Wall clock time and date at job start Tue Mar 31 2020 14:18:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52994 * 109.46774 * 2 1 4 4 H 1.08998 * 109.47657 * 305.00053 * 3 2 1 5 5 N 1.46505 * 109.47326 * 65.00445 * 3 2 1 6 6 C 1.34782 * 119.99417 * 274.99636 * 5 3 2 7 7 O 1.21274 * 120.00112 * 359.97438 * 6 5 3 8 8 C 1.50707 * 119.99294 * 179.97438 * 6 5 3 9 9 N 1.46500 * 109.46407 * 179.97438 * 8 6 5 10 10 C 1.36936 * 120.00371 * 269.99664 * 9 8 6 11 11 H 1.08002 * 120.00350 * 188.57090 * 10 9 8 12 12 C 1.38812 * 119.99935 * 8.57658 * 10 9 8 13 13 N 1.31621 * 119.99743 * 24.78762 * 12 10 9 14 14 Si 1.86791 * 120.00238 * 204.79246 * 12 10 9 15 15 H 1.48506 * 109.47454 * 89.99940 * 14 12 10 16 16 H 1.48506 * 109.47547 * 209.99553 * 14 12 10 17 17 H 1.48502 * 109.47096 * 329.99820 * 14 12 10 18 18 C 1.46497 * 119.99919 * 90.00597 * 9 8 6 19 19 C 1.53000 * 109.47551 * 92.16628 * 18 9 8 20 20 C 1.50701 * 109.47247 * 185.00119 * 3 2 1 21 21 C 1.38237 * 119.98899 * 99.99556 * 20 3 2 22 22 C 1.38217 * 120.01772 * 179.97438 * 21 20 3 23 23 C 1.38355 * 119.98125 * 0.02562 * 22 21 20 24 24 Cl 1.73598 * 120.01021 * 180.02562 * 23 22 21 25 25 C 1.38348 * 119.97630 * 0.27920 * 23 22 21 26 26 C 1.38221 * 119.98770 * 359.39848 * 25 23 22 27 27 H 1.09002 * 109.46886 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47245 * 299.99442 * 1 2 3 29 29 H 1.09000 * 109.47322 * 59.99878 * 1 2 3 30 30 H 1.08993 * 109.46699 * 240.00199 * 2 1 3 31 31 H 1.08995 * 109.46888 * 120.00190 * 2 1 3 32 32 H 0.96991 * 120.00366 * 94.99734 * 5 3 2 33 33 H 1.08994 * 109.47278 * 300.00236 * 8 6 5 34 34 H 1.08993 * 109.47108 * 60.00642 * 8 6 5 35 35 H 0.97000 * 119.99926 * 180.02562 * 13 12 10 36 36 H 1.08997 * 109.47389 * 212.16652 * 18 9 8 37 37 H 1.09007 * 109.47228 * 332.16068 * 18 9 8 38 38 H 1.08999 * 109.47260 * 180.02562 * 19 18 9 39 39 H 1.09002 * 109.46863 * 299.99647 * 19 18 9 40 40 H 1.08997 * 109.47180 * 59.99589 * 19 18 9 41 41 H 1.08003 * 119.99067 * 0.02562 * 21 20 3 42 42 H 1.07995 * 120.00657 * 180.02562 * 22 21 20 43 43 H 1.07998 * 120.01002 * 179.71928 * 25 23 22 44 44 H 1.07994 * 119.99497 * 180.32177 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9816 -0.8418 5 7 1.6524 2.0975 1.2519 6 6 0.4351 2.6644 1.3670 7 8 -0.3393 2.6327 0.4342 8 6 0.0363 3.3376 2.6550 9 7 -1.3222 3.8709 2.5268 10 6 -1.5167 5.1460 2.0671 11 1 -2.5013 5.5885 2.1023 12 6 -0.4484 5.8700 1.5557 13 7 0.5949 5.2406 1.0579 14 14 -0.4914 7.7373 1.5740 15 1 0.1008 8.2337 2.8421 16 1 0.2890 8.2618 0.4246 17 1 -1.8983 8.2011 1.4699 18 6 -2.4726 3.0400 2.8906 19 6 -2.8389 3.2891 4.3551 20 6 3.5419 1.4444 -0.1239 21 6 4.1338 1.6873 -1.3493 22 6 5.5112 1.6897 -1.4634 23 6 6.2976 1.4484 -0.3509 24 17 8.0278 1.4520 -0.4934 25 6 5.7046 1.1992 0.8739 26 6 4.3271 1.2036 0.9882 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5137 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5138 0.8899 32 1 2.2719 2.1232 1.9978 33 1 0.0674 2.6130 3.4685 34 1 0.7276 4.1529 2.8680 35 1 1.3416 5.7464 0.7009 36 1 -3.3207 3.2955 2.2555 37 1 -2.2195 1.9887 2.7532 38 1 -3.6946 2.6706 4.6259 39 1 -1.9908 3.0335 4.9903 40 1 -3.0920 4.3404 4.4925 41 1 3.5198 1.8760 -2.2175 42 1 5.9735 1.8799 -2.4207 43 1 6.3179 1.0063 1.7417 44 1 3.8642 1.0142 1.9453 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000121025569.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:18:49 Heat of formation + Delta-G solvation = 4.672796 kcal Electronic energy + Delta-G solvation = -25847.153607 eV Core-core repulsion = 22212.119144 eV Total energy + Delta-G solvation = -3635.034463 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -39.84214 -38.34080 -36.67698 -35.79823 -34.49736 -31.87570 -31.66208 -31.07192 -30.60951 -29.12970 -26.88278 -25.36849 -23.56673 -22.98028 -22.08490 -20.96108 -20.07856 -19.22592 -17.49148 -16.71776 -15.94609 -15.74061 -15.22269 -14.99983 -14.66889 -14.38443 -13.77815 -13.74227 -13.61950 -13.56203 -13.41772 -12.78479 -12.65306 -12.33239 -12.23293 -12.10261 -11.65474 -11.57759 -11.42727 -11.28540 -11.05498 -10.98419 -10.90355 -10.74301 -10.71123 -10.50397 -10.33411 -10.08502 -9.84948 -9.77100 -9.09695 -8.75092 -8.60954 -8.17686 -7.98207 -6.87839 -5.78507 -3.03219 1.08526 1.23906 2.03644 3.41321 3.49250 3.50136 3.55670 4.16294 4.33536 4.58132 4.72304 4.75275 4.80806 5.26072 5.33719 5.37602 5.45414 5.47840 5.49955 5.60122 5.76896 5.83793 5.98694 6.03257 6.14716 6.15865 6.21885 6.27688 6.28317 6.32647 6.36305 6.46901 6.58521 6.59449 6.74647 6.79278 6.84975 6.89270 7.10662 7.21203 7.49788 7.81102 8.28474 8.67609 9.19552 9.75769 9.92108 10.30689 11.31381 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.013762 B = 0.003563 C = 0.003099 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2034.110087 B = 7857.415100 C = 9033.241904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.123 4.123 3 C 0.188 3.812 4 H 0.092 0.908 5 N -0.744 5.744 6 C 0.533 3.467 7 O -0.524 6.524 8 C 0.163 3.837 9 N -0.574 5.574 10 C -0.242 4.242 11 H 0.076 0.924 12 C -0.001 4.001 13 N -0.897 5.897 14 Si 0.899 3.101 15 H -0.290 1.290 16 H -0.295 1.295 17 H -0.282 1.282 18 C 0.147 3.853 19 C -0.165 4.165 20 C -0.068 4.068 21 C -0.097 4.097 22 C -0.108 4.108 23 C -0.041 4.041 24 Cl -0.081 7.081 25 C -0.108 4.108 26 C -0.100 4.100 27 H 0.036 0.964 28 H 0.064 0.936 29 H 0.058 0.942 30 H 0.059 0.941 31 H 0.057 0.943 32 H 0.384 0.616 33 H 0.033 0.967 34 H 0.101 0.899 35 H 0.252 0.748 36 H 0.044 0.956 37 H 0.034 0.966 38 H 0.038 0.962 39 H 0.043 0.957 40 H 0.052 0.948 41 H 0.133 0.867 42 H 0.131 0.869 43 H 0.131 0.869 44 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.066 -11.389 0.256 15.202 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.162 4.162 3 C 0.082 3.918 4 H 0.110 0.890 5 N -0.400 5.400 6 C 0.320 3.680 7 O -0.397 6.397 8 C 0.032 3.968 9 N -0.294 5.294 10 C -0.371 4.371 11 H 0.094 0.906 12 C -0.199 4.199 13 N -0.543 5.543 14 Si 0.730 3.270 15 H -0.217 1.217 16 H -0.222 1.222 17 H -0.207 1.207 18 C 0.020 3.980 19 C -0.225 4.225 20 C -0.069 4.069 21 C -0.116 4.116 22 C -0.127 4.127 23 C -0.068 4.068 24 Cl -0.052 7.052 25 C -0.127 4.127 26 C -0.119 4.119 27 H 0.055 0.945 28 H 0.083 0.917 29 H 0.078 0.922 30 H 0.078 0.922 31 H 0.076 0.924 32 H 0.217 0.783 33 H 0.051 0.949 34 H 0.119 0.881 35 H 0.062 0.938 36 H 0.063 0.937 37 H 0.053 0.947 38 H 0.057 0.943 39 H 0.062 0.938 40 H 0.071 0.929 41 H 0.151 0.849 42 H 0.149 0.851 43 H 0.149 0.851 44 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 9.681 -11.287 -0.519 14.879 hybrid contribution 0.775 1.153 0.064 1.391 sum 10.455 -10.134 -0.456 14.568 Atomic orbital electron populations 1.21775 0.94449 0.99607 1.03921 1.21919 0.97293 0.95812 1.01192 1.19654 0.87769 0.93314 0.91048 0.88967 1.46383 1.18504 1.60858 1.14209 1.22010 0.79542 0.74127 0.92367 1.90505 1.51989 1.56693 1.40499 1.20687 0.88820 0.96568 0.90682 1.43894 0.99258 1.12189 1.74074 1.19233 0.95376 0.87531 1.34937 0.90597 1.24645 0.97874 0.97965 0.99380 1.69897 1.09270 1.33361 1.41747 0.86307 0.77341 0.86405 0.76953 1.21747 1.22175 1.20745 1.20699 0.90763 0.93429 0.93081 1.22325 0.99334 1.01139 0.99692 1.20289 0.96331 0.96859 0.93377 1.21032 0.93761 0.98965 0.97819 1.21007 0.93459 1.00506 0.97735 1.20889 0.84068 1.06063 0.95762 1.98356 1.11383 1.97160 1.98313 1.20997 0.95027 1.00565 0.96107 1.20930 0.92477 0.99590 0.98888 0.94454 0.91693 0.92244 0.92203 0.92377 0.78338 0.94871 0.88104 0.93801 0.93730 0.94709 0.94345 0.93808 0.92882 0.84939 0.85112 0.85093 0.85061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.26 8.52 37.16 0.32 -1.94 16 2 C -0.12 -1.72 5.59 -26.73 -0.15 -1.86 16 3 C 0.19 2.95 2.46 -69.08 -0.17 2.78 16 4 H 0.09 1.75 7.44 -51.93 -0.39 1.36 16 5 N -0.74 -12.92 4.98 -54.93 -0.27 -13.19 16 6 C 0.53 11.66 4.46 -10.98 -0.05 11.61 16 7 O -0.52 -13.43 13.30 5.56 0.07 -13.36 16 8 C 0.16 3.63 5.42 -5.19 -0.03 3.60 16 9 N -0.57 -13.94 2.02 -174.61 -0.35 -14.30 16 10 C -0.24 -6.53 9.70 -15.06 -0.15 -6.67 16 11 H 0.08 2.05 7.94 -52.49 -0.42 1.63 16 12 C 0.00 -0.04 4.90 -17.43 -0.09 -0.13 16 13 N -0.90 -24.71 8.95 55.49 0.50 -24.21 16 14 Si 0.90 21.75 29.62 -169.99 -5.03 16.71 16 15 H -0.29 -6.97 7.11 56.52 0.40 -6.56 16 16 H -0.29 -7.33 7.11 56.52 0.40 -6.93 16 17 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 18 C 0.15 3.05 6.39 -4.04 -0.03 3.02 16 19 C -0.17 -2.89 10.23 37.16 0.38 -2.51 16 20 C -0.07 -0.91 4.96 -104.62 -0.52 -1.43 16 21 C -0.10 -1.22 9.67 -39.59 -0.38 -1.61 16 22 C -0.11 -1.26 9.83 -39.55 -0.39 -1.65 16 23 C -0.04 -0.48 6.32 -39.50 -0.25 -0.73 16 24 Cl -0.08 -0.87 28.96 -51.86 -1.50 -2.37 16 25 C -0.11 -1.21 9.83 -39.55 -0.39 -1.60 16 26 C -0.10 -1.19 9.05 -39.58 -0.36 -1.55 16 27 H 0.04 0.52 8.14 -51.93 -0.42 0.09 16 28 H 0.06 1.21 5.65 -51.93 -0.29 0.92 16 29 H 0.06 1.06 7.85 -51.93 -0.41 0.66 16 30 H 0.06 0.75 8.14 -51.93 -0.42 0.32 16 31 H 0.06 0.74 8.14 -51.93 -0.42 0.32 16 32 H 0.38 5.77 6.87 -40.82 -0.28 5.49 16 33 H 0.03 0.64 8.07 -51.93 -0.42 0.22 16 34 H 0.10 2.44 6.29 -51.93 -0.33 2.11 16 35 H 0.25 6.93 8.31 -40.82 -0.34 6.59 16 36 H 0.04 0.96 8.06 -51.93 -0.42 0.54 16 37 H 0.03 0.69 8.06 -51.93 -0.42 0.27 16 38 H 0.04 0.57 8.14 -51.93 -0.42 0.14 16 39 H 0.04 0.74 8.14 -51.93 -0.42 0.31 16 40 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 41 H 0.13 1.54 8.04 -52.48 -0.42 1.12 16 42 H 0.13 1.28 8.06 -52.49 -0.42 0.86 16 43 H 0.13 1.21 8.06 -52.49 -0.42 0.79 16 44 H 0.13 1.35 6.91 -52.49 -0.36 0.98 16 LS Contribution 370.92 15.07 5.59 5.59 Total: -1.00 -30.45 370.92 -9.91 -40.37 By element: Atomic # 1 Polarization: 12.08 SS G_CDS: -6.67 Total: 5.41 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: -2.24 Total: -0.65 kcal Atomic # 7 Polarization: -51.57 SS G_CDS: -0.13 Total: -51.70 kcal Atomic # 8 Polarization: -13.43 SS G_CDS: 0.07 Total: -13.36 kcal Atomic # 14 Polarization: 21.75 SS G_CDS: -5.03 Total: 16.71 kcal Atomic # 17 Polarization: -0.87 SS G_CDS: -1.50 Total: -2.37 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -30.45 -9.91 -40.37 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000121025569.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.040 kcal (2) G-P(sol) polarization free energy of solvation -30.453 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.915 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.367 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.673 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds