Wall clock time and date at job start Tue Mar 31 2020 14:06:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52999 * 109.46623 * 2 1 4 4 C 1.52997 * 109.47127 * 119.99936 * 2 1 3 5 5 N 1.46505 * 109.47212 * 300.00138 * 4 2 1 6 6 C 1.34771 * 119.99622 * 179.97438 * 5 4 2 7 7 O 1.21584 * 120.00541 * 0.02562 * 6 5 4 8 8 N 1.34781 * 119.99489 * 180.02562 * 6 5 4 9 9 C 1.46505 * 119.99511 * 180.02562 * 8 6 5 10 10 C 1.53007 * 109.46736 * 179.97438 * 9 8 6 11 11 C 1.50697 * 109.47033 * 179.97438 * 10 9 8 12 12 H 1.07998 * 119.99931 * 0.02562 * 11 10 9 13 13 C 1.37878 * 119.99890 * 179.97438 * 11 10 9 14 14 N 1.31510 * 120.00276 * 0.02562 * 13 11 10 15 15 Si 1.86808 * 119.99883 * 180.02562 * 13 11 10 16 16 H 1.48507 * 109.46649 * 60.00505 * 15 13 11 17 17 H 1.48498 * 109.46941 * 180.02562 * 15 13 11 18 18 H 1.48492 * 109.47175 * 300.00441 * 15 13 11 19 19 C 1.50697 * 109.47239 * 240.00432 * 2 1 3 20 20 C 1.38267 * 119.99209 * 239.72155 * 19 2 1 21 21 C 1.38219 * 120.02604 * 179.76443 * 20 19 2 22 22 C 1.38235 * 120.01268 * 0.50953 * 21 20 19 23 23 C 1.38329 * 119.98583 * 359.74727 * 22 21 20 24 24 Cl 1.73602 * 120.01301 * 180.02562 * 23 22 21 25 25 C 1.38191 * 119.99712 * 59.99739 * 19 2 1 26 26 H 1.08993 * 109.46955 * 300.00075 * 1 2 3 27 27 H 1.09000 * 109.47050 * 59.99904 * 1 2 3 28 28 H 1.09001 * 109.47002 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.46716 * 179.97438 * 3 2 1 30 30 H 1.09000 * 109.47486 * 299.99829 * 3 2 1 31 31 H 1.09001 * 109.47362 * 60.00551 * 3 2 1 32 32 H 1.09002 * 109.47153 * 180.02562 * 4 2 1 33 33 H 1.09001 * 109.46832 * 60.00321 * 4 2 1 34 34 H 0.96996 * 119.99606 * 0.02562 * 5 4 2 35 35 H 0.97003 * 120.00377 * 0.02562 * 8 6 5 36 36 H 1.08994 * 109.47121 * 299.99693 * 9 8 6 37 37 H 1.08994 * 109.47503 * 60.00345 * 9 8 6 38 38 H 1.08994 * 109.47144 * 299.99776 * 10 9 8 39 39 H 1.09004 * 109.46808 * 60.00030 * 10 9 8 40 40 H 0.96998 * 120.00482 * 180.02562 * 14 13 11 41 41 H 1.07996 * 119.98373 * 359.97438 * 20 19 2 42 42 H 1.08001 * 119.99109 * 180.25606 * 21 20 19 43 43 H 1.07996 * 120.00739 * 179.76462 * 22 21 20 44 44 H 1.08007 * 120.00365 * 359.95623 * 25 19 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7212 1.2492 5 7 1.5517 -0.0306 2.4454 6 6 1.8769 -0.4914 3.6695 7 8 2.5759 -1.4800 3.7810 8 7 1.4272 0.1436 4.7699 9 6 1.7812 -0.3570 6.1005 10 6 1.1479 0.5385 7.1673 11 6 1.5115 0.0233 8.5360 12 1 2.1324 -0.8547 8.6351 13 6 1.0522 0.6735 9.6618 14 7 0.2965 1.7430 9.5412 15 14 1.5035 0.0352 11.3585 16 1 2.9802 0.0467 11.5149 17 1 0.8887 0.9043 12.3939 18 1 0.9998 -1.3529 11.5152 19 6 2.0324 -0.7103 -1.2305 20 6 2.8321 -1.8311 -1.1035 21 6 3.2892 -2.4860 -2.2316 22 6 2.9558 -2.0145 -3.4876 23 6 2.1602 -0.8902 -3.6152 24 17 1.7405 -0.2979 -5.1922 25 6 1.6985 -0.2381 -2.4855 26 1 -0.3633 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6766 1.9564 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 3.1301 -0.7208 1.2495 33 1 1.6767 -1.7489 1.2492 34 1 0.9937 0.7578 2.3564 35 1 0.8692 0.9321 4.6810 36 1 1.4121 -1.3761 6.2153 37 1 2.8650 -0.3478 6.2157 38 1 1.5173 1.5575 7.0524 39 1 0.0640 0.5298 7.0523 40 1 -0.0264 2.2006 10.3332 41 1 3.0968 -2.1969 -0.1225 42 1 3.9104 -3.3638 -2.1317 43 1 3.3162 -2.5241 -4.3689 44 1 1.0769 0.6397 -2.5846 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273174833.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:06:37 Heat of formation + Delta-G solvation = -34.070548 kcal Electronic energy + Delta-G solvation = -24135.502322 eV Core-core repulsion = 20498.787821 eV Total energy + Delta-G solvation = -3636.714501 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -40.59019 -39.42475 -37.43966 -36.51452 -34.80187 -33.46327 -32.74187 -31.24831 -30.22873 -29.47565 -27.61339 -26.71328 -24.58480 -23.34166 -22.67452 -21.07215 -20.58054 -19.67794 -18.30168 -17.27831 -16.39675 -16.16266 -15.69284 -15.52982 -15.35822 -14.61330 -14.56372 -14.37787 -14.33727 -13.93579 -13.83656 -13.58122 -13.37382 -13.21438 -12.65727 -12.41825 -12.26432 -12.10244 -12.07589 -11.83619 -11.56775 -11.35641 -11.18971 -11.03465 -11.00784 -10.89472 -10.64416 -10.30319 -9.95284 -9.55222 -9.28624 -9.27114 -9.06618 -9.00322 -8.47528 -8.23872 -6.08583 -4.11213 0.77492 0.86696 1.73724 3.02614 3.22300 3.31870 3.35581 3.39340 3.60134 4.11889 4.22727 4.40490 4.53322 4.60852 4.66459 4.71472 4.77376 4.85502 5.01482 5.26019 5.28358 5.28451 5.38989 5.44426 5.45554 5.60747 5.63312 5.69435 5.78166 5.86576 5.95125 5.96744 6.14863 6.30229 6.39788 6.40707 6.59168 6.78537 7.00729 7.22992 7.57239 7.64008 7.90487 8.26525 8.43659 8.93291 9.00482 9.53421 11.03006 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.039830 B = 0.001813 C = 0.001756 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 702.815205 B =15443.125970 C =15944.278409 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.036 4.036 3 C -0.141 4.141 4 C 0.150 3.850 5 N -0.751 5.751 6 C 0.699 3.301 7 O -0.599 6.599 8 N -0.739 5.739 9 C 0.140 3.860 10 C 0.013 3.987 11 C -0.521 4.521 12 H 0.059 0.941 13 C 0.059 3.941 14 N -0.895 5.895 15 Si 0.897 3.103 16 H -0.276 1.276 17 H -0.287 1.287 18 H -0.276 1.276 19 C -0.052 4.052 20 C -0.115 4.115 21 C -0.102 4.102 22 C -0.117 4.117 23 C -0.033 4.033 24 Cl -0.074 7.074 25 C -0.104 4.104 26 H 0.064 0.936 27 H 0.061 0.939 28 H 0.062 0.938 29 H 0.062 0.938 30 H 0.061 0.939 31 H 0.064 0.936 32 H 0.068 0.932 33 H 0.068 0.932 34 H 0.393 0.607 35 H 0.393 0.607 36 H 0.054 0.946 37 H 0.054 0.946 38 H 0.022 0.978 39 H 0.022 0.978 40 H 0.262 0.738 41 H 0.137 0.863 42 H 0.133 0.867 43 H 0.131 0.869 44 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.563 -2.195 -29.513 29.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.037 4.037 3 C -0.198 4.198 4 C 0.025 3.975 5 N -0.409 5.409 6 C 0.398 3.602 7 O -0.478 6.478 8 N -0.392 5.392 9 C 0.018 3.982 10 C -0.025 4.025 11 C -0.560 4.560 12 H 0.077 0.923 13 C -0.143 4.143 14 N -0.534 5.534 15 Si 0.725 3.275 16 H -0.201 1.201 17 H -0.213 1.213 18 H -0.201 1.201 19 C -0.053 4.053 20 C -0.133 4.133 21 C -0.120 4.120 22 C -0.135 4.135 23 C -0.059 4.059 24 Cl -0.046 7.046 25 C -0.123 4.123 26 H 0.083 0.917 27 H 0.080 0.920 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.080 0.920 31 H 0.083 0.917 32 H 0.086 0.914 33 H 0.086 0.914 34 H 0.228 0.772 35 H 0.226 0.774 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.040 0.960 39 H 0.040 0.960 40 H 0.072 0.928 41 H 0.155 0.845 42 H 0.151 0.849 43 H 0.149 0.851 44 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.087 -2.935 -29.402 29.622 hybrid contribution -0.372 0.526 0.666 0.927 sum 1.715 -2.409 -28.736 28.888 Atomic orbital electron populations 1.21921 0.92707 1.02816 1.02353 1.19742 0.96592 0.95811 0.91544 1.21922 1.01826 0.93698 1.02354 1.21230 0.98938 0.95553 0.81794 1.45144 1.57712 1.33629 1.04450 1.16043 0.80595 0.83148 0.80384 1.90885 1.43084 1.27764 1.86029 1.45532 1.55406 1.32370 1.05917 1.21585 0.99575 0.98517 0.78573 1.19322 0.96287 0.94777 0.92067 1.21016 1.31999 1.12606 0.90371 0.92271 1.24994 0.94952 0.94889 0.99459 1.69941 1.34711 1.18974 1.29727 0.86569 0.78798 0.78813 0.83330 1.20111 1.21269 1.20118 1.19597 0.96955 0.95356 0.93389 1.21421 0.97010 0.95084 0.99811 1.21156 0.99450 0.99902 0.91513 1.21071 0.98322 0.95515 0.98618 1.20883 1.01430 0.97395 0.86237 1.98376 1.92470 1.88013 1.25703 1.20825 1.00699 1.00411 0.90348 0.91700 0.92043 0.91932 0.91934 0.92037 0.91703 0.91379 0.91379 0.77203 0.77443 0.92799 0.92806 0.95980 0.95985 0.92818 0.84490 0.84884 0.85076 0.84935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.00 8.11 37.16 0.30 -0.70 16 2 C -0.04 -0.28 0.61 -155.66 -0.10 -0.38 16 3 C -0.14 -1.00 8.11 37.16 0.30 -0.70 16 4 C 0.15 1.56 3.22 -4.04 -0.01 1.55 16 5 N -0.75 -8.98 4.96 -65.22 -0.32 -9.30 16 6 C 0.70 11.93 8.57 -86.92 -0.74 11.19 16 7 O -0.60 -12.67 16.34 5.29 0.09 -12.59 16 8 N -0.74 -12.87 5.56 -65.22 -0.36 -13.23 16 9 C 0.14 3.01 5.61 -4.04 -0.02 2.98 16 10 C 0.01 0.32 5.09 -27.88 -0.14 0.18 16 11 C -0.52 -14.45 9.11 -34.44 -0.31 -14.76 16 12 H 0.06 1.61 7.74 -52.49 -0.41 1.20 16 13 C 0.06 1.65 5.46 -17.82 -0.10 1.55 16 14 N -0.89 -26.05 13.29 55.43 0.74 -25.31 16 15 Si 0.90 21.37 29.54 -169.99 -5.02 16.34 16 16 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 17 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 18 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 19 C -0.05 -0.42 4.76 -104.63 -0.50 -0.91 16 20 C -0.12 -0.93 8.98 -39.58 -0.36 -1.29 16 21 C -0.10 -0.73 10.05 -39.59 -0.40 -1.13 16 22 C -0.12 -0.85 9.83 -39.55 -0.39 -1.24 16 23 C -0.03 -0.26 6.32 -39.50 -0.25 -0.51 16 24 Cl -0.07 -0.58 28.96 -51.86 -1.50 -2.08 16 25 C -0.10 -0.81 8.50 -39.55 -0.34 -1.14 16 26 H 0.06 0.44 6.86 -51.93 -0.36 0.09 16 27 H 0.06 0.37 7.39 -51.93 -0.38 -0.01 16 28 H 0.06 0.49 8.14 -51.93 -0.42 0.06 16 29 H 0.06 0.49 8.14 -51.93 -0.42 0.06 16 30 H 0.06 0.37 7.39 -51.93 -0.38 -0.01 16 31 H 0.06 0.44 6.86 -51.93 -0.36 0.09 16 32 H 0.07 0.77 7.50 -51.93 -0.39 0.38 16 33 H 0.07 0.77 7.53 -51.93 -0.39 0.38 16 34 H 0.39 3.68 6.18 -40.82 -0.25 3.42 16 35 H 0.39 5.83 8.49 -40.82 -0.35 5.48 16 36 H 0.05 1.21 8.14 -51.93 -0.42 0.78 16 37 H 0.05 1.20 8.14 -51.93 -0.42 0.78 16 38 H 0.02 0.56 8.14 -51.93 -0.42 0.14 16 39 H 0.02 0.56 8.14 -51.93 -0.42 0.14 16 40 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 41 H 0.14 1.10 5.89 -52.49 -0.31 0.79 16 42 H 0.13 0.70 8.06 -52.49 -0.42 0.28 16 43 H 0.13 0.75 8.06 -52.49 -0.42 0.33 16 44 H 0.13 0.88 7.10 -52.48 -0.37 0.50 16 LS Contribution 374.49 15.07 5.64 5.64 Total: -1.00 -32.26 374.49 -10.26 -42.52 By element: Atomic # 1 Polarization: 9.78 SS G_CDS: -6.46 Total: 3.31 kcal Atomic # 6 Polarization: -2.27 SS G_CDS: -3.05 Total: -5.32 kcal Atomic # 7 Polarization: -47.89 SS G_CDS: 0.05 Total: -47.84 kcal Atomic # 8 Polarization: -12.67 SS G_CDS: 0.09 Total: -12.59 kcal Atomic # 14 Polarization: 21.37 SS G_CDS: -5.02 Total: 16.34 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -1.50 Total: -2.08 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -32.26 -10.26 -42.52 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273174833.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.452 kcal (2) G-P(sol) polarization free energy of solvation -32.265 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.813 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.258 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.522 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds