Wall clock time and date at job start Tue Mar 31 2020 14:21:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53000 * 109.46915 * 2 1 4 4 H 1.08997 * 109.47211 * 304.99377 * 3 2 1 5 5 C 1.53001 * 109.47550 * 64.99526 * 3 2 1 6 6 C 1.53004 * 109.46928 * 184.99770 * 3 2 1 7 7 H 1.08997 * 109.46853 * 299.99826 * 6 3 2 8 8 C 1.52999 * 109.47254 * 59.99934 * 6 3 2 9 9 N 1.46508 * 109.46975 * 179.97438 * 6 3 2 10 10 C 1.34778 * 119.99625 * 154.99602 * 9 6 3 11 11 O 1.21575 * 120.00345 * 0.02562 * 10 9 6 12 12 N 1.34773 * 119.99302 * 179.97438 * 10 9 6 13 13 C 1.39277 * 119.99731 * 185.55342 * 12 10 9 14 14 C 1.39469 * 119.83668 * 21.33816 * 13 12 10 15 15 C 1.36374 * 120.17531 * 179.75986 * 14 13 12 16 16 C 1.40896 * 119.85102 * 0.53704 * 15 14 13 17 17 C 1.41156 * 120.15759 * 179.73878 * 16 15 14 18 18 H 1.07999 * 119.99850 * 151.09417 * 17 16 15 19 19 C 1.39884 * 119.99960 * 331.09635 * 17 16 15 20 20 N 1.30886 * 119.99875 * 167.25146 * 19 17 16 21 21 Si 1.86796 * 120.00173 * 347.25191 * 19 17 16 22 22 H 1.48500 * 109.47375 * 95.27508 * 21 19 17 23 23 H 1.48507 * 109.46946 * 215.27476 * 21 19 17 24 24 H 1.48503 * 109.47310 * 335.26923 * 21 19 17 25 25 C 1.40837 * 119.68172 * 359.71672 * 16 15 14 26 26 C 1.36476 * 119.82124 * 0.02562 * 25 16 15 27 27 Cl 1.73598 * 119.92827 * 180.02562 * 26 25 16 28 28 H 1.09000 * 109.46769 * 179.97438 * 1 2 3 29 29 H 1.08991 * 109.47374 * 300.00127 * 1 2 3 30 30 H 1.08998 * 109.46675 * 60.00773 * 1 2 3 31 31 H 1.08991 * 109.47374 * 239.99873 * 2 1 3 32 32 H 1.08998 * 109.46675 * 119.99227 * 2 1 3 33 33 H 1.08998 * 109.47226 * 180.02562 * 5 3 2 34 34 H 1.08998 * 109.46907 * 300.00089 * 5 3 2 35 35 H 1.09002 * 109.46826 * 60.00156 * 5 3 2 36 36 H 1.09002 * 109.47119 * 59.99709 * 8 6 3 37 37 H 1.08998 * 109.46957 * 179.97438 * 8 6 3 38 38 H 1.08998 * 109.46883 * 299.99726 * 8 6 3 39 39 H 0.96999 * 119.99550 * 334.99936 * 9 6 3 40 40 H 0.97003 * 120.00556 * 5.28546 * 12 10 9 41 41 H 1.07993 * 119.91179 * 0.02562 * 14 13 12 42 42 H 1.07997 * 120.07824 * 180.25639 * 15 14 13 43 43 H 0.96995 * 119.99947 * 179.97438 * 20 19 17 44 44 H 1.07997 * 120.08948 * 180.02562 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 -0.8418 5 6 1.6351 2.1267 1.3073 6 6 3.5648 1.4443 -0.1257 7 1 3.9994 0.9054 0.7162 8 6 3.9697 0.7603 -1.4330 9 7 4.0531 2.8257 -0.1263 10 6 5.3118 3.0956 0.2729 11 8 6.0421 2.1929 0.6331 12 7 5.7610 4.3662 0.2719 13 6 7.0944 4.6336 0.5728 14 6 8.0513 3.6280 0.4381 15 6 9.3595 3.8836 0.7261 16 6 9.7422 5.1643 1.1718 17 6 11.0937 5.4344 1.4770 18 1 11.4835 6.4350 1.3626 19 6 11.9279 4.4060 1.9277 20 7 13.2235 4.5866 1.9727 21 14 11.1930 2.7750 2.4653 22 1 11.2284 1.8179 1.3304 23 1 11.9800 2.2273 3.5994 24 1 9.7865 2.9830 2.8938 25 6 8.7700 6.1737 1.3107 26 6 7.4654 5.9050 1.0137 27 17 6.2648 7.1474 1.1833 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8899 30 1 -0.3632 0.5137 -0.8901 31 1 1.8934 -0.5138 -0.8899 32 1 1.8933 -0.5137 0.8901 33 1 1.9980 3.1545 1.3070 34 1 0.5488 2.1253 1.3967 35 1 2.0698 1.5877 2.1491 36 1 3.5350 1.2993 -2.2748 37 1 5.0559 0.7620 -1.5227 38 1 3.6064 -0.2674 -1.4329 39 1 3.4704 3.5458 -0.4140 40 1 5.1568 5.0942 0.0577 41 1 7.7562 2.6455 0.1006 42 1 10.0999 3.1049 0.6173 43 1 13.8019 3.8736 2.2856 44 1 9.0561 7.1578 1.6513 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455703211.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:21:02 Heat of formation + Delta-G solvation = -31.613526 kcal Electronic energy + Delta-G solvation = -25107.830342 eV Core-core repulsion = 21471.222386 eV Total energy + Delta-G solvation = -3636.607956 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -40.30792 -38.46715 -37.35331 -35.81184 -34.53980 -34.00431 -33.14638 -30.68484 -29.79955 -29.58371 -29.17698 -25.09010 -24.70272 -22.89377 -22.02714 -21.19109 -20.48439 -19.95573 -18.10345 -17.57726 -17.14870 -15.81176 -15.44133 -15.27418 -14.89696 -14.58519 -14.38882 -14.25380 -13.81375 -13.66187 -13.45518 -12.93700 -12.88393 -12.71763 -12.53864 -12.38706 -12.34192 -12.02729 -11.83376 -11.58942 -11.55411 -11.05961 -11.00935 -10.89144 -10.80262 -10.66556 -10.65479 -10.46189 -10.22233 -9.76820 -9.69459 -9.20353 -9.03125 -8.95761 -7.76851 -7.18460 -6.99417 -4.50365 2.28450 2.50547 2.82770 2.97216 3.12014 3.23212 3.34944 3.55055 3.97465 4.40508 4.42068 4.42942 4.58053 4.69907 4.99036 5.15187 5.20524 5.29661 5.30693 5.32327 5.45441 5.60592 5.67848 5.70309 5.72007 5.77928 5.84192 5.93759 6.06774 6.09794 6.21107 6.23563 6.43225 6.55808 6.60245 6.78183 6.91403 7.01046 7.21765 7.44663 7.49764 7.75150 7.87649 8.25060 8.30706 8.48834 8.69947 8.92245 10.01826 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.016113 B = 0.003293 C = 0.002861 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1737.314371 B = 8501.196963 C = 9785.038530 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.120 4.120 3 C -0.098 4.098 4 H 0.073 0.927 5 C -0.148 4.148 6 C 0.165 3.835 7 H 0.088 0.912 8 C -0.166 4.166 9 N -0.744 5.744 10 C 0.699 3.301 11 O -0.576 6.576 12 N -0.665 5.665 13 C 0.029 3.971 14 C -0.069 4.069 15 C -0.220 4.220 16 C 0.089 3.911 17 C -0.433 4.433 18 H 0.094 0.906 19 C 0.082 3.918 20 N -0.806 5.806 21 Si 0.911 3.089 22 H -0.269 1.269 23 H -0.292 1.292 24 H -0.238 1.238 25 C -0.188 4.188 26 C -0.007 4.007 27 Cl -0.115 7.115 28 H 0.053 0.947 29 H 0.056 0.944 30 H 0.053 0.947 31 H 0.069 0.931 32 H 0.065 0.935 33 H 0.056 0.944 34 H 0.056 0.944 35 H 0.056 0.944 36 H 0.053 0.947 37 H 0.063 0.937 38 H 0.065 0.935 39 H 0.391 0.609 40 H 0.396 0.604 41 H 0.138 0.862 42 H 0.105 0.895 43 H 0.287 0.713 44 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.312 -5.549 -4.411 22.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.158 4.158 3 C -0.117 4.117 4 H 0.092 0.908 5 C -0.205 4.205 6 C 0.060 3.940 7 H 0.106 0.894 8 C -0.225 4.225 9 N -0.400 5.400 10 C 0.399 3.601 11 O -0.454 6.454 12 N -0.311 5.311 13 C -0.065 4.065 14 C -0.089 4.089 15 C -0.240 4.240 16 C 0.085 3.915 17 C -0.461 4.461 18 H 0.112 0.888 19 C -0.138 4.138 20 N -0.430 5.430 21 Si 0.739 3.261 22 H -0.196 1.196 23 H -0.220 1.220 24 H -0.161 1.161 25 C -0.209 4.209 26 C -0.036 4.036 27 Cl -0.087 7.087 28 H 0.072 0.928 29 H 0.075 0.925 30 H 0.072 0.928 31 H 0.087 0.913 32 H 0.084 0.916 33 H 0.075 0.925 34 H 0.075 0.925 35 H 0.075 0.925 36 H 0.072 0.928 37 H 0.082 0.918 38 H 0.084 0.916 39 H 0.225 0.775 40 H 0.230 0.770 41 H 0.156 0.844 42 H 0.123 0.877 43 H 0.098 0.902 44 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -20.472 -6.323 -4.020 21.800 hybrid contribution -0.762 0.216 -0.003 0.792 sum -21.234 -6.107 -4.022 22.458 Atomic orbital electron populations 1.21812 0.95747 1.01568 1.01876 1.21610 0.95913 0.95622 1.02649 1.21449 0.94227 0.97135 0.98922 0.90823 1.21868 1.01012 1.00734 0.96933 1.20791 0.92644 0.81632 0.98938 0.89394 1.22274 1.02663 1.00354 0.97194 1.45195 1.13212 1.09334 1.72215 1.15904 0.81907 0.83331 0.78909 1.90841 1.55427 1.45143 1.53990 1.42064 1.10329 1.06582 1.72098 1.16624 0.82337 0.93650 1.13912 1.20768 0.91409 0.98374 0.98385 1.20772 0.95431 0.98158 1.09600 1.17658 0.93103 0.90661 0.90072 1.19450 0.91852 0.98085 1.36729 0.88845 1.26192 0.94331 1.00605 0.92652 1.69668 1.04360 1.35165 1.33772 0.86318 0.81329 0.80229 0.78268 1.19587 1.21977 1.16093 1.20481 0.89670 1.00910 1.09825 1.20159 0.89804 0.87458 1.06156 1.98261 1.58661 1.55025 1.96772 0.92803 0.92479 0.92828 0.91269 0.91647 0.92533 0.92453 0.92491 0.92752 0.91790 0.91598 0.77516 0.76965 0.84440 0.87700 0.90241 0.86626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.91 9.67 37.16 0.36 -0.55 16 2 C -0.12 -0.83 5.19 -26.73 -0.14 -0.97 16 3 C -0.10 -0.76 2.02 -90.62 -0.18 -0.94 16 4 H 0.07 0.51 8.14 -51.93 -0.42 0.09 16 5 C -0.15 -1.19 8.79 37.16 0.33 -0.86 16 6 C 0.17 1.75 2.16 -67.92 -0.15 1.60 16 7 H 0.09 1.14 7.58 -51.93 -0.39 0.75 16 8 C -0.17 -1.69 9.14 37.16 0.34 -1.35 16 9 N -0.74 -8.77 4.39 -58.67 -0.26 -9.03 16 10 C 0.70 11.71 8.35 -86.92 -0.73 10.98 16 11 O -0.58 -11.95 12.94 5.30 0.07 -11.88 16 12 N -0.66 -11.30 5.21 -14.07 -0.07 -11.37 16 13 C 0.03 0.61 6.50 -83.52 -0.54 0.07 16 14 C -0.07 -1.60 8.68 -39.79 -0.35 -1.94 16 15 C -0.22 -5.38 6.84 -39.25 -0.27 -5.65 16 16 C 0.09 2.23 5.19 -106.80 -0.55 1.67 16 17 C -0.43 -11.47 9.60 -37.86 -0.36 -11.84 16 18 H 0.09 2.56 8.06 -52.49 -0.42 2.14 16 19 C 0.08 2.12 5.47 -17.34 -0.09 2.03 16 20 N -0.81 -21.25 13.93 55.54 0.77 -20.48 16 21 Si 0.91 21.21 24.36 -169.99 -4.14 17.07 16 22 H -0.27 -6.13 6.77 56.52 0.38 -5.75 16 23 H -0.29 -6.55 7.11 56.52 0.40 -6.15 16 24 H -0.24 -5.79 6.45 56.52 0.36 -5.43 16 25 C -0.19 -4.30 9.50 -39.24 -0.37 -4.67 16 26 C -0.01 -0.15 6.30 -39.72 -0.25 -0.40 16 27 Cl -0.12 -1.95 27.70 -51.86 -1.44 -3.39 16 28 H 0.05 0.30 8.14 -51.93 -0.42 -0.13 16 29 H 0.06 0.34 6.56 -51.93 -0.34 0.00 16 30 H 0.05 0.30 8.14 -51.93 -0.42 -0.12 16 31 H 0.07 0.46 6.17 -51.93 -0.32 0.14 16 32 H 0.06 0.48 8.14 -51.93 -0.42 0.06 16 33 H 0.06 0.48 7.45 -51.93 -0.39 0.09 16 34 H 0.06 0.39 6.56 -51.93 -0.34 0.05 16 35 H 0.06 0.51 8.14 -51.93 -0.42 0.09 16 36 H 0.05 0.49 8.14 -51.93 -0.42 0.07 16 37 H 0.06 0.83 8.14 -51.93 -0.42 0.40 16 38 H 0.07 0.56 6.32 -51.93 -0.33 0.23 16 39 H 0.39 3.54 8.41 -40.82 -0.34 3.20 16 40 H 0.40 5.58 7.66 -40.82 -0.31 5.27 16 41 H 0.14 3.19 5.50 -52.49 -0.29 2.90 16 42 H 0.11 2.57 4.19 -52.49 -0.22 2.35 16 43 H 0.29 6.88 8.30 -40.82 -0.34 6.54 16 44 H 0.12 2.51 8.06 -52.49 -0.42 2.09 16 LS Contribution 360.06 15.07 5.43 5.43 Total: -1.00 -28.73 360.06 -8.87 -37.60 By element: Atomic # 1 Polarization: 15.15 SS G_CDS: -6.27 Total: 8.88 kcal Atomic # 6 Polarization: -9.86 SS G_CDS: -2.96 Total: -12.82 kcal Atomic # 7 Polarization: -41.32 SS G_CDS: 0.44 Total: -40.88 kcal Atomic # 8 Polarization: -11.95 SS G_CDS: 0.07 Total: -11.88 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -4.14 Total: 17.07 kcal Atomic # 17 Polarization: -1.95 SS G_CDS: -1.44 Total: -3.39 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -28.73 -8.87 -37.60 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455703211.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.985 kcal (2) G-P(sol) polarization free energy of solvation -28.729 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.743 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.870 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.599 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.614 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds