Wall clock time and date at job start Tue Mar 31 2020 14:18:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53001 * 109.47249 * 2 1 4 4 H 1.09001 * 109.47215 * 305.00149 * 3 2 1 5 5 N 1.46496 * 109.46861 * 65.00042 * 3 2 1 6 6 C 1.34772 * 120.00222 * 275.00027 * 5 3 2 7 7 O 1.21283 * 119.99912 * 359.97438 * 6 5 3 8 8 C 1.50700 * 119.99971 * 180.02562 * 6 5 3 9 9 H 1.09001 * 109.46817 * 319.98961 * 8 6 5 10 10 N 1.46910 * 109.46728 * 199.99907 * 8 6 5 11 11 C 1.52992 * 109.47798 * 79.99728 * 8 6 5 12 12 C 1.52997 * 109.47482 * 185.00026 * 11 8 6 13 13 C 1.50701 * 109.47212 * 179.97438 * 12 11 8 14 14 H 1.07998 * 120.00129 * 0.02562 * 13 12 11 15 15 C 1.37880 * 119.99861 * 179.97438 * 13 12 11 16 16 N 1.31510 * 119.99913 * 0.02562 * 15 13 12 17 17 Si 1.86797 * 119.99734 * 180.02562 * 15 13 12 18 18 H 1.48502 * 109.47432 * 0.02562 * 17 15 13 19 19 H 1.48506 * 109.46890 * 120.00210 * 17 15 13 20 20 H 1.48501 * 109.47062 * 240.00257 * 17 15 13 21 21 C 1.50699 * 109.47057 * 185.00435 * 3 2 1 22 22 C 1.38248 * 119.98449 * 279.72632 * 21 3 2 23 23 C 1.38216 * 120.00938 * 179.72872 * 22 21 3 24 24 C 1.38344 * 119.98749 * 0.54615 * 23 22 21 25 25 Cl 1.73604 * 120.01178 * 179.70455 * 24 23 22 26 26 C 1.38352 * 119.97753 * 359.72843 * 24 23 22 27 27 C 1.38217 * 119.98143 * 359.97438 * 26 24 23 28 28 H 1.09001 * 109.46823 * 299.99932 * 1 2 3 29 29 H 1.09007 * 109.47242 * 59.99555 * 1 2 3 30 30 H 1.09003 * 109.47616 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.46823 * 240.00068 * 2 1 3 32 32 H 1.08997 * 109.47200 * 120.00371 * 2 1 3 33 33 H 0.97003 * 119.99378 * 95.00171 * 5 3 2 34 34 H 1.00892 * 110.99957 * 299.99600 * 10 8 6 35 35 H 1.00899 * 110.99816 * 63.94833 * 10 8 6 36 36 H 1.09002 * 109.47103 * 64.99779 * 11 8 6 37 37 H 1.08998 * 109.46862 * 305.00591 * 11 8 6 38 38 H 1.09002 * 109.47153 * 59.99783 * 12 11 8 39 39 H 1.09001 * 109.46832 * 299.99974 * 12 11 8 40 40 H 0.97002 * 119.99768 * 179.97438 * 16 15 13 41 41 H 1.08003 * 119.99227 * 359.97438 * 22 21 3 42 42 H 1.07997 * 120.00082 * 180.27241 * 23 22 21 43 43 H 1.07995 * 120.01119 * 179.97438 * 26 24 23 44 44 H 1.08005 * 119.98863 * 180.02562 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9816 -0.8418 5 7 1.6524 2.0974 1.2518 6 6 0.4352 2.6643 1.3670 7 8 -0.3392 2.6327 0.4341 8 6 0.0368 3.3385 2.6546 9 1 0.3965 2.7505 3.4990 10 7 -1.4271 3.4438 2.7195 11 6 0.6517 4.7384 2.7089 12 6 0.3516 5.3749 4.0674 13 6 0.9578 6.7535 4.1212 14 1 1.5023 7.1375 3.2712 15 6 0.8165 7.5251 5.2551 16 7 0.1530 7.0577 6.2899 17 14 1.5673 9.2342 5.3214 18 1 2.2565 9.5223 4.0379 19 1 0.4952 10.2376 5.5431 20 1 2.5467 9.3017 6.4356 21 6 3.5419 1.4443 -0.1239 22 6 4.3273 1.2085 0.9891 23 6 5.7047 1.2045 0.8749 24 6 6.2976 1.4475 -0.3512 25 17 8.0278 1.4502 -0.4938 26 6 5.5112 1.6890 -1.4636 27 6 4.1338 1.6867 -1.3494 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 1.8932 -0.5138 -0.8900 32 1 1.8933 -0.5139 0.8899 33 1 2.2720 2.1230 1.9977 34 1 -1.7853 3.9847 1.9468 35 1 -1.8543 2.5302 2.7502 36 1 0.2246 5.3538 1.9170 37 1 1.7306 4.6668 2.5715 38 1 0.7786 4.7595 4.8593 39 1 -0.7274 5.4464 4.2047 40 1 0.0539 7.6004 7.0878 41 1 3.8643 1.0236 1.9472 42 1 6.3180 1.0159 1.7436 43 1 5.9735 1.8792 -2.4209 44 1 3.5198 1.8748 -2.2178 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000424072087.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:18:26 Heat of formation + Delta-G solvation = -41.012946 kcal Electronic energy + Delta-G solvation = -24855.037534 eV Core-core repulsion = 21218.021988 eV Total energy + Delta-G solvation = -3637.015546 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -40.56815 -39.37872 -37.02436 -36.01113 -35.04977 -32.83015 -32.39753 -31.43316 -31.09903 -30.09828 -26.98790 -25.82378 -23.70572 -23.27344 -22.49709 -21.04767 -20.41196 -19.84545 -17.87649 -17.02195 -16.61669 -16.21340 -15.80449 -15.47803 -15.23724 -15.05257 -14.53065 -14.24536 -14.18222 -13.89315 -13.84664 -13.46123 -13.19776 -12.81254 -12.65959 -12.32873 -12.03620 -11.91685 -11.82429 -11.59821 -11.49755 -11.25806 -11.16218 -11.00654 -10.91636 -10.66699 -10.52397 -10.10947 -9.80761 -9.41931 -9.38687 -9.16034 -8.98912 -8.90745 -8.35779 -8.21123 -5.94565 -3.96558 0.72226 0.91444 1.79668 2.74691 3.10623 3.33533 3.33920 3.41261 3.45240 4.20963 4.38510 4.49727 4.50661 4.81400 4.85228 4.88245 4.94751 5.02886 5.06751 5.23027 5.32749 5.41142 5.46193 5.50913 5.56157 5.66243 5.78622 5.82585 5.83099 5.85399 5.95484 6.09288 6.27921 6.38858 6.41336 6.47203 6.64323 7.07701 7.34850 7.56061 7.75471 7.78377 7.95349 8.12182 8.28953 8.47885 9.11659 9.66780 11.16336 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.009453 B = 0.003217 C = 0.002512 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2961.159424 B = 8702.311503 C =11145.527733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.126 4.126 3 C 0.183 3.817 4 H 0.097 0.903 5 N -0.725 5.725 6 C 0.486 3.514 7 O -0.546 6.546 8 C 0.078 3.922 9 H 0.096 0.904 10 N -0.806 5.806 11 C -0.095 4.095 12 C 0.031 3.969 13 C -0.522 4.522 14 H 0.052 0.948 15 C 0.058 3.942 16 N -0.892 5.892 17 Si 0.888 3.112 18 H -0.274 1.274 19 H -0.284 1.284 20 H -0.285 1.285 21 C -0.084 4.084 22 C -0.099 4.099 23 C -0.104 4.104 24 C -0.035 4.035 25 Cl -0.072 7.072 26 C -0.107 4.107 27 C -0.096 4.096 28 H 0.058 0.942 29 H 0.060 0.940 30 H 0.046 0.954 31 H 0.069 0.931 32 H 0.065 0.935 33 H 0.401 0.599 34 H 0.348 0.652 35 H 0.333 0.667 36 H 0.053 0.947 37 H 0.052 0.948 38 H 0.012 0.988 39 H 0.035 0.965 40 H 0.259 0.741 41 H 0.133 0.867 42 H 0.136 0.864 43 H 0.135 0.865 44 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.727 -17.571 -14.455 24.745 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.165 4.165 3 C 0.078 3.922 4 H 0.115 0.885 5 N -0.379 5.379 6 C 0.272 3.728 7 O -0.424 6.424 8 C -0.038 4.038 9 H 0.114 0.886 10 N -0.334 5.334 11 C -0.133 4.133 12 C -0.006 4.006 13 C -0.560 4.560 14 H 0.070 0.930 15 C -0.143 4.143 16 N -0.532 5.532 17 Si 0.716 3.284 18 H -0.199 1.199 19 H -0.210 1.210 20 H -0.211 1.211 21 C -0.085 4.085 22 C -0.118 4.118 23 C -0.123 4.123 24 C -0.062 4.062 25 Cl -0.043 7.043 26 C -0.126 4.126 27 C -0.114 4.114 28 H 0.077 0.923 29 H 0.079 0.921 30 H 0.065 0.935 31 H 0.088 0.912 32 H 0.083 0.917 33 H 0.237 0.763 34 H 0.162 0.838 35 H 0.145 0.855 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.031 0.969 39 H 0.053 0.947 40 H 0.068 0.932 41 H 0.151 0.849 42 H 0.154 0.846 43 H 0.152 0.848 44 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 9.352 -17.145 -14.259 24.181 hybrid contribution 1.053 0.454 -0.478 1.242 sum 10.405 -16.691 -14.737 24.577 Atomic orbital electron populations 1.21800 0.94455 1.00577 1.03275 1.21933 0.97181 0.95040 1.02351 1.19866 0.89096 0.94108 0.89166 0.88520 1.46316 1.17524 1.58157 1.15890 1.22699 0.80995 0.76969 0.92134 1.90654 1.51452 1.59229 1.41019 1.21842 0.90534 0.99288 0.92100 0.88572 1.58991 1.02598 1.20358 1.51468 1.21648 0.98112 0.90699 1.02850 1.19016 0.98387 0.94203 0.88976 1.21316 1.34059 1.00686 0.99939 0.92958 1.24989 0.95440 0.98061 0.95847 1.69983 1.41515 1.37122 1.04545 0.86606 0.79016 0.84876 0.77896 1.19856 1.21045 1.21096 1.20081 0.95302 0.99178 0.93906 1.20937 0.92770 0.99358 0.98719 1.21063 0.94994 0.99860 0.96361 1.20972 0.84688 1.04887 0.95641 1.98379 1.10666 1.97001 1.98280 1.21046 0.93370 1.00190 0.97960 1.20980 0.93960 0.99014 0.97463 0.92285 0.92141 0.93526 0.91189 0.91676 0.76312 0.83797 0.85510 0.92861 0.92898 0.96921 0.94671 0.93163 0.84935 0.84613 0.84759 0.84812 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.55 8.52 37.16 0.32 -1.23 16 2 C -0.13 -1.15 5.59 -26.73 -0.15 -1.30 16 3 C 0.18 1.84 2.46 -69.08 -0.17 1.67 16 4 H 0.10 1.13 7.44 -51.93 -0.39 0.74 16 5 N -0.73 -8.24 4.98 -54.93 -0.27 -8.51 16 6 C 0.49 6.94 5.63 -10.99 -0.06 6.88 16 7 O -0.55 -8.91 13.39 5.55 0.07 -8.83 16 8 C 0.08 1.24 3.15 -68.86 -0.22 1.03 16 9 H 0.10 1.44 8.14 -51.93 -0.42 1.02 16 10 N -0.81 -13.01 8.44 -5.65 -0.05 -13.06 16 11 C -0.09 -1.87 4.78 -26.74 -0.13 -1.99 16 12 C 0.03 0.79 4.86 -27.88 -0.14 0.65 16 13 C -0.52 -14.66 9.11 -34.44 -0.31 -14.98 16 14 H 0.05 1.44 7.74 -52.49 -0.41 1.04 16 15 C 0.06 1.65 5.46 -17.82 -0.10 1.56 16 16 N -0.89 -26.78 13.29 55.43 0.74 -26.04 16 17 Si 0.89 21.71 29.54 -169.99 -5.02 16.68 16 18 H -0.27 -6.57 7.11 56.52 0.40 -6.17 16 19 H -0.28 -6.91 7.11 56.52 0.40 -6.50 16 20 H -0.28 -6.87 7.11 56.52 0.40 -6.47 16 21 C -0.08 -0.77 4.96 -104.62 -0.52 -1.28 16 22 C -0.10 -0.85 9.06 -39.59 -0.36 -1.21 16 23 C -0.10 -0.90 9.83 -39.55 -0.39 -1.29 16 24 C -0.04 -0.32 6.32 -39.50 -0.25 -0.57 16 25 Cl -0.07 -0.64 28.96 -51.86 -1.50 -2.14 16 26 C -0.11 -0.90 9.83 -39.55 -0.39 -1.29 16 27 C -0.10 -0.81 9.67 -39.59 -0.38 -1.19 16 28 H 0.06 0.74 5.65 -51.93 -0.29 0.44 16 29 H 0.06 0.72 7.85 -51.92 -0.41 0.31 16 30 H 0.05 0.44 8.14 -51.93 -0.42 0.02 16 31 H 0.07 0.56 8.14 -51.93 -0.42 0.14 16 32 H 0.06 0.56 8.14 -51.93 -0.42 0.14 16 33 H 0.40 4.00 6.85 -40.82 -0.28 3.72 16 34 H 0.35 5.72 8.58 -39.30 -0.34 5.38 16 35 H 0.33 4.63 9.06 -39.29 -0.36 4.27 16 36 H 0.05 1.10 8.14 -51.93 -0.42 0.68 16 37 H 0.05 0.99 8.14 -51.93 -0.42 0.57 16 38 H 0.01 0.33 8.14 -51.93 -0.42 -0.09 16 39 H 0.03 0.96 7.75 -51.93 -0.40 0.56 16 40 H 0.26 7.32 8.31 -40.82 -0.34 6.99 16 41 H 0.13 0.94 6.90 -52.48 -0.36 0.58 16 42 H 0.14 0.99 8.06 -52.49 -0.42 0.57 16 43 H 0.13 0.91 8.06 -52.49 -0.42 0.48 16 44 H 0.13 0.93 8.04 -52.48 -0.42 0.50 16 LS Contribution 376.40 15.07 5.67 5.67 Total: -1.00 -31.67 376.40 -10.20 -41.87 By element: Atomic # 1 Polarization: 15.50 SS G_CDS: -6.59 Total: 8.91 kcal Atomic # 6 Polarization: -11.31 SS G_CDS: -3.24 Total: -14.55 kcal Atomic # 7 Polarization: -48.03 SS G_CDS: 0.42 Total: -47.61 kcal Atomic # 8 Polarization: -8.91 SS G_CDS: 0.07 Total: -8.83 kcal Atomic # 14 Polarization: 21.71 SS G_CDS: -5.02 Total: 16.68 kcal Atomic # 17 Polarization: -0.64 SS G_CDS: -1.50 Total: -2.14 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -31.67 -10.20 -41.87 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000424072087.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.856 kcal (2) G-P(sol) polarization free energy of solvation -31.673 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.869 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.013 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds