Wall clock time and date at job start Tue Mar 31 2020 14:20:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 H 1.09001 * 109.47563 * 305.00337 * 3 2 1 5 5 C 1.52997 * 109.47448 * 184.99813 * 3 2 1 6 6 C 1.50710 * 109.47272 * 175.00070 * 5 3 2 7 7 C 1.38238 * 119.98415 * 269.73114 * 6 5 3 8 8 C 1.38216 * 120.01178 * 179.72437 * 7 6 5 9 9 C 1.38355 * 119.98534 * 0.54916 * 8 7 6 10 10 Cl 1.73592 * 120.01474 * 179.70338 * 9 8 7 11 11 C 1.38360 * 119.97133 * 359.72207 * 9 8 7 12 12 C 1.38215 * 119.98457 * 0.02562 * 11 9 8 13 13 N 1.46502 * 109.47005 * 64.99872 * 3 2 1 14 14 C 1.34776 * 120.00080 * 275.00208 * 13 3 2 15 15 O 1.21586 * 119.99932 * 359.97438 * 14 13 3 16 16 N 1.34782 * 119.99655 * 180.02562 * 14 13 3 17 17 C 1.46508 * 119.99384 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.46666 * 179.97438 * 17 16 14 19 19 C 1.50697 * 109.47219 * 179.97438 * 18 17 16 20 20 H 1.08009 * 119.99906 * 0.02562 * 19 18 17 21 21 C 1.37876 * 120.00265 * 179.97438 * 19 18 17 22 22 N 1.31509 * 119.99919 * 0.02562 * 21 19 18 23 23 Si 1.86807 * 119.99861 * 180.02562 * 21 19 18 24 24 H 1.48502 * 109.46931 * 60.00551 * 23 21 19 25 25 H 1.48503 * 109.46857 * 180.02562 * 23 21 19 26 26 H 1.48497 * 109.47000 * 299.99932 * 23 21 19 27 27 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 28 28 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 29 29 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 30 30 H 1.09002 * 109.47153 * 120.00216 * 2 1 3 31 31 H 1.08998 * 109.47533 * 239.99846 * 2 1 3 32 32 H 1.09001 * 109.47310 * 295.00266 * 5 3 2 33 33 H 1.09002 * 109.47223 * 55.00225 * 5 3 2 34 34 H 1.08001 * 119.99900 * 359.97438 * 7 6 5 35 35 H 1.08000 * 120.00914 * 180.27062 * 8 7 6 36 36 H 1.07997 * 120.00424 * 180.02562 * 11 9 8 37 37 H 1.08000 * 119.98713 * 179.97438 * 12 11 9 38 38 H 0.97001 * 119.99703 * 95.00546 * 13 3 2 39 39 H 0.96996 * 120.00288 * 359.97438 * 16 14 13 40 40 H 1.09001 * 109.46870 * 299.99537 * 17 16 14 41 41 H 1.08995 * 109.47359 * 60.00109 * 17 16 14 42 42 H 1.08998 * 109.47460 * 300.00037 * 18 17 16 43 43 H 1.09005 * 109.47118 * 59.99590 * 18 17 16 44 44 H 0.97005 * 119.99899 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6054 1.9815 -0.8418 5 6 3.5648 1.4442 -0.1257 6 6 4.0571 2.8633 -0.2492 7 6 4.1899 3.4423 -1.4974 8 6 4.6359 4.7456 -1.6110 9 6 4.9601 5.4669 -0.4758 10 17 5.5276 7.1013 -0.6181 11 6 4.8323 4.8849 0.7729 12 6 4.3813 3.5833 0.8854 13 7 1.6525 2.0974 1.2518 14 6 0.4352 2.6643 1.3670 15 8 -0.3411 2.6326 0.4318 16 7 0.0789 3.2674 2.5185 17 6 -1.2446 3.8831 2.6438 18 6 -1.3935 4.4921 4.0394 19 6 -2.7546 5.1261 4.1683 20 1 -3.4446 5.0972 3.3378 21 6 -3.1194 5.7422 5.3465 22 7 -2.2795 5.7770 6.3578 23 14 -4.8069 6.5274 5.5063 24 1 -5.8546 5.4950 5.3019 25 1 -4.9515 7.1186 6.8609 26 1 -4.9558 7.5932 4.4831 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 1.8933 -0.5139 0.8900 31 1 1.8934 -0.5138 -0.8899 32 1 4.0030 0.9834 0.7597 33 1 3.8571 0.8799 -1.0113 34 1 3.9414 2.8776 -2.3838 35 1 4.7354 5.1993 -2.5860 36 1 5.0849 5.4476 1.6594 37 1 4.2819 3.1288 1.8601 38 1 2.2720 2.1231 1.9978 39 1 0.6984 3.2930 3.2644 40 1 -1.3541 4.6650 1.8922 41 1 -2.0136 3.1253 2.4945 42 1 -1.2840 3.7101 4.7907 43 1 -0.6244 5.2499 4.1892 44 1 -2.5361 6.2107 7.1867 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273624257.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:20:42 Heat of formation + Delta-G solvation = -38.610289 kcal Electronic energy + Delta-G solvation = -24743.184878 eV Core-core repulsion = 21106.273520 eV Total energy + Delta-G solvation = -3636.911359 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -40.22115 -39.33985 -36.97283 -36.28831 -34.61851 -32.95319 -32.37074 -32.01040 -31.30260 -29.38094 -28.17082 -24.81203 -24.05694 -23.14037 -21.60360 -21.33291 -20.71509 -20.38025 -17.97511 -17.34772 -16.56935 -16.18489 -15.74306 -15.63766 -15.26287 -14.54928 -14.31668 -14.20391 -14.04786 -13.80530 -13.63317 -13.51324 -13.30619 -12.85590 -12.69055 -12.28372 -12.24351 -11.90583 -11.57724 -11.53213 -11.29573 -11.16719 -11.03941 -11.01771 -10.97333 -10.78568 -10.62927 -10.26687 -9.82833 -9.51793 -9.29580 -9.24620 -8.91898 -8.73454 -8.45769 -8.20468 -6.07343 -4.09845 0.88231 1.04645 1.93130 3.08358 3.32805 3.35206 3.36419 3.40325 3.66310 4.36708 4.41361 4.45727 4.62904 4.66291 4.75312 4.92268 5.04488 5.09548 5.13962 5.29785 5.31078 5.36035 5.50316 5.53323 5.66801 5.77674 5.89112 5.97705 5.99229 6.04069 6.22239 6.25058 6.34668 6.43053 6.54141 6.59081 6.71827 6.81288 7.06054 7.28660 7.59438 7.65876 7.91941 8.28664 8.49168 8.95197 9.07278 9.54787 11.04284 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.009752 B = 0.003072 C = 0.002468 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2870.600404 B = 9111.425334 C =11340.721260 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.133 4.133 3 C 0.170 3.830 4 H 0.089 0.911 5 C -0.090 4.090 6 C -0.072 4.072 7 C -0.104 4.104 8 C -0.108 4.108 9 C -0.039 4.039 10 Cl -0.075 7.075 11 C -0.105 4.105 12 C -0.099 4.099 13 N -0.746 5.746 14 C 0.700 3.300 15 O -0.592 6.592 16 N -0.740 5.740 17 C 0.142 3.858 18 C 0.014 3.986 19 C -0.521 4.521 20 H 0.059 0.941 21 C 0.059 3.941 22 N -0.895 5.895 23 Si 0.896 3.104 24 H -0.276 1.276 25 H -0.287 1.287 26 H -0.276 1.276 27 H 0.059 0.941 28 H 0.063 0.937 29 H 0.040 0.960 30 H 0.061 0.939 31 H 0.066 0.934 32 H 0.080 0.920 33 H 0.090 0.910 34 H 0.131 0.869 35 H 0.131 0.869 36 H 0.133 0.867 37 H 0.129 0.871 38 H 0.390 0.610 39 H 0.391 0.609 40 H 0.052 0.948 41 H 0.053 0.947 42 H 0.021 0.979 43 H 0.021 0.979 44 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.231 -8.677 -13.735 25.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.171 4.171 3 C 0.064 3.936 4 H 0.107 0.893 5 C -0.128 4.128 6 C -0.072 4.072 7 C -0.123 4.123 8 C -0.127 4.127 9 C -0.065 4.065 10 Cl -0.046 7.046 11 C -0.124 4.124 12 C -0.117 4.117 13 N -0.403 5.403 14 C 0.400 3.600 15 O -0.471 6.471 16 N -0.394 5.394 17 C 0.019 3.981 18 C -0.024 4.024 19 C -0.560 4.560 20 H 0.077 0.923 21 C -0.142 4.142 22 N -0.534 5.534 23 Si 0.724 3.276 24 H -0.201 1.201 25 H -0.213 1.213 26 H -0.201 1.201 27 H 0.078 0.922 28 H 0.082 0.918 29 H 0.059 0.941 30 H 0.079 0.921 31 H 0.084 0.916 32 H 0.099 0.901 33 H 0.108 0.892 34 H 0.149 0.851 35 H 0.149 0.851 36 H 0.151 0.849 37 H 0.147 0.853 38 H 0.223 0.777 39 H 0.224 0.776 40 H 0.071 0.929 41 H 0.071 0.929 42 H 0.039 0.961 43 H 0.039 0.961 44 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 18.534 -8.470 -14.433 24.971 hybrid contribution -0.257 0.748 0.965 1.248 sum 18.277 -7.722 -13.468 23.981 Atomic orbital electron populations 1.21775 0.94446 1.00104 1.03761 1.21976 0.97619 0.95874 1.01677 1.20780 0.92042 0.93125 0.87647 0.89264 1.20983 0.95098 0.92779 1.03961 1.19899 0.97797 0.96399 0.93149 1.20996 0.99297 0.94496 0.97473 1.21034 0.99556 0.94427 0.97675 1.20940 1.03506 0.86768 0.95288 1.98375 1.87644 1.20186 1.98363 1.21076 0.99667 0.95491 0.96175 1.20969 0.98629 0.93656 0.98488 1.45184 1.16367 1.62109 1.16602 1.16003 0.81823 0.78400 0.83765 1.90892 1.51886 1.65253 1.39046 1.45540 1.19659 1.60152 1.14016 1.21549 0.80173 0.95771 1.00604 1.19307 0.97753 0.95911 0.89393 1.21020 0.99796 1.36012 0.99139 0.92313 1.24985 0.97432 0.96084 0.95736 1.69945 1.35560 1.44059 1.03808 0.86582 0.84216 0.79670 0.77128 1.20109 1.21264 1.20106 0.92236 0.91825 0.94088 0.92059 0.91564 0.90129 0.89177 0.85118 0.85072 0.84886 0.85313 0.77682 0.77613 0.92922 0.92909 0.96060 0.96058 0.92835 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.85 8.51 37.16 0.32 -1.53 16 2 C -0.13 -1.27 5.61 -26.74 -0.15 -1.42 16 3 C 0.17 1.69 2.24 -67.93 -0.15 1.54 16 4 H 0.09 1.11 7.58 -51.93 -0.39 0.72 16 5 C -0.09 -0.62 4.89 -27.88 -0.14 -0.76 16 6 C -0.07 -0.62 4.95 -104.62 -0.52 -1.14 16 7 C -0.10 -0.91 9.70 -39.59 -0.38 -1.29 16 8 C -0.11 -1.02 9.83 -39.55 -0.39 -1.41 16 9 C -0.04 -0.40 6.32 -39.49 -0.25 -0.65 16 10 Cl -0.07 -0.77 28.96 -51.86 -1.50 -2.27 16 11 C -0.11 -1.04 9.83 -39.54 -0.39 -1.43 16 12 C -0.10 -0.88 9.09 -39.59 -0.36 -1.24 16 13 N -0.75 -8.68 4.48 -58.68 -0.26 -8.94 16 14 C 0.70 11.62 7.13 -86.91 -0.62 11.00 16 15 O -0.59 -11.93 13.48 5.29 0.07 -11.86 16 16 N -0.74 -12.86 5.56 -65.22 -0.36 -13.22 16 17 C 0.14 3.05 5.61 -4.04 -0.02 3.03 16 18 C 0.01 0.35 5.09 -27.88 -0.14 0.20 16 19 C -0.52 -14.55 9.11 -34.44 -0.31 -14.86 16 20 H 0.06 1.61 7.74 -52.48 -0.41 1.20 16 21 C 0.06 1.67 5.46 -17.82 -0.10 1.58 16 22 N -0.89 -26.21 13.29 55.43 0.74 -25.48 16 23 Si 0.90 21.51 29.54 -169.99 -5.02 16.49 16 24 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 25 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 26 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 27 H 0.06 0.85 7.84 -51.93 -0.41 0.44 16 28 H 0.06 1.01 5.64 -51.93 -0.29 0.71 16 29 H 0.04 0.47 8.14 -51.93 -0.42 0.05 16 30 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 31 H 0.07 0.51 8.14 -51.93 -0.42 0.08 16 32 H 0.08 0.45 8.09 -51.93 -0.42 0.03 16 33 H 0.09 0.48 8.08 -51.93 -0.42 0.06 16 34 H 0.13 0.87 8.06 -52.49 -0.42 0.45 16 35 H 0.13 1.04 8.06 -52.49 -0.42 0.62 16 36 H 0.13 1.18 8.06 -52.49 -0.42 0.76 16 37 H 0.13 0.89 7.57 -52.49 -0.40 0.49 16 38 H 0.39 3.57 7.84 -40.82 -0.32 3.25 16 39 H 0.39 5.88 8.49 -40.82 -0.35 5.53 16 40 H 0.05 1.20 8.14 -51.93 -0.42 0.77 16 41 H 0.05 1.18 8.14 -51.93 -0.42 0.76 16 42 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 43 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 44 H 0.26 7.27 8.31 -40.82 -0.34 6.93 16 LS Contribution 378.36 15.07 5.70 5.70 Total: -1.00 -32.35 378.36 -11.01 -43.36 By element: Atomic # 1 Polarization: 11.37 SS G_CDS: -6.77 Total: 4.60 kcal Atomic # 6 Polarization: -4.78 SS G_CDS: -3.61 Total: -8.38 kcal Atomic # 7 Polarization: -47.75 SS G_CDS: 0.11 Total: -47.64 kcal Atomic # 8 Polarization: -11.93 SS G_CDS: 0.07 Total: -11.86 kcal Atomic # 14 Polarization: 21.51 SS G_CDS: -5.02 Total: 16.49 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.50 Total: -2.27 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -32.35 -11.01 -43.36 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273624257.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.752 kcal (2) G-P(sol) polarization free energy of solvation -32.350 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.598 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.012 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.362 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds