Wall clock time and date at job start Tue Mar 31 2020 14:00:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 N 1.31932 * 119.01835 * 2 1 4 4 C 1.32130 * 121.05388 * 180.02562 * 3 2 1 5 5 C 1.38983 * 119.12723 * 0.02562 * 4 3 2 6 6 Cl 1.73609 * 120.88545 * 179.97438 * 5 4 3 7 7 C 1.39633 * 118.22826 * 359.97438 * 5 4 3 8 8 C 1.48373 * 120.56242 * 180.02562 * 7 5 4 9 9 O 1.21488 * 119.99696 * 353.30712 * 8 7 5 10 10 N 1.34775 * 119.99826 * 173.30089 * 8 7 5 11 11 C 1.46498 * 120.00031 * 2.61495 * 10 8 7 12 12 C 1.46499 * 119.99937 * 182.61134 * 10 8 7 13 13 C 1.52998 * 109.47166 * 84.35713 * 12 10 8 14 14 H 1.08999 * 112.96319 * 290.46165 * 13 12 10 15 15 C 1.53949 * 113.77097 * 62.13554 * 13 12 10 16 16 C 1.53942 * 86.28982 * 137.90770 * 15 13 12 17 17 N 1.47574 * 113.77225 * 158.77706 * 13 12 10 18 18 C 1.36942 * 134.49100 * 41.06910 * 17 13 12 19 19 H 1.07995 * 119.99724 * 337.70860 * 18 17 13 20 20 C 1.38812 * 120.00182 * 157.70059 * 18 17 13 21 21 N 1.31618 * 120.00100 * 170.78826 * 20 18 17 22 22 Si 1.86799 * 119.99841 * 350.79688 * 20 18 17 23 23 H 1.48496 * 109.47757 * 86.03987 * 22 20 18 24 24 H 1.48507 * 109.46935 * 206.03912 * 22 20 18 25 25 H 1.48498 * 109.47355 * 326.03560 * 22 20 18 26 26 N 1.31519 * 119.01789 * 179.73542 * 2 1 3 27 27 H 1.09007 * 109.46788 * 89.99695 * 1 2 3 28 28 H 1.09000 * 109.47105 * 330.00147 * 1 2 3 29 29 H 1.08999 * 109.47236 * 209.99543 * 1 2 3 30 30 H 1.08005 * 120.43770 * 180.02562 * 4 3 2 31 31 H 1.09003 * 109.47104 * 83.86744 * 11 10 8 32 32 H 1.09004 * 109.47379 * 203.87055 * 11 10 8 33 33 H 1.08999 * 109.47211 * 323.87231 * 11 10 8 34 34 H 1.08996 * 109.47092 * 204.35614 * 12 10 8 35 35 H 1.09001 * 109.47420 * 324.35911 * 12 10 8 36 36 H 1.09004 * 113.74198 * 252.26298 * 15 13 12 37 37 H 1.08999 * 113.73949 * 23.45660 * 15 13 12 38 38 H 1.09006 * 113.76796 * 90.70071 * 16 15 13 39 39 H 1.08995 * 113.76739 * 221.97814 * 16 15 13 40 40 H 0.96998 * 119.99982 * 180.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1470 1.1537 0.0000 4 6 3.4675 1.2006 -0.0005 5 6 4.1867 0.0114 -0.0016 6 17 5.9228 0.0198 -0.0030 7 6 3.4757 -1.1904 -0.0015 8 6 4.1912 -2.4903 -0.0021 9 8 5.3995 -2.5185 -0.1252 10 7 3.5006 -3.6396 0.1341 11 6 2.0387 -3.6094 0.2251 12 6 4.2118 -4.9191 0.1910 13 6 4.6744 -5.1821 1.6255 14 1 5.4698 -4.5093 1.9459 15 6 3.5204 -5.3045 2.6371 16 6 4.3049 -6.4851 3.2376 17 7 4.9467 -6.6040 1.9115 18 6 5.5505 -7.6227 1.2237 19 1 5.6272 -7.5764 0.1475 20 6 6.0642 -8.7146 1.9099 21 7 6.4794 -9.7728 1.2465 22 14 6.1657 -8.6821 3.7748 23 1 4.8741 -9.1371 4.3491 24 1 7.2541 -9.5857 4.2271 25 1 6.4500 -7.2979 4.2312 26 7 2.1450 -1.1501 0.0053 27 1 -0.3633 0.0001 -1.0277 28 1 -0.3633 0.8900 0.5138 29 1 -0.3634 -0.8900 0.5138 30 1 3.9812 2.1507 -0.0001 31 1 1.6129 -3.5739 -0.7776 32 1 1.6879 -4.5054 0.7374 33 1 1.7276 -2.7264 0.7834 34 1 3.5449 -5.7200 -0.1282 35 1 5.0783 -4.8829 -0.4692 36 1 3.4320 -4.4497 3.3077 37 1 2.5702 -5.5908 2.1863 38 1 4.9927 -6.1966 4.0324 39 1 3.6800 -7.3373 3.5045 40 1 6.8380 -10.5359 1.7260 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001085854253.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:00:03 Heat of formation + Delta-G solvation = 101.670400 kcal Electronic energy + Delta-G solvation = -25325.045950 eV Core-core repulsion = 21590.677275 eV Total energy + Delta-G solvation = -3734.368675 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.77345 -39.68526 -38.12322 -36.97093 -35.46596 -34.27110 -33.39484 -32.21184 -29.03834 -28.79520 -28.33979 -26.91423 -25.44081 -23.87775 -23.05595 -22.58400 -20.18868 -19.28402 -18.49186 -17.47871 -16.81549 -16.52440 -16.24302 -15.91098 -15.39565 -15.33807 -15.06547 -14.31793 -14.04856 -13.78606 -13.39457 -13.21520 -12.90226 -12.85745 -12.84193 -12.69798 -12.29153 -12.11799 -11.85196 -11.65965 -11.65528 -11.39485 -11.36967 -10.95415 -10.70674 -10.29420 -10.17372 -10.05201 -9.89879 -9.53480 -9.41276 -9.25758 -8.85728 -8.40317 -7.04112 -5.89663 -3.27874 -0.00352 0.29755 1.67236 2.56386 2.75405 3.29897 3.35790 3.37798 3.46186 3.46802 3.49966 3.93726 4.21657 4.51772 4.55940 4.74154 4.86948 5.10890 5.18332 5.25113 5.30052 5.33832 5.39952 5.61226 5.68711 5.74700 5.80254 5.92337 6.05794 6.14144 6.21589 6.26939 6.36959 6.42405 6.51649 6.59811 7.03774 7.31602 7.36616 7.44640 8.06947 8.37936 8.71719 9.66395 10.34494 11.27368 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.019950 B = 0.003386 C = 0.003121 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1403.156841 B = 8267.415661 C = 8969.694981 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.310 3.690 3 N -0.495 5.495 4 C 0.167 3.833 5 C -0.111 4.111 6 Cl 0.003 6.997 7 C 0.154 3.846 8 C 0.554 3.446 9 O -0.501 6.501 10 N -0.580 5.580 11 C 0.071 3.929 12 C 0.118 3.882 13 C 0.130 3.870 14 H 0.053 0.947 15 C -0.144 4.144 16 C 0.096 3.904 17 N -0.615 5.615 18 C -0.229 4.229 19 H 0.097 0.903 20 C 0.019 3.981 21 N -0.921 5.921 22 Si 0.886 3.114 23 H -0.286 1.286 24 H -0.299 1.299 25 H -0.269 1.269 26 N -0.472 5.472 27 H 0.091 0.909 28 H 0.089 0.911 29 H 0.091 0.909 30 H 0.184 0.816 31 H 0.055 0.945 32 H 0.068 0.932 33 H 0.102 0.898 34 H 0.090 0.910 35 H 0.082 0.918 36 H 0.054 0.946 37 H 0.080 0.920 38 H 0.045 0.955 39 H 0.056 0.944 40 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.272 23.602 -1.936 27.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.044 3.956 3 N -0.210 5.210 4 C -0.002 4.002 5 C -0.143 4.143 6 Cl 0.032 6.968 7 C 0.005 3.995 8 C 0.337 3.663 9 O -0.374 6.374 10 N -0.312 5.312 11 C -0.071 4.071 12 C -0.005 4.005 13 C 0.023 3.977 14 H 0.071 0.929 15 C -0.182 4.182 16 C -0.028 4.028 17 N -0.343 5.343 18 C -0.356 4.356 19 H 0.114 0.886 20 C -0.179 4.179 21 N -0.565 5.565 22 Si 0.717 3.283 23 H -0.213 1.213 24 H -0.227 1.227 25 H -0.194 1.194 26 N -0.191 5.191 27 H 0.109 0.891 28 H 0.108 0.892 29 H 0.110 0.890 30 H 0.201 0.799 31 H 0.073 0.927 32 H 0.087 0.913 33 H 0.119 0.881 34 H 0.109 0.891 35 H 0.100 0.900 36 H 0.072 0.928 37 H 0.098 0.902 38 H 0.062 0.938 39 H 0.074 0.926 40 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -13.259 23.152 -2.110 26.763 hybrid contribution 1.318 -0.126 1.087 1.713 sum -11.941 23.025 -1.022 25.958 Atomic orbital electron populations 1.20647 0.84610 1.04760 1.04424 1.23589 0.98807 0.83166 0.90056 1.68302 1.08962 1.30451 1.13309 1.23415 0.89204 0.97408 0.90132 1.22890 0.90197 0.95914 1.05327 1.98459 1.03856 1.98592 1.95863 1.21818 0.89551 0.94481 0.93620 1.17682 0.86586 0.82549 0.79472 1.90912 1.12318 1.85783 1.48401 1.47720 1.08083 1.06007 1.69353 1.22451 0.78349 1.03977 1.02348 1.21826 0.97592 0.82195 0.98861 1.22527 0.94430 0.88175 0.92598 0.92914 1.23587 0.98169 0.97915 0.98503 1.22853 0.93664 0.96199 0.90130 1.46498 1.68323 1.04247 1.15218 1.18724 1.30475 0.94834 0.91532 0.88596 1.25048 0.98179 0.96885 0.97748 1.69724 1.46212 1.05637 1.34971 0.86786 0.77079 0.77450 0.87034 1.21253 1.22705 1.19386 1.68944 1.07392 1.29213 1.13508 0.89063 0.89229 0.89008 0.79898 0.92671 0.91330 0.88053 0.89137 0.89955 0.92770 0.90196 0.93787 0.92621 0.92742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.45 10.31 36.01 0.37 -0.08 16 2 C 0.31 2.81 7.64 -157.31 -1.20 1.61 16 3 N -0.50 -4.63 10.31 -10.70 -0.11 -4.74 16 4 C 0.17 1.48 11.14 -17.15 -0.19 1.28 16 5 C -0.11 -1.26 6.40 -38.78 -0.25 -1.50 16 6 Cl 0.00 0.04 26.27 -51.86 -1.36 -1.32 16 7 C 0.15 1.96 6.66 -82.61 -0.55 1.41 16 8 C 0.55 8.56 7.62 -12.09 -0.09 8.47 16 9 O -0.50 -9.15 13.84 5.38 0.07 -9.08 16 10 N -0.58 -8.51 2.73 -182.50 -0.50 -9.01 16 11 C 0.07 0.80 9.02 59.85 0.54 1.34 16 12 C 0.12 2.08 5.28 -4.04 -0.02 2.06 16 13 C 0.13 2.59 4.55 -66.87 -0.30 2.28 16 14 H 0.05 1.14 8.14 -51.93 -0.42 0.72 16 15 C -0.14 -2.45 7.27 -25.79 -0.19 -2.64 16 16 C 0.10 2.05 5.81 -2.85 -0.02 2.03 16 17 N -0.61 -14.90 3.29 -169.77 -0.56 -15.46 16 18 C -0.23 -6.53 10.96 -15.06 -0.17 -6.69 16 19 H 0.10 2.88 8.06 -52.49 -0.42 2.46 16 20 C 0.02 0.57 5.50 -17.43 -0.10 0.48 16 21 N -0.92 -28.86 13.97 55.49 0.78 -28.08 16 22 Si 0.89 22.95 25.26 -169.99 -4.29 18.66 16 23 H -0.29 -7.17 7.06 56.52 0.40 -6.77 16 24 H -0.30 -7.86 7.11 56.52 0.40 -7.46 16 25 H -0.27 -6.78 5.76 56.52 0.33 -6.45 16 26 N -0.47 -5.07 6.10 -7.31 -0.04 -5.11 16 27 H 0.09 0.38 8.14 -51.92 -0.42 -0.04 16 28 H 0.09 0.38 8.14 -51.93 -0.42 -0.04 16 29 H 0.09 0.40 8.14 -51.93 -0.42 -0.02 16 30 H 0.18 1.01 8.06 -52.48 -0.42 0.58 16 31 H 0.05 0.57 8.14 -51.93 -0.42 0.14 16 32 H 0.07 0.73 6.53 -51.93 -0.34 0.39 16 33 H 0.10 1.06 5.20 -52.06 -0.27 0.79 16 34 H 0.09 1.59 8.03 -51.93 -0.42 1.17 16 35 H 0.08 1.61 7.56 -51.93 -0.39 1.22 16 36 H 0.05 0.82 8.14 -51.93 -0.42 0.39 16 37 H 0.08 1.23 6.72 -51.93 -0.35 0.89 16 38 H 0.04 0.96 6.37 -51.93 -0.33 0.63 16 39 H 0.06 1.19 7.37 -51.93 -0.38 0.81 16 40 H 0.26 7.84 8.31 -40.82 -0.34 7.50 16 LS Contribution 340.94 15.07 5.14 5.14 Total: -1.00 -33.94 340.94 -8.12 -42.06 By element: Atomic # 1 Polarization: 1.98 SS G_CDS: -5.08 Total: -3.09 kcal Atomic # 6 Polarization: 12.20 SS G_CDS: -2.16 Total: 10.04 kcal Atomic # 7 Polarization: -61.96 SS G_CDS: -0.44 Total: -62.40 kcal Atomic # 8 Polarization: -9.15 SS G_CDS: 0.07 Total: -9.08 kcal Atomic # 14 Polarization: 22.95 SS G_CDS: -4.29 Total: 18.66 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -1.36 Total: -1.32 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -33.94 -8.12 -42.06 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001085854253.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 143.731 kcal (2) G-P(sol) polarization free energy of solvation -33.939 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 109.792 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.122 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.061 kcal (6) G-S(sol) free energy of system = (1) + (5) 101.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds