Wall clock time and date at job start Tue Mar 31 2020 14:11:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32991 * 1 3 3 C 1.50702 * 120.00115 * 2 1 4 4 C 1.47102 * 120.00040 * 180.02562 * 2 1 3 5 5 O 1.21611 * 120.00359 * 359.97438 * 4 2 1 6 6 N 1.34782 * 120.00113 * 180.02562 * 4 2 1 7 7 C 1.46491 * 120.00198 * 179.97438 * 6 4 2 8 8 C 1.53000 * 109.47226 * 179.97438 * 7 6 4 9 9 C 1.53007 * 109.47131 * 180.02562 * 8 7 6 10 10 N 1.46498 * 109.46715 * 179.97438 * 9 8 7 11 11 C 1.38540 * 119.99922 * 179.97438 * 10 9 8 12 12 C 1.40049 * 120.44672 * 0.02562 * 11 10 9 13 13 C 1.38799 * 118.59414 * 180.02562 * 12 11 10 14 14 Cl 1.73599 * 120.34072 * 179.97438 * 13 12 11 15 15 N 1.32212 * 119.32286 * 359.97438 * 13 12 11 16 16 C 1.33418 * 120.85893 * 0.02562 * 15 13 12 17 17 C 1.41573 * 119.23144 * 179.97438 * 16 15 13 18 18 H 1.08004 * 119.99748 * 173.64653 * 17 16 15 19 19 C 1.40049 * 120.00572 * 353.64374 * 17 16 15 20 20 N 1.30692 * 119.99799 * 6.31996 * 19 17 16 21 21 Si 1.86800 * 120.00509 * 186.31872 * 19 17 16 22 22 H 1.48499 * 109.47028 * 94.98296 * 21 19 17 23 23 H 1.48498 * 109.47164 * 214.98656 * 21 19 17 24 24 H 1.48497 * 109.47054 * 334.98541 * 21 19 17 25 25 N 1.32566 * 120.45445 * 179.72611 * 11 10 9 26 26 H 1.07996 * 120.00218 * 359.97438 * 1 2 3 27 27 H 1.08004 * 119.99892 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.47304 * 270.00388 * 3 2 1 29 29 H 1.09008 * 109.46697 * 30.00017 * 3 2 1 30 30 H 1.09003 * 109.47041 * 149.99532 * 3 2 1 31 31 H 0.97005 * 119.99256 * 359.97438 * 6 4 2 32 32 H 1.09005 * 109.47210 * 60.00021 * 7 6 4 33 33 H 1.09004 * 109.47624 * 300.00124 * 7 6 4 34 34 H 1.08995 * 109.47014 * 59.99898 * 8 7 6 35 35 H 1.09007 * 109.47143 * 299.99827 * 8 7 6 36 36 H 1.08995 * 109.46996 * 59.99654 * 9 8 7 37 37 H 1.08998 * 109.46681 * 299.99638 * 9 8 7 38 38 H 0.97003 * 120.00624 * 0.02562 * 10 9 8 39 39 H 1.07995 * 120.70313 * 359.97427 * 12 11 10 40 40 H 0.97001 * 120.00483 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3299 0.0000 0.0000 3 6 2.0835 1.3051 0.0000 4 6 2.0654 -1.2739 -0.0006 5 8 1.4575 -2.3272 -0.0006 6 7 3.4133 -1.2740 0.0000 7 6 4.1457 -2.5426 0.0000 8 6 5.6500 -2.2630 0.0000 9 6 6.4150 -3.5881 -0.0007 10 7 7.8553 -3.3203 -0.0013 11 6 8.7557 -4.3732 -0.0014 12 6 8.2992 -5.6973 -0.0015 13 6 9.2349 -6.7225 -0.0011 14 17 8.7194 -8.3802 -0.0005 15 7 10.5228 -6.4237 -0.0011 16 6 10.9306 -5.1533 -0.0011 17 6 12.3182 -4.8727 -0.0006 18 1 12.6632 -3.8544 -0.1040 19 6 13.2436 -5.9152 0.1341 20 7 12.8341 -7.1563 0.1352 21 14 15.0631 -5.5320 0.3122 22 1 15.4236 -5.5000 1.7525 23 1 15.8594 -6.5808 -0.3742 24 1 15.3529 -4.2105 -0.3000 25 7 10.0608 -4.1413 -0.0074 26 1 -0.5400 0.9352 0.0004 27 1 -0.5400 -0.9354 -0.0004 28 1 2.2651 1.6198 -1.0276 29 1 1.4943 2.0648 0.5139 30 1 3.0358 1.1747 0.5139 31 1 3.8982 -0.4338 0.0003 32 1 3.8828 -3.1140 -0.8903 33 1 3.8821 -3.1145 0.8897 34 1 5.9133 -1.6914 0.8899 35 1 5.9133 -1.6914 -0.8901 36 1 6.1516 -4.1592 -0.8908 37 1 6.1518 -4.1599 0.8891 38 1 8.1787 -2.4057 -0.0009 39 1 7.2416 -5.9159 -0.0010 40 1 13.4749 -7.8785 0.2281 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001167666415.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:11:45 Heat of formation + Delta-G solvation = 14.442256 kcal Electronic energy + Delta-G solvation = -23255.625815 eV Core-core repulsion = 19517.474644 eV Total energy + Delta-G solvation = -3738.151171 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.109 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -40.10686 -39.09009 -36.81240 -35.61046 -35.10661 -34.91297 -33.56227 -31.98497 -30.83487 -29.12405 -27.65300 -26.43730 -25.73054 -23.04718 -22.35556 -21.74833 -21.22653 -19.45471 -18.00029 -17.11858 -16.73145 -16.17863 -16.15299 -16.00241 -15.00781 -14.95766 -14.58239 -14.10696 -13.93661 -13.82828 -13.61710 -13.46113 -13.44483 -12.94162 -12.84990 -12.79617 -12.12676 -11.99142 -11.69121 -11.54343 -11.41578 -11.40306 -11.01422 -10.83022 -10.38937 -10.22652 -10.19244 -9.94503 -9.80907 -9.35439 -9.13345 -9.04429 -8.27519 -7.50603 -7.19626 -6.59292 -4.81301 1.02596 2.51054 2.82883 2.95116 2.96628 2.97973 3.04767 3.09503 3.12313 3.76612 3.89094 4.32560 4.45304 4.59892 4.75231 4.76565 4.87602 4.90138 5.11012 5.26150 5.36956 5.43679 5.44777 5.62986 5.80812 5.89788 5.90345 5.98219 5.98498 6.07354 6.13197 6.33809 6.41318 6.80654 6.91275 7.11237 7.17680 7.67938 7.90916 8.09477 8.17141 8.50563 8.57697 9.03141 10.07173 10.21987 Molecular weight = 324.11amu Principal moments of inertia in cm(-1) A = 0.020794 B = 0.002089 C = 0.001903 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1346.224204 B =13399.492374 C =14709.814527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C -0.184 4.184 3 C -0.119 4.119 4 C 0.549 3.451 5 O -0.542 6.542 6 N -0.725 5.725 7 C 0.121 3.879 8 C -0.142 4.142 9 C 0.141 3.859 10 N -0.731 5.731 11 C 0.455 3.545 12 C -0.405 4.405 13 C 0.269 3.731 14 Cl -0.081 7.081 15 N -0.528 5.528 16 C 0.434 3.566 17 C -0.395 4.395 18 H 0.096 0.904 19 C 0.065 3.935 20 N -0.701 5.701 21 Si 0.920 3.080 22 H -0.268 1.268 23 H -0.274 1.274 24 H -0.259 1.259 25 N -0.641 5.641 26 H 0.115 0.885 27 H 0.115 0.885 28 H 0.073 0.927 29 H 0.072 0.928 30 H 0.065 0.935 31 H 0.401 0.599 32 H 0.073 0.927 33 H 0.073 0.927 34 H 0.076 0.924 35 H 0.076 0.924 36 H 0.061 0.939 37 H 0.061 0.939 38 H 0.397 0.603 39 H 0.111 0.889 40 H 0.277 0.723 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.946 13.178 0.028 20.687 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.187 4.187 3 C -0.176 4.176 4 C 0.337 3.663 5 O -0.420 6.420 6 N -0.377 5.377 7 C -0.003 4.003 8 C -0.180 4.180 9 C 0.015 3.985 10 N -0.368 5.368 11 C 0.208 3.792 12 C -0.438 4.438 13 C 0.088 3.912 14 Cl -0.054 7.054 15 N -0.249 5.249 16 C 0.198 3.802 17 C -0.430 4.430 18 H 0.114 0.886 19 C -0.163 4.163 20 N -0.322 5.322 21 Si 0.743 3.257 22 H -0.193 1.193 23 H -0.199 1.199 24 H -0.183 1.183 25 N -0.371 5.371 26 H 0.133 0.867 27 H 0.134 0.866 28 H 0.092 0.908 29 H 0.091 0.909 30 H 0.084 0.916 31 H 0.237 0.763 32 H 0.092 0.908 33 H 0.092 0.908 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.079 0.921 37 H 0.079 0.921 38 H 0.232 0.768 39 H 0.129 0.871 40 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -15.425 12.108 0.025 19.609 hybrid contribution 0.096 0.396 0.111 0.422 sum -15.329 12.503 0.136 19.782 Atomic orbital electron populations 1.24622 0.94623 1.03370 0.91488 1.21663 0.95902 0.94302 1.06839 1.20852 1.00160 0.93856 1.02756 1.18475 0.82124 0.89452 0.76265 1.90810 1.68318 1.33029 1.49838 1.45949 1.06379 1.09972 1.75437 1.21271 0.90186 0.85621 1.03198 1.21948 0.93626 0.98890 1.03541 1.20993 0.80170 0.95551 1.01805 1.43970 1.02954 1.06544 1.83335 1.18111 0.88044 0.85638 0.87448 1.20930 0.98985 0.91409 1.32435 1.21456 0.91775 0.84412 0.93579 1.98297 1.89547 1.20864 1.96658 1.68603 1.12130 1.21698 1.22457 1.19470 0.93105 0.80417 0.87177 1.19350 0.87205 0.95343 1.41113 0.88594 1.26133 1.01855 0.94540 0.93773 1.70148 1.36073 0.99584 1.26421 0.86109 0.80649 0.79597 0.79326 1.19307 1.19946 1.18262 1.68220 0.99931 1.37133 1.31833 0.86725 0.86640 0.90782 0.90912 0.91596 0.76310 0.90832 0.90824 0.90539 0.90530 0.92054 0.92058 0.76825 0.87054 0.91144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.67 13.91 28.91 0.40 -0.27 16 2 C -0.18 -1.37 6.00 -102.85 -0.62 -1.98 16 3 C -0.12 -0.52 9.61 36.01 0.35 -0.18 16 4 C 0.55 5.77 7.75 -12.66 -0.10 5.67 16 5 O -0.54 -7.90 16.22 5.27 0.09 -7.81 16 6 N -0.73 -6.04 5.50 -61.49 -0.34 -6.38 16 7 C 0.12 1.12 5.67 -4.05 -0.02 1.09 16 8 C -0.14 -1.23 5.44 -26.73 -0.15 -1.38 16 9 C 0.14 1.77 4.92 -4.04 -0.02 1.75 16 10 N -0.73 -12.13 5.71 -60.25 -0.34 -12.47 16 11 C 0.45 10.17 7.71 -154.98 -1.19 8.97 16 12 C -0.40 -9.12 9.23 -38.70 -0.36 -9.47 16 13 C 0.27 6.69 7.33 -17.18 -0.13 6.57 16 14 Cl -0.08 -1.75 29.15 -51.86 -1.51 -3.26 16 15 N -0.53 -14.71 7.89 -9.84 -0.08 -14.79 16 16 C 0.43 12.13 7.36 -158.36 -1.17 10.96 16 17 C -0.39 -10.58 9.37 -37.63 -0.35 -10.93 16 18 H 0.10 2.45 7.86 -52.48 -0.41 2.03 16 19 C 0.07 1.62 5.49 -17.36 -0.10 1.53 16 20 N -0.70 -18.40 11.45 55.55 0.64 -17.76 16 21 Si 0.92 18.21 29.56 -169.99 -5.03 13.18 16 22 H -0.27 -5.25 7.11 56.52 0.40 -4.84 16 23 H -0.27 -5.30 7.11 56.52 0.40 -4.89 16 24 H -0.26 -5.02 7.11 56.52 0.40 -4.62 16 25 N -0.64 -16.49 10.39 -11.89 -0.12 -16.61 16 26 H 0.11 0.43 8.06 -52.49 -0.42 0.00 16 27 H 0.12 0.90 7.49 -52.48 -0.39 0.50 16 28 H 0.07 0.27 8.14 -51.93 -0.42 -0.15 16 29 H 0.07 0.24 8.07 -51.92 -0.42 -0.18 16 30 H 0.07 0.24 6.70 -51.93 -0.35 -0.11 16 31 H 0.40 2.27 6.57 -40.82 -0.27 2.00 16 32 H 0.07 0.74 8.14 -51.93 -0.42 0.32 16 33 H 0.07 0.74 8.14 -51.93 -0.42 0.32 16 34 H 0.08 0.61 8.14 -51.93 -0.42 0.19 16 35 H 0.08 0.61 8.14 -51.93 -0.42 0.19 16 36 H 0.06 0.79 7.97 -51.93 -0.41 0.38 16 37 H 0.06 0.79 7.97 -51.93 -0.41 0.38 16 38 H 0.40 6.02 8.60 -40.82 -0.35 5.67 16 39 H 0.11 2.21 6.85 -52.49 -0.36 1.85 16 40 H 0.28 6.55 8.29 -40.82 -0.34 6.21 16 LS Contribution 362.12 15.07 5.46 5.46 Total: -1.00 -33.12 362.12 -9.74 -42.86 By element: Atomic # 1 Polarization: 10.30 SS G_CDS: -5.05 Total: 5.25 kcal Atomic # 6 Polarization: 15.77 SS G_CDS: -3.45 Total: 12.33 kcal Atomic # 7 Polarization: -67.76 SS G_CDS: -0.25 Total: -68.01 kcal Atomic # 8 Polarization: -7.90 SS G_CDS: 0.09 Total: -7.81 kcal Atomic # 14 Polarization: 18.21 SS G_CDS: -5.03 Total: 13.18 kcal Atomic # 17 Polarization: -1.75 SS G_CDS: -1.51 Total: -3.26 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -33.12 -9.74 -42.86 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001167666415.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.301 kcal (2) G-P(sol) polarization free energy of solvation -33.121 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.180 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.737 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.859 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds