Wall clock time and date at job start Tue Mar 31 2020 14:35:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53001 * 109.46885 * 2 1 4 4 N 1.46500 * 109.47213 * 179.97438 * 3 2 1 5 5 C 1.36930 * 120.00302 * 269.75281 * 4 3 2 6 6 H 1.08006 * 119.99836 * 322.09969 * 5 4 3 7 7 C 1.38816 * 120.00352 * 142.09292 * 5 4 3 8 8 N 1.31618 * 120.00062 * 156.97159 * 7 5 4 9 9 Si 1.86804 * 119.99732 * 336.97918 * 7 5 4 10 10 H 1.48498 * 109.47179 * 95.69678 * 9 7 5 11 11 H 1.48501 * 109.46557 * 215.69897 * 9 7 5 12 12 H 1.48497 * 109.46941 * 335.69591 * 9 7 5 13 13 C 1.46499 * 119.99832 * 89.75234 * 4 3 2 14 14 C 1.50702 * 109.47163 * 90.00226 * 13 4 3 15 15 O 1.21276 * 119.99996 * 359.97438 * 14 13 4 16 16 N 1.34777 * 120.00003 * 180.02562 * 14 13 4 17 17 C 1.46494 * 120.00092 * 179.97438 * 16 14 13 18 18 H 1.09009 * 109.46955 * 35.00001 * 17 16 14 19 19 C 1.52994 * 109.47602 * 275.00021 * 17 16 14 20 20 C 1.50707 * 109.47441 * 154.99524 * 17 16 14 21 21 C 1.38240 * 120.00123 * 25.00128 * 20 17 16 22 22 C 1.38216 * 120.01140 * 179.74720 * 21 20 17 23 23 C 1.38262 * 120.02783 * 359.97438 * 22 21 20 24 24 C 1.38202 * 120.01455 * 359.97438 * 23 22 21 25 25 C 1.38326 * 120.00840 * 204.72645 * 20 17 16 26 26 Cl 1.73598 * 120.01474 * 0.25506 * 25 20 17 27 27 H 1.09000 * 109.47177 * 299.99486 * 1 2 3 28 28 H 1.08998 * 109.47226 * 60.00511 * 1 2 3 29 29 H 1.09008 * 109.46725 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47177 * 240.00514 * 2 1 3 31 31 H 1.09000 * 109.47309 * 120.00020 * 2 1 3 32 32 H 1.09008 * 109.47092 * 60.00109 * 3 2 1 33 33 H 1.09000 * 109.47163 * 300.00109 * 3 2 1 34 34 H 0.96998 * 119.99621 * 180.02562 * 8 7 5 35 35 H 1.09001 * 109.47471 * 330.00016 * 13 4 3 36 36 H 1.09003 * 109.47193 * 209.99903 * 13 4 3 37 37 H 0.97006 * 120.00007 * 359.97438 * 16 14 13 38 38 H 1.09005 * 109.47839 * 180.02562 * 19 17 16 39 39 H 1.09009 * 109.46949 * 299.99983 * 19 17 16 40 40 H 1.09005 * 109.47039 * 59.99636 * 19 17 16 41 41 H 1.07997 * 119.99333 * 359.72648 * 21 20 17 42 42 H 1.07999 * 119.98816 * 179.97438 * 22 21 20 43 43 H 1.07996 * 119.99612 * 179.97438 * 23 22 21 44 44 H 1.07996 * 120.00570 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 7 3.5049 1.4426 0.0006 5 6 4.1892 1.4479 1.1867 6 1 3.8196 2.0262 2.0207 7 6 5.3577 0.7100 1.3173 8 7 6.2443 1.0381 2.2331 9 14 5.6717 -0.7485 0.1933 10 1 6.5093 -0.3175 -0.9547 11 1 6.3786 -1.8131 0.9497 12 1 4.3769 -1.2745 -0.3086 13 6 4.2379 1.4370 -1.2678 14 6 4.4893 2.8559 -1.7091 15 8 4.0945 3.7807 -1.0311 16 7 5.1518 3.0970 -2.8577 17 6 5.3956 4.4763 -3.2870 18 1 5.5696 5.1036 -2.4126 19 6 4.1769 4.9953 -4.0525 20 6 6.6065 4.5169 -4.1832 21 6 6.9824 3.3892 -4.8888 22 6 8.0898 3.4277 -5.7149 23 6 8.8221 4.5942 -5.8365 24 6 8.4467 5.7226 -5.1324 25 6 7.3387 5.6843 -4.3043 26 17 6.8669 7.1010 -3.4189 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5137 -0.8900 29 1 -0.3633 -1.0278 -0.0005 30 1 1.8933 -0.5138 -0.8900 31 1 1.8934 -0.5138 0.8900 32 1 1.6766 1.9564 0.8901 33 1 1.6766 1.9564 -0.8900 34 1 7.0609 0.5226 2.3240 35 1 3.6492 0.9197 -2.0254 36 1 5.1904 0.9238 -1.1348 37 1 5.4672 2.3573 -3.4002 38 1 4.3584 6.0214 -4.3723 39 1 4.0029 4.3680 -4.9269 40 1 3.3010 4.9659 -3.4042 41 1 6.4108 2.4778 -4.7943 42 1 8.3834 2.5463 -6.2657 43 1 9.6875 4.6237 -6.4818 44 1 9.0185 6.6338 -5.2278 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000049981141.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:35:54 Heat of formation + Delta-G solvation = 4.387804 kcal Electronic energy + Delta-G solvation = -25508.677475 eV Core-core repulsion = 21873.630653 eV Total energy + Delta-G solvation = -3635.046822 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -40.09324 -38.73633 -36.56059 -36.22906 -35.04082 -32.86113 -31.69176 -31.12788 -30.95357 -29.33078 -27.20418 -25.72047 -24.01955 -23.07622 -22.22708 -21.18492 -20.12608 -19.66921 -17.91918 -16.85646 -16.44002 -15.95950 -15.55006 -15.31419 -14.78890 -14.53175 -14.30301 -14.08784 -13.97537 -13.74474 -13.51047 -13.19814 -12.81984 -12.63973 -12.48229 -12.40796 -12.20509 -11.85742 -11.64846 -11.63293 -11.56164 -11.20772 -11.19539 -10.80339 -10.74171 -10.64414 -10.54970 -10.16389 -9.85043 -9.58521 -9.19041 -9.09711 -8.91098 -8.61108 -8.50410 -6.85536 -5.99090 -3.39152 0.92696 1.01806 2.00673 3.20139 3.34631 3.39564 3.44003 3.52658 3.60095 4.39841 4.47894 4.54654 4.72281 4.95866 5.05232 5.11964 5.25024 5.30703 5.38593 5.43450 5.55818 5.62532 5.66597 5.74691 5.79263 5.90463 5.94365 5.98274 6.01492 6.15133 6.17020 6.18426 6.23737 6.28929 6.40095 6.54030 6.54284 6.56700 6.90298 6.91329 7.09372 7.91435 8.09907 8.43287 8.89227 9.06274 9.69419 10.08375 11.16683 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.013964 B = 0.003721 C = 0.003470 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2004.693330 B = 7522.305910 C = 8068.097025 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.146 4.146 3 C 0.156 3.844 4 N -0.578 5.578 5 C -0.257 4.257 6 H 0.080 0.920 7 C 0.034 3.966 8 N -0.894 5.894 9 Si 0.865 3.135 10 H -0.287 1.287 11 H -0.298 1.298 12 H -0.263 1.263 13 C 0.119 3.881 14 C 0.488 3.512 15 O -0.514 6.514 16 N -0.744 5.744 17 C 0.177 3.823 18 H 0.103 0.897 19 C -0.153 4.153 20 C -0.073 4.073 21 C -0.105 4.105 22 C -0.110 4.110 23 C -0.114 4.114 24 C -0.107 4.107 25 C -0.030 4.030 26 Cl -0.062 7.062 27 H 0.051 0.949 28 H 0.046 0.954 29 H 0.044 0.956 30 H 0.048 0.952 31 H 0.065 0.935 32 H 0.055 0.945 33 H 0.037 0.963 34 H 0.263 0.737 35 H 0.069 0.931 36 H 0.080 0.920 37 H 0.390 0.610 38 H 0.063 0.937 39 H 0.055 0.945 40 H 0.069 0.931 41 H 0.131 0.869 42 H 0.130 0.870 43 H 0.131 0.869 44 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.075 4.803 -19.344 19.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.186 4.186 3 C 0.030 3.970 4 N -0.298 5.298 5 C -0.386 4.386 6 H 0.097 0.903 7 C -0.167 4.167 8 N -0.534 5.534 9 Si 0.695 3.305 10 H -0.216 1.216 11 H -0.226 1.226 12 H -0.187 1.187 13 C -0.012 4.012 14 C 0.273 3.727 15 O -0.387 6.387 16 N -0.402 5.402 17 C 0.071 3.929 18 H 0.121 0.879 19 C -0.211 4.211 20 C -0.074 4.074 21 C -0.124 4.124 22 C -0.128 4.128 23 C -0.132 4.132 24 C -0.126 4.126 25 C -0.057 4.057 26 Cl -0.033 7.033 27 H 0.070 0.930 28 H 0.065 0.935 29 H 0.063 0.937 30 H 0.067 0.933 31 H 0.084 0.916 32 H 0.073 0.927 33 H 0.056 0.944 34 H 0.073 0.927 35 H 0.087 0.913 36 H 0.098 0.902 37 H 0.226 0.774 38 H 0.082 0.918 39 H 0.074 0.926 40 H 0.088 0.912 41 H 0.149 0.851 42 H 0.148 0.852 43 H 0.149 0.851 44 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 0.842 5.570 -18.568 19.404 hybrid contribution 0.724 -1.061 -0.830 1.530 sum 1.567 4.509 -19.398 19.977 Atomic orbital electron populations 1.21722 0.97079 1.00519 1.01121 1.22143 0.93938 1.00610 1.01876 1.20913 0.83195 0.93299 0.99552 1.43740 1.00717 1.84454 1.00844 1.18783 1.06134 1.23325 0.90317 0.90276 1.25485 0.96710 0.97899 0.96579 1.69902 1.08225 1.39109 1.36211 0.87088 0.78161 0.85102 0.80153 1.21552 1.22577 1.18707 1.21354 0.98539 0.91091 0.90231 1.22944 0.76398 0.94646 0.78730 1.90617 1.49275 1.46003 1.52773 1.46621 1.61169 1.06686 1.25700 1.19744 0.90806 0.85971 0.96356 0.87911 1.22103 0.97959 1.00873 1.00165 1.19953 0.96852 0.92551 0.98062 1.20923 0.97511 0.97585 0.96350 1.21232 0.94975 0.98319 0.98296 1.21109 1.00033 0.92471 0.99605 1.21048 0.95586 0.99675 0.96280 1.20761 0.97560 0.88829 0.98533 1.98387 1.91685 1.38708 1.74490 0.92977 0.93498 0.93697 0.93321 0.91583 0.92707 0.94440 0.92740 0.91311 0.90237 0.77419 0.91842 0.92587 0.91240 0.85128 0.85238 0.85124 0.84862 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.10 9.91 37.16 0.37 -1.73 16 2 C -0.15 -2.63 6.26 -26.73 -0.17 -2.80 16 3 C 0.16 3.20 5.67 -4.04 -0.02 3.17 16 4 N -0.58 -13.91 1.56 -174.60 -0.27 -14.18 16 5 C -0.26 -7.31 9.90 -15.06 -0.15 -7.46 16 6 H 0.08 2.49 8.06 -52.48 -0.42 2.07 16 7 C 0.03 0.97 5.29 -17.43 -0.09 0.88 16 8 N -0.89 -27.55 13.97 55.49 0.78 -26.77 16 9 Si 0.87 21.17 25.10 -169.99 -4.27 16.91 16 10 H -0.29 -6.66 6.68 56.52 0.38 -6.28 16 11 H -0.30 -7.48 7.11 56.52 0.40 -7.08 16 12 H -0.26 -6.12 7.11 56.52 0.40 -5.72 16 13 C 0.12 2.51 5.00 -5.19 -0.03 2.49 16 14 C 0.49 10.17 7.86 -10.98 -0.09 10.08 16 15 O -0.51 -12.77 16.09 5.56 0.09 -12.68 16 16 N -0.74 -12.03 5.00 -54.93 -0.27 -12.30 16 17 C 0.18 2.65 2.29 -69.09 -0.16 2.49 16 18 H 0.10 1.85 6.57 -51.92 -0.34 1.51 16 19 C -0.15 -2.01 9.47 37.15 0.35 -1.66 16 20 C -0.07 -0.93 5.06 -104.59 -0.53 -1.46 16 21 C -0.11 -1.14 9.24 -39.59 -0.37 -1.50 16 22 C -0.11 -0.99 10.05 -39.58 -0.40 -1.39 16 23 C -0.11 -0.99 10.05 -39.59 -0.40 -1.39 16 24 C -0.11 -1.07 9.83 -39.54 -0.39 -1.46 16 25 C -0.03 -0.36 6.31 -39.50 -0.25 -0.61 16 26 Cl -0.06 -0.78 27.15 -51.86 -1.41 -2.19 16 27 H 0.05 0.73 8.14 -51.93 -0.42 0.30 16 28 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 29 H 0.04 0.58 8.14 -51.92 -0.42 0.16 16 30 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 31 H 0.07 1.32 8.14 -51.93 -0.42 0.90 16 32 H 0.05 1.16 8.04 -51.92 -0.42 0.75 16 33 H 0.04 0.71 8.07 -51.93 -0.42 0.29 16 34 H 0.26 7.64 8.31 -40.82 -0.34 7.30 16 35 H 0.07 1.21 8.07 -51.93 -0.42 0.79 16 36 H 0.08 1.80 3.37 -51.93 -0.18 1.62 16 37 H 0.39 5.14 6.21 -40.82 -0.25 4.89 16 38 H 0.06 0.76 7.88 -51.93 -0.41 0.36 16 39 H 0.06 0.64 8.14 -51.92 -0.42 0.22 16 40 H 0.07 1.03 8.14 -51.93 -0.42 0.61 16 41 H 0.13 1.21 6.07 -52.49 -0.32 0.89 16 42 H 0.13 0.85 8.06 -52.49 -0.42 0.43 16 43 H 0.13 0.78 8.06 -52.49 -0.42 0.36 16 44 H 0.13 1.07 8.06 -52.49 -0.42 0.65 16 LS Contribution 373.76 15.07 5.63 5.63 Total: -1.00 -33.69 373.76 -8.60 -42.29 By element: Atomic # 1 Polarization: 12.19 SS G_CDS: -6.56 Total: 5.63 kcal Atomic # 6 Polarization: -0.03 SS G_CDS: -2.31 Total: -2.34 kcal Atomic # 7 Polarization: -53.48 SS G_CDS: 0.23 Total: -53.25 kcal Atomic # 8 Polarization: -12.77 SS G_CDS: 0.09 Total: -12.68 kcal Atomic # 14 Polarization: 21.17 SS G_CDS: -4.27 Total: 16.91 kcal Atomic # 17 Polarization: -0.78 SS G_CDS: -1.41 Total: -2.19 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -33.69 -8.60 -42.29 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000049981141.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.679 kcal (2) G-P(sol) polarization free energy of solvation -33.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.291 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.388 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds