 6.494 10 N -0.582 5.582 11 C 0.072 3.928 12 C 0.115 3.885 13 C 0.129 3.871 14 H 0.043 0.957 15 C -0.159 4.159 16 C 0.165 3.835 17 N -0.600 5.600 18 C -0.222 4.222 19 H 0.079 0.921 20 C -0.008 4.008 21 N -0.919 5.919 22 Si 0.909 3.091 23 H -0.280 1.280 24 H -0.290 1.290 25 H -0.291 1.291 26 N -0.473 5.473 27 H 0.091 0.909 28 H 0.089 0.911 29 H 0.090 0.910 30 H 0.184 0.816 31 H 0.056 0.944 32 H 0.101 0.899 33 H 0.062 0.938 34 H 0.095 0.905 35 H 0.072 0.928 36 H 0.040 0.960 37 H 0.087 0.913 38 H 0.066 0.934 39 H 0.025 0.975 40 H 0.252 0.748 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.326 20.883 -5.088 25.290 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.043 3.957 3 N -0.211 5.211 4 C -0.002 4.002 5 C -0.143 4.143 6 Cl 0.033 6.967 7 C 0.006 3.994 8 C 0.338 3.662 9 O -0.367 6.367 10 N -0.314 5.314 11 C -0.071 4.071 12 C -0.008 4.008 13 C 0.021 3.979 14 H 0.060 0.940 15 C -0.197 4.197 16 C 0.040 3.960 17 N -0.326 5.326 18 C -0.349 4.349 19 H 0.097 0.903 20 C -0.204 4.204 21 N -0.566 5.566 22 Si 0.740 3.260 23 H -0.205 1.205 24 H -0.218 1.218 25 H -0.218 1.218 26 N -0.191 5.191 27 H 0.110 0.890 28 H 0.107 0.893 29 H 0.109 0.891 30 H 0.201 0.799 31 H 0.075 0.925 32 H 0.119 0.881 33 H 0.081 0.919 34 H 0.113 0.887 35 H 0.090 0.910 36 H 0.059 0.941 37 H 0.105 0.895 38 H 0.084 0.916 39 H 0.043 0.957 40 H 0.062 0.938 Dipole moment (debyes) X Y Z Total from point charges -13.300 20.490 -5.106 24.956 hybrid contribution 1.182 -0.959 -0.374 1.567 sum -12.118 19.531 -5.480 23.629 Atomic orbital electron populations 1.20638 0.84665 1.04653 1.04451 1.23579 0.98787 0.83198 0.90139 1.68299 1.08978 1.30441 1.13375 1.23412 0.89202 0.97415 0.90186 1.22890 0.90262 0.95887 1.05277 1.98460 1.03762 1.98590 1.95843 1.21851 0.89515 0.94563 0.93493 1.17613 0.86653 0.82421 0.79500 1.90908 1.12229 1.85691 1.47866 1.47699 1.07898 1.06010 1.69774 1.22395 0.78646 1.03450 1.02576 1.21970 0.98283 0.81452 0.99105 1.22544 0.93439 0.89199 0.92731 0.94017 1.23830 0.99667 0.98102 0.98140 1.22100 0.99596 0.86863 0.87464 1.46016 1.38900 1.31431 1.16287 1.19030 1.19567 1.01587 0.94743 0.90340 1.24791 1.00194 0.98915 0.96521 1.69854 1.33494 1.37757 1.15499 0.86091 0.78336 0.82276 0.79321 1.20490 1.21753 1.21844 1.68938 1.07450 1.29169 1.13556 0.89044 0.89270 0.89090 0.79920 0.92549 0.88080 0.91891 0.88712 0.90994 0.94108 0.89459 0.91584 0.95734 0.93774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.48 10.31 36.01 0.37 -0.11 16 2 C 0.31 2.91 7.64 -157.31 -1.20 1.71 16 3 N -0.50 -4.80 10.31 -10.70 -0.11 -4.91 16 4 C 0.17 1.53 11.14 -17.14 -0.19 1.34 16 5 C -0.11 -1.30 6.40 -38.78 -0.25 -1.54 16 6 Cl 0.00 0.05 26.27 -51.86 -1.36 -1.31 16 7 C 0.15 2.03 6.66 -82.61 -0.55 1.48 16 8 C 0.55 8.83 7.30 -12.09 -0.09 8.75 16 9 O -0.49 -9.21 12.00 5.39 0.06 -9.14 16 10 N -0.58 -8.88 2.80 -182.50 -0.51 -9.40 16 11 C 0.07 0.84 9.43 59.85 0.56 1.41 16 12 C 0.11 2.09 5.42 -4.04 -0.02 2.07 16 13 C 0.13 2.71 4.58 -66.74 -0.31 2.40 16 14 H 0.04 0.87 8.14 -51.93 -0.42 0.44 16 15 C -0.16 -3.37 7.25 -25.79 -0.19 -3.55 16 16 C 0.16 4.15 7.38 -2.97 -0.02 4.13 16 17 N -0.60 -15.74 3.58 -169.74 -0.61 -16.35 16 18 C -0.22 -6.27 10.52 -15.06 -0.16 -6.43 16 19 H 0.08 2.12 7.83 -52.49 -0.41 1.71 16 20 C -0.01 -0.22 5.50 -17.43 -0.10 -0.32 16 21 N -0.92 -28.02 11.52 55.49 0.64 -27.38 16 22 Si 0.91 22.53 29.55 -169.99 -5.02 17.51 16 23 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 24 H -0.29 -7.26 7.11 56.52 0.40 -6.86 16 25 H -0.29 -7.25 7.11 56.52 0.40 -6.85 16 26 N -0.47 -5.28 6.09 -7.31 -0.04 -5.32 16 27 H 0.09 0.43 8.14 -51.93 -0.42 0.00 16 28 H 0.09 0.40 8.14 -51.93 -0.42 -0.02 16 29 H 0.09 0.41 8.14 -51.93 -0.42 -0.01 16 30 H 0.18 1.06 8.06 -52.48 -0.42 0.64 16 31 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 32 H 0.10 1.07 5.18 -52.18 -0.27 0.80 16 33 H 0.06 0.66 7.89 -51.93 -0.41 0.25 16 34 H 0.09 1.98 7.30 -51.93 -0.38 1.60 16 35 H 0.07 1.23 7.95 -51.93 -0.41 0.82 16 36 H 0.04 0.78 8.14 -51.93 -0.42 0.36 16 37 H 0.09 1.95 6.53 -51.93 -0.34 1.62 16 38 H 0.07 1.82 7.40 -51.93 -0.38 1.44 16 39 H 0.02 0.63 8.14 -51.93 -0.42 0.21 16 40 H 0.25 7.43 8.31 -40.82 -0.34 7.09 16 LS Contribution 346.43 15.07 5.22 5.22 Total: -1.00 -33.56 346.43 -8.99 -42.56 By element: Atomic # 1 Polarization: 2.32 SS G_CDS: -5.12 Total: -2.80 kcal Atomic # 6 Polarization: 13.46 SS G_CDS: -2.13 Total: 11.33 kcal Atomic # 7 Polarization: -62.72 SS G_CDS: -0.64 Total: -63.36 kcal Atomic # 8 Polarization: -9.21 SS G_CDS: 0.06 Total: -9.14 kcal Atomic # 14 Polarization: 22.53 SS G_CDS: -5.02 Total: 17.51 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -1.36 Total: -1.31 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -33.56 -8.99 -42.56 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001085854252.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 139.589 kcal (2) G-P(sol) polarization free energy of solvation -33.562 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.027 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.993 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.555 kcal (6) G-S(sol) free energy of system = (1) + (5) 97.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds