Wall clock time and date at job start Tue Mar 31 2020 14:05:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53001 * 109.47106 * 2 1 4 4 C 1.53001 * 109.47111 * 120.00604 * 2 1 3 5 5 N 1.46903 * 109.46895 * 185.33812 * 4 2 1 6 6 C 1.46909 * 110.99325 * 277.52226 * 5 4 2 7 7 C 1.50698 * 109.47077 * 77.54732 * 6 5 4 8 8 H 1.08004 * 120.00049 * 359.89112 * 7 6 5 9 9 C 1.37880 * 120.00006 * 179.89475 * 7 6 5 10 10 N 1.31514 * 119.99709 * 359.97438 * 9 7 6 11 11 Si 1.86793 * 120.00017 * 179.97438 * 9 7 6 12 12 H 1.48505 * 109.47196 * 59.99837 * 11 9 7 13 13 H 1.48498 * 109.47322 * 179.97438 * 11 9 7 14 14 H 1.48500 * 109.47135 * 299.99915 * 11 9 7 15 15 C 1.46896 * 111.00046 * 153.57209 * 5 4 2 16 16 C 1.50691 * 109.47164 * 285.53851 * 15 5 4 17 17 O 1.21290 * 120.00171 * 2.26888 * 16 15 5 18 18 N 1.34780 * 120.00142 * 182.27008 * 16 15 5 19 19 C 1.39974 * 119.99729 * 184.05982 * 18 16 15 20 20 C 1.38860 * 120.06441 * 331.63388 * 19 18 16 21 21 C 1.38107 * 119.94452 * 180.23270 * 20 19 18 22 22 C 1.38377 * 120.05906 * 359.47250 * 21 20 19 23 23 Cl 1.73601 * 119.94651 * 180.29791 * 22 21 20 24 24 C 1.38388 * 120.11504 * 0.27358 * 22 21 20 25 25 C 1.38113 * 120.05469 * 359.97438 * 24 22 21 26 26 H 1.08998 * 109.47242 * 299.99839 * 1 2 3 27 27 H 1.09007 * 109.46980 * 59.99680 * 1 2 3 28 28 H 1.09003 * 109.47251 * 179.97438 * 1 2 3 29 29 H 1.09007 * 109.47066 * 240.00355 * 2 1 3 30 30 H 1.08998 * 109.47015 * 181.75595 * 3 2 1 31 31 H 1.08992 * 109.47590 * 301.75995 * 3 2 1 32 32 H 1.09004 * 109.46844 * 61.76457 * 3 2 1 33 33 H 1.08998 * 109.47088 * 65.33489 * 4 2 1 34 34 H 1.08997 * 109.46750 * 305.33005 * 4 2 1 35 35 H 1.09003 * 109.46592 * 197.54289 * 6 5 4 36 36 H 1.08990 * 109.47126 * 317.54159 * 6 5 4 37 37 H 0.96998 * 119.99406 * 179.97438 * 10 9 7 38 38 H 1.09000 * 109.47375 * 165.53283 * 15 5 4 39 39 H 1.09005 * 109.46931 * 45.53639 * 15 5 4 40 40 H 0.96997 * 119.99967 * 4.06576 * 18 16 15 41 41 H 1.08004 * 120.02466 * 359.97438 * 20 19 18 42 42 H 1.08001 * 119.96693 * 179.74998 * 21 20 19 43 43 H 1.07996 * 119.97659 * 179.97438 * 24 22 21 44 44 H 1.07997 * 120.02688 * 180.02562 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7214 1.2492 5 7 3.5033 -0.6108 1.3153 6 6 4.1466 -1.6279 0.4728 7 6 4.0733 -1.2036 -0.9714 8 1 3.5950 -0.2724 -1.2370 9 6 4.6168 -2.0041 -1.9536 10 7 5.1997 -3.1378 -1.6300 11 14 4.5253 -1.4785 -3.7437 12 1 5.2224 -0.1783 -3.9141 13 1 5.1785 -2.5050 -4.5951 14 1 3.1029 -1.3339 -4.1451 15 6 3.9759 -0.7012 2.7032 16 6 3.6701 0.5870 3.4229 17 8 3.0766 1.4759 2.8495 18 7 4.0560 0.7514 4.7038 19 6 3.6983 1.9125 5.3989 20 6 3.4947 3.1008 4.7100 21 6 3.1466 4.2461 5.3988 22 6 2.9900 4.2077 6.7732 23 17 2.5447 5.6472 7.6352 24 6 3.1871 3.0235 7.4616 25 6 3.5404 1.8765 6.7781 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8933 -0.5138 -0.8901 30 1 3.1295 1.4427 -0.0315 31 1 1.6512 1.9654 -0.8737 32 1 1.7027 1.9471 0.9054 33 1 1.7567 -1.7729 1.2026 34 1 1.6008 -0.2657 2.1366 35 1 5.1906 -1.7361 0.7671 36 1 3.6332 -2.5811 0.5980 37 1 5.5817 -3.7012 -2.3211 38 1 5.0520 -0.8746 2.7101 39 1 3.4717 -1.5267 3.2057 40 1 4.5817 0.0652 5.1438 41 1 3.6126 3.1304 3.6368 42 1 2.9921 5.1715 4.8638 43 1 3.0647 2.9961 8.5343 44 1 3.6937 0.9526 7.3157 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000049800759.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:05:20 Heat of formation + Delta-G solvation = -11.192321 kcal Electronic energy + Delta-G solvation = -25313.668304 eV Core-core repulsion = 21677.945878 eV Total energy + Delta-G solvation = -3635.722426 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -40.59157 -38.76389 -37.13146 -36.49721 -34.57735 -33.70543 -32.53005 -31.22192 -29.93780 -27.91095 -26.54298 -26.29630 -24.21812 -23.29574 -22.51461 -21.06386 -20.15805 -19.06299 -17.99546 -17.05569 -16.79805 -16.23001 -15.62039 -14.96330 -14.89930 -14.60765 -14.41661 -14.03098 -13.78671 -13.64447 -13.44248 -13.30279 -12.73986 -12.49218 -12.44720 -12.14676 -12.07345 -11.71378 -11.57938 -11.50556 -11.18092 -11.03769 -11.02671 -10.72686 -10.58597 -10.26416 -10.10473 -10.07412 -9.89900 -9.73934 -9.28681 -9.11492 -9.07003 -8.40541 -8.14381 -7.32708 -6.03552 -4.02569 0.94161 1.13566 1.99694 2.73135 2.96198 3.34211 3.37991 3.41902 3.54387 4.41456 4.57018 4.70203 4.81272 4.92603 5.07533 5.24035 5.31760 5.36885 5.53333 5.64944 5.71033 5.74445 5.80380 5.84893 6.02857 6.09548 6.11685 6.15769 6.27551 6.33201 6.39818 6.54671 6.72619 6.79000 6.80555 6.88758 7.10347 7.23879 7.34026 7.40325 7.43742 7.85543 8.03410 8.13325 8.28323 8.48859 9.05317 9.60661 11.07182 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.021177 B = 0.002679 C = 0.002568 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1321.843940 B =10450.996367 C =10900.610403 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.096 4.096 3 C -0.121 4.121 4 C 0.083 3.917 5 N -0.516 5.516 6 C 0.195 3.805 7 C -0.502 4.502 8 H 0.077 0.923 9 C 0.054 3.946 10 N -0.902 5.902 11 Si 0.894 3.106 12 H -0.276 1.276 13 H -0.289 1.289 14 H -0.276 1.276 15 C 0.039 3.961 16 C 0.511 3.489 17 O -0.485 6.485 18 N -0.682 5.682 19 C 0.165 3.835 20 C -0.120 4.120 21 C -0.089 4.089 22 C -0.061 4.061 23 Cl -0.081 7.081 24 C -0.091 4.091 25 C -0.146 4.146 26 H 0.042 0.958 27 H 0.047 0.953 28 H 0.045 0.955 29 H 0.097 0.903 30 H 0.072 0.928 31 H 0.024 0.976 32 H 0.045 0.955 33 H 0.024 0.976 34 H 0.048 0.952 35 H 0.027 0.973 36 H -0.004 1.004 37 H 0.261 0.739 38 H 0.101 0.899 39 H 0.056 0.944 40 H 0.410 0.590 41 H 0.162 0.838 42 H 0.134 0.866 43 H 0.133 0.867 44 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.640 9.153 17.898 20.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.114 4.114 3 C -0.178 4.178 4 C -0.045 4.045 5 N -0.240 5.240 6 C 0.070 3.930 7 C -0.541 4.541 8 H 0.095 0.905 9 C -0.147 4.147 10 N -0.542 5.542 11 Si 0.722 3.278 12 H -0.202 1.202 13 H -0.215 1.215 14 H -0.202 1.202 15 C -0.093 4.093 16 C 0.299 3.701 17 O -0.357 6.357 18 N -0.327 5.327 19 C 0.069 3.931 20 C -0.141 4.141 21 C -0.108 4.108 22 C -0.088 4.088 23 Cl -0.052 7.052 24 C -0.110 4.110 25 C -0.167 4.167 26 H 0.062 0.938 27 H 0.066 0.934 28 H 0.064 0.936 29 H 0.115 0.885 30 H 0.091 0.909 31 H 0.043 0.957 32 H 0.064 0.936 33 H 0.042 0.958 34 H 0.067 0.933 35 H 0.045 0.955 36 H 0.013 0.987 37 H 0.070 0.930 38 H 0.119 0.881 39 H 0.074 0.926 40 H 0.246 0.754 41 H 0.179 0.821 42 H 0.152 0.848 43 H 0.151 0.849 44 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -3.888 10.141 17.183 20.328 hybrid contribution 0.040 -0.948 -0.222 0.974 sum -3.848 9.193 16.961 19.672 Atomic orbital electron populations 1.21839 0.97299 1.00477 1.00544 1.21253 0.92703 0.97552 0.99907 1.21558 1.02811 0.94690 0.98754 1.21942 0.87717 0.97186 0.97664 1.61802 1.05853 1.52634 1.03734 1.19875 0.93657 0.87237 0.92226 1.21320 1.36147 1.06363 0.90245 0.90501 1.24982 0.95530 0.95021 0.99136 1.69941 1.38643 1.12176 1.33421 0.86618 0.78345 0.78231 0.84625 1.20150 1.21512 1.20195 1.21939 1.02510 0.92050 0.92841 1.21385 0.77913 0.90705 0.80086 1.90635 1.37965 1.42247 1.64804 1.43809 1.55201 1.19822 1.13896 1.17948 0.97319 0.86750 0.91051 1.21645 1.00040 0.89776 1.02599 1.21025 0.98768 0.99252 0.91741 1.20880 1.06899 0.88314 0.92712 1.98355 1.91489 1.38201 1.77146 1.20755 0.99473 0.90668 1.00109 1.20804 1.04400 0.98861 0.92623 0.93845 0.93356 0.93630 0.88476 0.90936 0.95675 0.93555 0.95773 0.93312 0.95537 0.98663 0.92978 0.88086 0.92615 0.75398 0.82097 0.84800 0.84903 0.84936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.34 9.19 37.16 0.34 -2.00 16 2 C -0.10 -1.84 2.42 -90.62 -0.22 -2.06 16 3 C -0.12 -2.32 7.95 37.16 0.30 -2.02 16 4 C 0.08 1.58 3.96 -3.82 -0.02 1.57 16 5 N -0.52 -10.26 3.03 -237.52 -0.72 -10.98 16 6 C 0.19 4.67 4.77 -4.97 -0.02 4.65 16 7 C -0.50 -13.28 7.69 -34.44 -0.26 -13.54 16 8 H 0.08 2.02 4.84 -52.48 -0.25 1.76 16 9 C 0.05 1.48 5.46 -17.82 -0.10 1.38 16 10 N -0.90 -25.82 13.29 55.43 0.74 -25.09 16 11 Si 0.89 21.28 29.54 -169.99 -5.02 16.26 16 12 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 13 H -0.29 -6.87 7.11 56.52 0.40 -6.46 16 14 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 15 C 0.04 0.59 5.43 -4.98 -0.03 0.57 16 16 C 0.51 7.39 7.26 -10.99 -0.08 7.31 16 17 O -0.49 -8.42 10.68 5.55 0.06 -8.36 16 18 N -0.68 -7.39 5.36 -9.86 -0.05 -7.44 16 19 C 0.17 1.88 6.41 -83.68 -0.54 1.35 16 20 C -0.12 -1.53 8.76 -39.40 -0.35 -1.87 16 21 C -0.09 -1.00 9.82 -39.58 -0.39 -1.39 16 22 C -0.06 -0.64 6.32 -39.48 -0.25 -0.89 16 23 Cl -0.08 -0.79 28.95 -51.86 -1.50 -2.29 16 24 C -0.09 -0.84 9.82 -39.57 -0.39 -1.23 16 25 C -0.15 -1.34 9.95 -39.39 -0.39 -1.74 16 26 H 0.04 0.66 8.14 -51.93 -0.42 0.24 16 27 H 0.05 0.74 8.14 -51.93 -0.42 0.31 16 28 H 0.04 0.71 8.14 -51.93 -0.42 0.28 16 29 H 0.10 2.16 5.45 -51.93 -0.28 1.88 16 30 H 0.07 1.56 6.88 -51.93 -0.36 1.20 16 31 H 0.02 0.44 8.14 -51.93 -0.42 0.02 16 32 H 0.05 0.87 7.09 -51.93 -0.37 0.50 16 33 H 0.02 0.48 7.57 -51.93 -0.39 0.08 16 34 H 0.05 0.88 6.67 -51.93 -0.35 0.54 16 35 H 0.03 0.67 7.58 -51.93 -0.39 0.28 16 36 H 0.00 -0.11 7.62 -51.93 -0.40 -0.51 16 37 H 0.26 7.15 8.31 -40.82 -0.34 6.81 16 38 H 0.10 1.45 7.61 -51.93 -0.40 1.05 16 39 H 0.06 0.77 8.02 -51.93 -0.42 0.35 16 40 H 0.41 3.07 8.80 -40.82 -0.36 2.71 16 41 H 0.16 2.36 5.73 -52.48 -0.30 2.06 16 42 H 0.13 1.34 8.06 -52.49 -0.42 0.92 16 43 H 0.13 0.96 8.06 -52.49 -0.42 0.53 16 44 H 0.13 0.87 8.06 -52.49 -0.42 0.45 16 LS Contribution 366.28 15.07 5.52 5.52 Total: -1.00 -29.76 366.28 -9.73 -39.48 By element: Atomic # 1 Polarization: 9.16 SS G_CDS: -6.36 Total: 2.80 kcal Atomic # 6 Polarization: -7.51 SS G_CDS: -2.39 Total: -9.91 kcal Atomic # 7 Polarization: -43.48 SS G_CDS: -0.03 Total: -43.51 kcal Atomic # 8 Polarization: -8.42 SS G_CDS: 0.06 Total: -8.36 kcal Atomic # 14 Polarization: 21.28 SS G_CDS: -5.02 Total: 16.26 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.50 Total: -2.29 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -29.76 -9.73 -39.48 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000049800759.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.293 kcal (2) G-P(sol) polarization free energy of solvation -29.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.726 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds