Wall clock time and date at job start Tue Mar 31 2020 14:05:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52997 * 109.47264 * 2 1 4 4 C 1.52998 * 109.47321 * 120.00634 * 2 1 3 5 5 N 1.46898 * 109.47174 * 177.54119 * 4 2 1 6 6 C 1.46892 * 111.00151 * 150.05536 * 5 4 2 7 7 C 1.50700 * 109.47395 * 295.94633 * 6 5 4 8 8 H 1.08010 * 119.99770 * 4.67754 * 7 6 5 9 9 C 1.37875 * 120.00475 * 184.66916 * 7 6 5 10 10 N 1.31517 * 119.99843 * 0.02562 * 9 7 6 11 11 Si 1.86805 * 119.99965 * 179.97438 * 9 7 6 12 12 H 1.48502 * 109.46873 * 90.00860 * 11 9 7 13 13 H 1.48500 * 109.47029 * 210.00579 * 11 9 7 14 14 H 1.48495 * 109.47331 * 330.00390 * 11 9 7 15 15 C 1.46903 * 110.99934 * 274.00786 * 5 4 2 16 16 C 1.50706 * 109.47002 * 80.09374 * 15 5 4 17 17 O 1.21286 * 120.00200 * 6.68564 * 16 15 5 18 18 N 1.34776 * 119.99920 * 186.68938 * 16 15 5 19 19 C 1.39976 * 120.00030 * 185.70355 * 18 16 15 20 20 C 1.38852 * 120.07342 * 23.01060 * 19 18 16 21 21 C 1.38119 * 119.93972 * 180.02562 * 20 19 18 22 22 C 1.38291 * 120.09213 * 359.96751 * 21 20 19 23 23 C 1.38250 * 120.15366 * 0.03276 * 22 21 20 24 24 C 1.38232 * 120.05824 * 359.97438 * 23 22 21 25 25 Cl 1.73596 * 120.05014 * 179.97438 * 24 23 22 26 26 H 1.09005 * 109.46754 * 299.99568 * 1 2 3 27 27 H 1.09000 * 109.47632 * 59.99327 * 1 2 3 28 28 H 1.08998 * 109.47685 * 179.97438 * 1 2 3 29 29 H 1.09005 * 109.46754 * 240.00432 * 2 1 3 30 30 H 1.09004 * 109.47458 * 300.60125 * 3 2 1 31 31 H 1.09000 * 109.46997 * 60.60252 * 3 2 1 32 32 H 1.09000 * 109.47113 * 180.59926 * 3 2 1 33 33 H 1.09001 * 109.47390 * 57.53541 * 4 2 1 34 34 H 1.09005 * 109.46991 * 297.53745 * 4 2 1 35 35 H 1.08998 * 109.47358 * 55.94593 * 6 5 4 36 36 H 1.09000 * 109.47596 * 175.95167 * 6 5 4 37 37 H 0.96998 * 119.99947 * 179.97438 * 10 9 7 38 38 H 1.09000 * 109.46864 * 320.09474 * 15 5 4 39 39 H 1.08999 * 109.47103 * 200.09454 * 15 5 4 40 40 H 0.96996 * 119.99799 * 5.70209 * 18 16 15 41 41 H 1.07997 * 120.02683 * 359.97362 * 20 19 18 42 42 H 1.07997 * 119.94917 * 179.97438 * 21 20 19 43 43 H 1.08003 * 119.92457 * 180.02562 * 22 21 20 44 44 H 1.08001 * 119.97820 * 179.72250 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7214 1.2491 5 7 3.5078 -0.7730 1.2197 6 6 4.0619 -0.7739 2.5802 7 6 3.7207 0.5258 3.2624 8 1 3.0861 1.2456 2.7667 9 6 4.2183 0.7960 4.5195 10 7 4.9913 -0.0803 5.1231 11 14 3.7958 2.4074 5.3648 12 1 2.5558 2.2368 6.1640 13 1 4.9117 2.8037 6.2610 14 1 3.5842 3.4625 4.3416 15 6 3.9785 -1.9382 0.4589 16 6 3.9113 -1.6356 -1.0159 17 8 3.6276 -0.5185 -1.3935 18 7 4.1666 -2.6064 -1.9153 19 6 4.2219 -2.2994 -3.2798 20 6 4.4930 -1.0009 -3.6904 21 6 4.5465 -0.7009 -5.0376 22 6 4.3310 -1.6919 -5.9777 23 6 4.0607 -2.9860 -5.5732 24 6 4.0056 -3.2932 -4.2266 25 17 3.6656 -4.9181 -3.7189 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 1.8933 -0.5138 -0.8901 30 1 1.6679 1.9595 -0.8846 31 1 1.6855 1.9531 0.8953 32 1 3.1300 1.4424 -0.0107 33 1 1.6411 -1.7355 1.2714 34 1 1.7132 -0.1827 2.1387 35 1 3.6367 -1.6033 3.1452 36 1 5.1451 -0.8850 2.5313 37 1 5.3417 0.1099 6.0073 38 1 3.3464 -2.7976 0.6826 39 1 5.0082 -2.1622 0.7374 40 1 4.3119 -3.5178 -1.6170 41 1 4.6612 -0.2262 -2.9570 42 1 4.7569 0.3090 -5.3571 43 1 4.3738 -1.4544 -7.0304 44 1 3.8884 -3.7568 -6.3098 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000049800749.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:05:17 Heat of formation + Delta-G solvation = -5.451885 kcal Electronic energy + Delta-G solvation = -25717.420584 eV Core-core repulsion = 22081.947081 eV Total energy + Delta-G solvation = -3635.473502 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -40.65971 -38.81033 -36.88930 -36.62694 -34.73006 -33.91746 -32.46844 -30.88442 -30.10505 -27.97119 -26.50561 -26.31691 -24.32728 -23.26009 -22.49199 -20.93730 -20.24427 -19.15657 -18.09782 -17.01658 -16.62904 -16.14875 -15.99113 -15.16404 -14.75097 -14.55528 -14.18758 -14.13314 -13.93408 -13.77416 -13.49669 -13.22765 -12.84363 -12.39526 -12.29194 -12.19620 -11.82395 -11.64726 -11.59198 -11.57035 -11.27785 -11.15112 -10.93606 -10.81275 -10.75516 -10.70239 -10.18514 -10.07409 -9.79259 -9.65887 -9.24207 -9.15844 -8.92792 -8.46900 -8.11676 -7.30667 -6.05115 -4.05169 0.96547 1.14525 1.90425 2.75269 2.96203 3.31742 3.38305 3.43681 3.58617 4.41503 4.58807 4.73922 4.83270 4.96763 5.09773 5.27594 5.30179 5.31882 5.54522 5.57593 5.68562 5.70150 5.73149 5.91081 6.00252 6.03269 6.05168 6.26375 6.27870 6.36685 6.43975 6.51219 6.61792 6.71288 6.80078 6.82697 7.11493 7.21650 7.28713 7.34530 7.39539 7.78084 8.00928 8.15491 8.28823 8.49140 9.02708 9.58868 11.06021 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.018009 B = 0.003187 C = 0.003065 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1554.440589 B = 8783.522900 C = 9134.312805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.098 4.098 3 C -0.117 4.117 4 C 0.065 3.935 5 N -0.513 5.513 6 C 0.195 3.805 7 C -0.504 4.504 8 H 0.068 0.932 9 C 0.056 3.944 10 N -0.900 5.900 11 Si 0.896 3.104 12 H -0.282 1.282 13 H -0.287 1.287 14 H -0.272 1.272 15 C 0.038 3.962 16 C 0.507 3.493 17 O -0.472 6.472 18 N -0.679 5.679 19 C 0.176 3.824 20 C -0.126 4.126 21 C -0.091 4.091 22 C -0.138 4.138 23 C -0.090 4.090 24 C -0.080 4.080 25 Cl -0.072 7.072 26 H 0.050 0.950 27 H 0.046 0.954 28 H 0.041 0.959 29 H 0.083 0.917 30 H 0.027 0.973 31 H 0.037 0.963 32 H 0.076 0.924 33 H 0.016 0.984 34 H 0.086 0.914 35 H -0.012 1.012 36 H 0.034 0.966 37 H 0.261 0.739 38 H 0.056 0.944 39 H 0.102 0.898 40 H 0.410 0.590 41 H 0.162 0.838 42 H 0.130 0.870 43 H 0.129 0.871 44 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.159 -7.703 -19.806 21.361 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.116 4.116 3 C -0.174 4.174 4 C -0.063 4.063 5 N -0.237 5.237 6 C 0.071 3.929 7 C -0.542 4.542 8 H 0.086 0.914 9 C -0.145 4.145 10 N -0.539 5.539 11 Si 0.724 3.276 12 H -0.208 1.208 13 H -0.213 1.213 14 H -0.197 1.197 15 C -0.094 4.094 16 C 0.295 3.705 17 O -0.343 6.343 18 N -0.324 5.324 19 C 0.079 3.921 20 C -0.146 4.146 21 C -0.110 4.110 22 C -0.158 4.158 23 C -0.109 4.109 24 C -0.109 4.109 25 Cl -0.044 7.044 26 H 0.069 0.931 27 H 0.065 0.935 28 H 0.061 0.939 29 H 0.101 0.899 30 H 0.046 0.954 31 H 0.057 0.943 32 H 0.095 0.905 33 H 0.034 0.966 34 H 0.104 0.896 35 H 0.006 0.994 36 H 0.052 0.948 37 H 0.071 0.929 38 H 0.074 0.926 39 H 0.120 0.880 40 H 0.246 0.754 41 H 0.179 0.821 42 H 0.148 0.852 43 H 0.147 0.853 44 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -2.113 -6.606 -19.936 21.108 hybrid contribution -0.421 -0.704 1.148 1.411 sum -2.534 -7.310 -18.787 20.318 Atomic orbital electron populations 1.21869 0.97316 1.00329 1.00938 1.21424 0.92722 0.98293 0.99197 1.21496 1.03145 0.94382 0.98424 1.22233 0.87481 0.97493 0.99085 1.61712 1.08059 1.35763 1.18190 1.19805 0.95260 0.96827 0.81050 1.21165 1.30233 1.02636 1.00203 0.91420 1.24960 0.95169 0.97009 0.97364 1.69949 1.33911 1.35201 1.14880 0.86522 0.77825 0.83873 0.79397 1.20789 1.21304 1.19663 1.22012 1.02980 0.94843 0.89595 1.21363 0.75692 0.84473 0.88928 1.90587 1.41773 1.21625 1.80359 1.43876 1.71083 1.13506 1.03953 1.17621 0.97855 0.93400 0.83227 1.21629 1.00129 0.95647 0.97233 1.21213 0.97686 0.99638 0.92461 1.21046 1.02471 0.92284 0.99952 1.20815 0.99658 0.97475 0.92984 1.20664 1.10503 0.85772 0.93970 1.98355 1.93899 1.20771 1.91328 0.93135 0.93536 0.93948 0.89903 0.95425 0.94346 0.90549 0.96557 0.89585 0.99375 0.94762 0.92947 0.92627 0.88023 0.75358 0.82123 0.85184 0.85347 0.84972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.25 9.19 37.16 0.34 -1.91 16 2 C -0.10 -1.73 2.39 -90.62 -0.22 -1.95 16 3 C -0.12 -2.20 8.51 37.16 0.32 -1.89 16 4 C 0.07 1.26 4.20 -3.83 -0.02 1.25 16 5 N -0.51 -10.48 3.38 -237.52 -0.80 -11.28 16 6 C 0.20 4.81 4.66 -4.98 -0.02 4.78 16 7 C -0.50 -13.67 8.21 -34.44 -0.28 -13.95 16 8 H 0.07 1.84 7.16 -52.48 -0.38 1.46 16 9 C 0.06 1.56 5.46 -17.82 -0.10 1.46 16 10 N -0.90 -26.07 13.29 55.43 0.74 -25.34 16 11 Si 0.90 21.48 29.54 -169.99 -5.02 16.46 16 12 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 13 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 14 H -0.27 -6.47 7.11 56.52 0.40 -6.06 16 15 C 0.04 0.61 5.53 -4.97 -0.03 0.59 16 16 C 0.51 7.71 6.85 -10.98 -0.08 7.63 16 17 O -0.47 -8.23 8.80 5.55 0.05 -8.18 16 18 N -0.68 -8.44 5.21 -9.83 -0.05 -8.49 16 19 C 0.18 2.21 6.46 -83.64 -0.54 1.67 16 20 C -0.13 -1.60 8.74 -39.40 -0.34 -1.95 16 21 C -0.09 -0.93 10.04 -39.61 -0.40 -1.33 16 22 C -0.14 -1.23 10.04 -39.56 -0.40 -1.63 16 23 C -0.09 -0.85 9.82 -39.58 -0.39 -1.24 16 24 C -0.08 -0.88 6.34 -39.32 -0.25 -1.13 16 25 Cl -0.07 -0.72 27.76 -51.86 -1.44 -2.16 16 26 H 0.05 0.77 8.14 -51.93 -0.42 0.35 16 27 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 28 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 29 H 0.08 1.52 4.54 -51.94 -0.24 1.28 16 30 H 0.03 0.47 8.14 -51.93 -0.42 0.05 16 31 H 0.04 0.74 8.14 -51.93 -0.42 0.31 16 32 H 0.08 1.61 6.97 -51.93 -0.36 1.25 16 33 H 0.02 0.30 7.47 -51.93 -0.39 -0.09 16 34 H 0.09 1.87 6.39 -51.93 -0.33 1.54 16 35 H -0.01 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.03 0.90 7.86 -51.93 -0.41 0.49 16 37 H 0.26 7.20 8.31 -40.82 -0.34 6.86 16 38 H 0.06 0.81 7.53 -51.93 -0.39 0.42 16 39 H 0.10 1.57 7.69 -51.93 -0.40 1.17 16 40 H 0.41 4.26 7.71 -40.82 -0.31 3.94 16 41 H 0.16 2.35 5.66 -52.49 -0.30 2.05 16 42 H 0.13 1.07 8.06 -52.49 -0.42 0.65 16 43 H 0.13 0.81 8.06 -52.48 -0.42 0.38 16 44 H 0.13 0.97 8.06 -52.49 -0.42 0.55 16 LS Contribution 366.04 15.07 5.52 5.52 Total: -1.00 -29.65 366.04 -9.85 -39.50 By element: Atomic # 1 Polarization: 10.01 SS G_CDS: -6.44 Total: 3.57 kcal Atomic # 6 Polarization: -7.19 SS G_CDS: -2.40 Total: -9.59 kcal Atomic # 7 Polarization: -45.00 SS G_CDS: -0.12 Total: -45.11 kcal Atomic # 8 Polarization: -8.23 SS G_CDS: 0.05 Total: -8.18 kcal Atomic # 14 Polarization: 21.48 SS G_CDS: -5.02 Total: 16.46 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.44 Total: -2.16 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -29.65 -9.85 -39.50 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000049800749.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.052 kcal (2) G-P(sol) polarization free energy of solvation -29.650 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.504 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds