Wall clock time and date at job start Tue Mar 31 2020 14:18:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53002 * 109.47300 * 2 1 4 4 H 1.09002 * 109.46831 * 304.99385 * 3 2 1 5 5 N 1.46497 * 109.46916 * 64.99724 * 3 2 1 6 6 C 1.34778 * 119.99930 * 274.99738 * 5 3 2 7 7 O 1.21283 * 119.99726 * 0.02562 * 6 5 3 8 8 C 1.50695 * 119.99970 * 180.02562 * 6 5 3 9 9 N 1.46893 * 109.47211 * 180.02562 * 8 6 5 10 10 C 1.46901 * 111.00359 * 66.04460 * 9 8 6 11 11 C 1.46905 * 111.00005 * 189.99911 * 9 8 6 12 12 C 1.50707 * 109.47135 * 169.99890 * 11 9 8 13 13 H 1.08008 * 119.99537 * 0.02562 * 12 11 9 14 14 C 1.37874 * 120.00208 * 179.97438 * 12 11 9 15 15 N 1.31519 * 119.99762 * 0.02562 * 14 12 11 16 16 Si 1.86796 * 120.00141 * 179.97438 * 14 12 11 17 17 H 1.48500 * 109.47190 * 0.02562 * 16 14 12 18 18 H 1.48500 * 109.46932 * 120.00167 * 16 14 12 19 19 H 1.48493 * 109.47535 * 240.00116 * 16 14 12 20 20 C 1.50696 * 109.46922 * 184.99674 * 3 2 1 21 21 C 1.38247 * 119.98658 * 100.00234 * 20 3 2 22 22 C 1.38216 * 120.01497 * 179.97438 * 21 20 3 23 23 C 1.38357 * 119.98603 * 0.02562 * 22 21 20 24 24 Cl 1.73599 * 120.01134 * 180.02562 * 23 22 21 25 25 C 1.38347 * 119.97107 * 0.28224 * 23 22 21 26 26 C 1.38219 * 119.98930 * 359.40143 * 25 23 22 27 27 H 1.09011 * 109.47003 * 60.00159 * 1 2 3 28 28 H 1.08998 * 109.47468 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47471 * 300.00880 * 1 2 3 30 30 H 1.09004 * 109.47308 * 239.99494 * 2 1 3 31 31 H 1.09002 * 109.47136 * 120.00010 * 2 1 3 32 32 H 0.97000 * 119.99758 * 95.00531 * 5 3 2 33 33 H 1.09008 * 109.47029 * 300.00379 * 8 6 5 34 34 H 1.09004 * 109.47603 * 60.00003 * 8 6 5 35 35 H 1.09004 * 109.46826 * 59.99668 * 10 9 8 36 36 H 1.08998 * 109.47243 * 180.02562 * 10 9 8 37 37 H 1.08998 * 109.46936 * 300.00230 * 10 9 8 38 38 H 1.08995 * 109.47252 * 289.99336 * 11 9 8 39 39 H 1.08995 * 109.47095 * 50.00432 * 11 9 8 40 40 H 0.97003 * 119.99471 * 179.97438 * 15 14 12 41 41 H 1.08003 * 119.99321 * 359.97438 * 21 20 3 42 42 H 1.08002 * 120.00776 * 180.02562 * 22 21 20 43 43 H 1.08000 * 120.00661 * 179.71600 * 25 23 22 44 44 H 1.07997 * 119.99445 * 180.32231 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 -0.8419 5 7 1.6524 2.0975 1.2518 6 6 0.4351 2.6644 1.3668 7 8 -0.3396 2.6320 0.4342 8 6 0.0365 3.3387 2.6543 9 7 -1.3261 3.8722 2.5262 10 6 -2.3053 2.7866 2.3826 11 6 -1.6621 4.7369 3.6653 12 6 -2.9565 5.4562 3.3853 13 1 -3.4776 5.2874 2.4544 14 6 -3.4760 6.3288 4.3178 15 7 -2.8416 6.5339 5.4515 16 14 -5.0800 7.2209 3.9705 17 1 -5.5903 6.8197 2.6349 18 1 -6.0795 6.8646 5.0094 19 1 -4.8456 8.6871 3.9913 20 6 3.5418 1.4442 -0.1238 21 6 4.1339 1.6871 -1.3492 22 6 5.5113 1.6893 -1.4632 23 6 6.2977 1.4479 -0.3508 24 17 8.0278 1.4512 -0.4932 25 6 5.7045 1.1985 0.8740 26 6 4.3271 1.2030 0.9882 27 1 -0.3633 0.5139 -0.8901 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8899 30 1 1.8933 -0.5139 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 2.2719 2.1232 1.9977 33 1 0.0679 2.6145 3.4685 34 1 0.7279 4.1542 2.8666 35 1 -2.2636 2.1413 3.2601 36 1 -3.3055 3.2095 2.2893 37 1 -2.0731 2.2034 1.4915 38 1 -1.7713 4.1289 4.5633 39 1 -0.8661 5.4664 3.8149 40 1 -3.2069 7.1481 6.1074 41 1 3.5199 1.8752 -2.2176 42 1 5.9737 1.8795 -2.4206 43 1 6.3178 1.0054 1.7418 44 1 3.8640 1.0136 1.9453 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000083219052.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:18:43 Heat of formation + Delta-G solvation = -15.297347 kcal Electronic energy + Delta-G solvation = -24733.633536 eV Core-core repulsion = 21097.733103 eV Total energy + Delta-G solvation = -3635.900434 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -40.47740 -39.25452 -37.07005 -36.28372 -35.26945 -32.61343 -32.35938 -31.47278 -31.10003 -28.30636 -26.93135 -26.06265 -24.02931 -23.37583 -22.49372 -21.30703 -20.39581 -19.96612 -17.82484 -16.86501 -16.56404 -16.11660 -15.63066 -15.56077 -15.18791 -14.67017 -14.35604 -14.17205 -14.00278 -13.93900 -13.80637 -13.61360 -13.08030 -12.75646 -12.66920 -12.37683 -11.95061 -11.84449 -11.80003 -11.47254 -11.42719 -11.23529 -11.17432 -11.04333 -10.90559 -10.81435 -10.66653 -10.51511 -9.96199 -9.47686 -9.44146 -9.12746 -9.02579 -8.86553 -8.43370 -7.22917 -6.02660 -4.02987 0.68336 0.86775 1.74356 2.95394 3.08468 3.32196 3.32677 3.40008 3.46525 4.22300 4.34435 4.44685 4.46282 4.84875 4.88654 4.94656 5.02767 5.04686 5.12467 5.25101 5.33789 5.35814 5.47141 5.59758 5.70712 5.75483 5.79459 5.80643 5.81600 5.91872 6.03378 6.12193 6.30051 6.35068 6.38504 6.46264 6.55091 6.92461 7.23253 7.30401 7.56246 7.81994 8.05946 8.18832 8.48776 8.57402 9.05422 9.61168 11.08477 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.020788 B = 0.002261 C = 0.002125 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1346.597269 B =12382.635182 C =13175.363599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.126 4.126 3 C 0.186 3.814 4 H 0.099 0.901 5 N -0.736 5.736 6 C 0.517 3.483 7 O -0.510 6.510 8 C 0.036 3.964 9 N -0.522 5.522 10 C 0.033 3.967 11 C 0.192 3.808 12 C -0.503 4.503 13 H 0.066 0.934 14 C 0.054 3.946 15 N -0.900 5.900 16 Si 0.899 3.101 17 H -0.271 1.271 18 H -0.285 1.285 19 H -0.284 1.284 20 C -0.081 4.081 21 C -0.095 4.095 22 C -0.107 4.107 23 C -0.037 4.037 24 Cl -0.073 7.073 25 C -0.106 4.106 26 C -0.101 4.101 27 H 0.062 0.938 28 H 0.045 0.955 29 H 0.061 0.939 30 H 0.068 0.932 31 H 0.063 0.937 32 H 0.396 0.604 33 H 0.050 0.950 34 H 0.096 0.904 35 H 0.003 0.997 36 H 0.073 0.927 37 H 0.065 0.935 38 H -0.008 1.008 39 H 0.030 0.970 40 H 0.260 0.740 41 H 0.135 0.865 42 H 0.135 0.865 43 H 0.135 0.865 44 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.702 -14.835 -10.780 26.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.165 4.165 3 C 0.081 3.919 4 H 0.117 0.883 5 N -0.391 5.391 6 C 0.304 3.696 7 O -0.383 6.383 8 C -0.096 4.096 9 N -0.247 5.247 10 C -0.115 4.115 11 C 0.068 3.932 12 C -0.542 4.542 13 H 0.084 0.916 14 C -0.147 4.147 15 N -0.540 5.540 16 Si 0.727 3.273 17 H -0.196 1.196 18 H -0.211 1.211 19 H -0.210 1.210 20 C -0.082 4.082 21 C -0.114 4.114 22 C -0.125 4.125 23 C -0.063 4.063 24 Cl -0.044 7.044 25 C -0.125 4.125 26 C -0.119 4.119 27 H 0.081 0.919 28 H 0.064 0.936 29 H 0.080 0.920 30 H 0.087 0.913 31 H 0.082 0.918 32 H 0.231 0.769 33 H 0.068 0.932 34 H 0.114 0.886 35 H 0.022 0.978 36 H 0.092 0.908 37 H 0.084 0.916 38 H 0.010 0.990 39 H 0.048 0.952 40 H 0.070 0.930 41 H 0.153 0.847 42 H 0.152 0.848 43 H 0.152 0.848 44 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 19.208 -14.445 -11.736 26.746 hybrid contribution -0.154 0.093 1.150 1.164 sum 19.055 -14.352 -10.586 26.098 Atomic orbital electron populations 1.21830 0.94211 1.00657 1.03657 1.21939 0.97396 0.94980 1.02154 1.19827 0.88783 0.94157 0.89132 0.88313 1.46210 1.17603 1.59468 1.15852 1.20942 0.80696 0.77341 0.90631 1.90659 1.50436 1.56967 1.40264 1.21956 0.95826 0.98977 0.92794 1.61854 0.98108 1.18915 1.45799 1.22371 0.97667 0.92842 0.98643 1.19794 0.97187 0.90841 0.85409 1.21196 1.06039 1.23978 1.02984 0.91629 1.24989 0.97801 0.96912 0.95026 1.69969 1.39321 1.36883 1.07869 0.86421 0.83208 0.79398 0.78309 1.19587 1.21144 1.21012 1.20127 0.95471 0.98776 0.93830 1.21017 0.93928 0.98854 0.97555 1.21062 0.93401 1.00148 0.97932 1.20970 0.84636 1.05054 0.95676 1.98379 1.10734 1.97021 1.98285 1.21048 0.94988 1.00080 0.96348 1.20931 0.92691 0.99535 0.98793 0.91937 0.93588 0.91985 0.91297 0.91847 0.76900 0.93213 0.88573 0.97808 0.90798 0.91623 0.99027 0.95197 0.93011 0.84674 0.84754 0.84750 0.84987 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.71 8.51 37.15 0.32 -1.39 16 2 C -0.13 -1.18 5.59 -26.73 -0.15 -1.33 16 3 C 0.19 1.83 2.46 -69.08 -0.17 1.67 16 4 H 0.10 1.14 7.44 -51.93 -0.39 0.76 16 5 N -0.74 -8.09 4.98 -54.93 -0.27 -8.36 16 6 C 0.52 7.92 6.12 -10.99 -0.07 7.85 16 7 O -0.51 -9.38 11.45 5.55 0.06 -9.32 16 8 C 0.04 0.62 5.45 -4.98 -0.03 0.59 16 9 N -0.52 -11.56 4.49 -245.82 -1.10 -12.67 16 10 C 0.03 0.69 9.03 60.07 0.54 1.23 16 11 C 0.19 5.00 4.72 -4.97 -0.02 4.98 16 12 C -0.50 -14.32 8.46 -34.44 -0.29 -14.61 16 13 H 0.07 1.88 7.12 -52.48 -0.37 1.51 16 14 C 0.05 1.53 5.46 -17.82 -0.10 1.43 16 15 N -0.90 -26.68 13.29 55.43 0.74 -25.94 16 16 Si 0.90 21.88 29.54 -169.99 -5.02 16.85 16 17 H -0.27 -6.53 7.11 56.52 0.40 -6.13 16 18 H -0.29 -6.84 7.11 56.52 0.40 -6.44 16 19 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 20 C -0.08 -0.68 4.95 -104.62 -0.52 -1.20 16 21 C -0.09 -0.74 9.67 -39.59 -0.38 -1.12 16 22 C -0.11 -0.81 9.83 -39.55 -0.39 -1.20 16 23 C -0.04 -0.30 6.32 -39.50 -0.25 -0.55 16 24 Cl -0.07 -0.58 28.96 -51.86 -1.50 -2.08 16 25 C -0.11 -0.80 9.83 -39.55 -0.39 -1.18 16 26 C -0.10 -0.75 9.05 -39.59 -0.36 -1.11 16 27 H 0.06 0.81 7.85 -51.92 -0.41 0.40 16 28 H 0.05 0.48 8.14 -51.93 -0.42 0.05 16 29 H 0.06 0.86 5.64 -51.93 -0.29 0.57 16 30 H 0.07 0.56 8.14 -51.93 -0.42 0.14 16 31 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 32 H 0.40 3.41 6.87 -40.82 -0.28 3.13 16 33 H 0.05 0.78 8.12 -51.92 -0.42 0.35 16 34 H 0.10 1.55 7.93 -51.93 -0.41 1.14 16 35 H 0.00 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.07 1.65 6.76 -51.93 -0.35 1.30 16 37 H 0.07 1.29 5.88 -51.93 -0.31 0.99 16 38 H -0.01 -0.22 8.12 -51.93 -0.42 -0.64 16 39 H 0.03 0.81 7.93 -51.93 -0.41 0.40 16 40 H 0.26 7.27 8.31 -40.82 -0.34 6.93 16 41 H 0.14 0.87 8.04 -52.48 -0.42 0.45 16 42 H 0.13 0.81 8.06 -52.49 -0.42 0.39 16 43 H 0.13 0.81 8.06 -52.49 -0.42 0.38 16 44 H 0.13 0.77 6.91 -52.49 -0.36 0.41 16 LS Contribution 371.08 15.07 5.59 5.59 Total: -1.00 -32.16 371.08 -10.28 -42.44 By element: Atomic # 1 Polarization: 5.95 SS G_CDS: -6.52 Total: -0.57 kcal Atomic # 6 Polarization: -3.69 SS G_CDS: -2.25 Total: -5.95 kcal Atomic # 7 Polarization: -46.33 SS G_CDS: -0.64 Total: -46.97 kcal Atomic # 8 Polarization: -9.38 SS G_CDS: 0.06 Total: -9.32 kcal Atomic # 14 Polarization: 21.88 SS G_CDS: -5.02 Total: 16.85 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -1.50 Total: -2.08 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -32.16 -10.28 -42.44 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000083219052.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.144 kcal (2) G-P(sol) polarization free energy of solvation -32.159 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.015 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.282 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.441 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.297 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds