Wall clock time and date at job start Tue Mar 31 2020 14:21:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52997 * 109.47046 * 2 1 4 4 H 1.09003 * 109.46913 * 183.89907 * 3 2 1 5 5 C 1.50700 * 109.47042 * 303.89968 * 3 2 1 6 6 H 1.08000 * 120.00014 * 115.36533 * 5 3 2 7 7 C 1.37874 * 120.00191 * 295.35546 * 5 3 2 8 8 N 1.31515 * 120.00080 * 354.19681 * 7 5 3 9 9 Si 1.86798 * 119.99986 * 174.19347 * 7 5 3 10 10 H 1.48507 * 109.47056 * 180.02562 * 9 7 5 11 11 H 1.48497 * 109.47560 * 300.00204 * 9 7 5 12 12 H 1.48498 * 109.47052 * 60.00617 * 9 7 5 13 13 N 1.46896 * 109.47135 * 63.90002 * 3 2 1 14 14 C 1.46899 * 110.99857 * 80.80501 * 13 3 2 15 15 C 1.53010 * 109.46868 * 184.83675 * 14 13 3 16 16 C 1.50700 * 109.46889 * 180.02562 * 15 14 13 17 17 O 1.21289 * 120.00072 * 359.97438 * 16 15 14 18 18 N 1.34778 * 120.00229 * 180.02562 * 16 15 14 19 19 C 1.46493 * 120.00149 * 179.97438 * 18 16 15 20 20 C 1.50699 * 109.47131 * 179.97438 * 19 18 16 21 21 C 1.38238 * 120.00893 * 104.99632 * 20 19 18 22 22 C 1.38219 * 120.01437 * 179.97438 * 21 20 19 23 23 C 1.38256 * 120.02806 * 0.05006 * 22 21 20 24 24 C 1.38192 * 120.01303 * 359.97357 * 23 22 21 25 25 C 1.38332 * 120.00587 * 284.73280 * 20 19 18 26 26 Cl 1.73597 * 120.01654 * 359.96610 * 25 20 19 27 27 H 1.09006 * 109.47483 * 64.86845 * 1 2 3 28 28 H 1.08999 * 109.47210 * 184.86683 * 1 2 3 29 29 H 1.09003 * 109.47338 * 304.86327 * 1 2 3 30 30 H 1.09003 * 109.46846 * 240.00223 * 2 1 3 31 31 H 1.08994 * 109.47484 * 120.00578 * 2 1 3 32 32 H 0.97001 * 120.00049 * 354.16763 * 8 7 5 33 33 H 1.00898 * 111.00085 * 316.85394 * 13 3 2 34 34 H 1.09003 * 109.47152 * 304.83386 * 14 13 3 35 35 H 1.08991 * 109.47653 * 64.83747 * 14 13 3 36 36 H 1.08996 * 109.47254 * 299.99487 * 15 14 13 37 37 H 1.09001 * 109.47023 * 60.00183 * 15 14 13 38 38 H 0.97002 * 119.99128 * 0.02562 * 18 16 15 39 39 H 1.09003 * 109.47297 * 299.99757 * 19 18 16 40 40 H 1.09001 * 109.47063 * 60.00343 * 19 18 16 41 41 H 1.08005 * 119.99050 * 0.02562 * 21 20 19 42 42 H 1.08005 * 119.98601 * 180.02562 * 22 21 20 43 43 H 1.08004 * 119.99494 * 179.97438 * 23 22 21 44 44 H 1.08008 * 120.00600 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 3.1277 1.4432 -0.0699 5 6 1.4602 2.1802 -1.1793 6 1 0.7873 3.0097 -1.0197 7 6 1.7891 1.7964 -2.4621 8 7 2.6948 0.8630 -2.6574 9 14 0.9481 2.6019 -3.9226 10 1 1.4743 2.0162 -5.1817 11 1 -0.5160 2.3672 -3.8422 12 1 1.2171 4.0622 -3.9051 13 7 1.6287 2.1072 1.2437 14 6 2.5284 1.7561 2.3506 15 6 2.0010 2.3678 3.6502 16 6 2.9243 2.0082 4.7856 17 8 3.9071 1.3290 4.5761 18 7 2.6574 2.4403 6.0340 19 6 3.5546 2.0902 7.1378 20 6 3.0353 2.6927 8.4177 21 6 2.4176 1.8904 9.3588 22 6 1.9417 2.4428 10.5330 23 6 2.0822 3.7982 10.7667 24 6 2.6991 4.6014 9.8265 25 6 3.1815 4.0479 8.6536 26 17 3.9640 5.0549 7.4758 27 1 -0.3634 0.4365 -0.9304 28 1 -0.3633 -1.0239 0.0872 29 1 -0.3634 0.5874 0.8432 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8899 32 1 3.1920 0.5047 -1.9055 33 1 0.6711 1.8864 1.4722 34 1 2.5740 0.6717 2.4518 35 1 3.5260 2.1441 2.1451 36 1 1.9554 3.4521 3.5491 37 1 1.0034 1.9797 3.8557 38 1 1.8707 2.9825 6.2016 39 1 3.6006 1.0058 7.2387 40 1 4.5521 2.4786 6.9324 41 1 2.3075 0.8315 9.1768 42 1 1.4595 1.8154 11.2682 43 1 1.7097 4.2294 11.6842 44 1 2.8092 5.6602 10.0094 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000574216917.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:21:35 Heat of formation + Delta-G solvation = -32.912923 kcal Electronic energy + Delta-G solvation = -24166.087791 eV Core-core repulsion = 20529.423488 eV Total energy + Delta-G solvation = -3636.664302 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -40.25795 -39.34592 -36.84240 -36.82620 -35.18154 -33.35897 -31.97919 -31.25748 -31.06165 -29.18659 -26.64858 -25.32182 -23.51206 -23.25287 -22.53196 -21.73756 -20.31022 -19.47378 -17.80183 -17.00177 -16.62288 -16.36701 -16.15019 -15.55070 -15.50886 -14.68924 -14.36412 -14.13287 -13.89394 -13.73362 -13.63887 -13.45511 -13.18514 -13.03691 -12.52419 -12.48909 -12.05545 -11.95469 -11.87176 -11.62716 -11.23227 -11.14003 -11.09551 -11.00757 -10.72871 -10.20044 -10.04661 -9.98200 -9.94428 -9.78138 -9.45045 -9.23424 -9.16313 -8.53629 -8.22760 -7.28110 -6.23457 -3.92995 0.55029 0.68513 1.71504 2.70451 2.90129 3.34733 3.49470 3.51122 3.69749 4.07735 4.22684 4.43798 4.58826 4.70229 4.78857 4.81020 5.05380 5.15623 5.19705 5.31725 5.34378 5.45573 5.47084 5.65603 5.71862 5.81828 5.83589 5.87391 6.15240 6.18204 6.20961 6.24609 6.35066 6.36609 6.54188 6.75091 7.05906 7.12385 7.32275 7.34005 7.39114 7.96553 8.22418 8.32231 8.52176 8.69239 8.98649 9.75133 11.12201 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.024557 B = 0.002120 C = 0.002054 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1139.920484 B =13202.149191 C =13628.013998 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C -0.153 4.153 3 C 0.204 3.796 4 H 0.026 0.974 5 C -0.570 4.570 6 H 0.054 0.946 7 C 0.017 3.983 8 N -0.916 5.916 9 Si 1.065 2.935 10 H -0.285 1.285 11 H -0.289 1.289 12 H -0.289 1.289 13 N -0.679 5.679 14 C 0.073 3.927 15 C -0.137 4.137 16 C 0.518 3.482 17 O -0.536 6.536 18 N -0.730 5.730 19 C 0.159 3.841 20 C -0.098 4.098 21 C -0.089 4.089 22 C -0.117 4.117 23 C -0.102 4.102 24 C -0.113 4.113 25 C -0.024 4.024 26 Cl -0.056 7.056 27 H 0.067 0.933 28 H 0.025 0.975 29 H 0.035 0.965 30 H 0.069 0.931 31 H 0.021 0.979 32 H 0.269 0.731 33 H 0.326 0.674 34 H 0.027 0.973 35 H 0.070 0.930 36 H 0.100 0.900 37 H 0.088 0.912 38 H 0.401 0.599 39 H 0.078 0.922 40 H 0.081 0.919 41 H 0.135 0.865 42 H 0.131 0.869 43 H 0.133 0.867 44 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.910 5.169 29.732 30.318 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.193 4.193 3 C 0.096 3.904 4 H 0.044 0.956 5 C -0.608 4.608 6 H 0.073 0.927 7 C -0.187 4.187 8 N -0.554 5.554 9 Si 0.894 3.106 10 H -0.210 1.210 11 H -0.216 1.216 12 H -0.216 1.216 13 N -0.309 5.309 14 C -0.057 4.057 15 C -0.177 4.177 16 C 0.305 3.695 17 O -0.411 6.411 18 N -0.383 5.383 19 C 0.036 3.964 20 C -0.099 4.099 21 C -0.108 4.108 22 C -0.135 4.135 23 C -0.121 4.121 24 C -0.131 4.131 25 C -0.051 4.051 26 Cl -0.027 7.027 27 H 0.086 0.914 28 H 0.045 0.955 29 H 0.054 0.946 30 H 0.087 0.913 31 H 0.040 0.960 32 H 0.080 0.920 33 H 0.144 0.856 34 H 0.045 0.955 35 H 0.089 0.911 36 H 0.119 0.881 37 H 0.106 0.894 38 H 0.235 0.765 39 H 0.097 0.903 40 H 0.100 0.900 41 H 0.153 0.847 42 H 0.149 0.851 43 H 0.151 0.849 44 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -1.882 5.303 27.637 28.204 hybrid contribution -0.445 -0.495 2.066 2.170 sum -2.327 4.808 29.703 30.179 Atomic orbital electron populations 1.21537 0.96866 0.98155 1.01848 1.22216 0.96012 1.01451 0.99622 1.19299 0.95531 0.88398 0.87168 0.95574 1.21823 1.30375 1.17604 0.91038 0.92741 1.25704 0.96757 0.96025 1.00164 1.70781 1.22420 1.26728 1.35425 0.83602 0.75560 0.75561 0.75867 1.21036 1.21604 1.21565 1.60853 1.04796 1.62509 1.02787 1.21642 0.97894 0.97343 0.88851 1.21677 0.98657 1.03947 0.93430 1.20895 0.86393 0.78878 0.83335 1.90717 1.28803 1.37899 1.83723 1.46012 1.28861 1.56083 1.07338 1.20137 0.94214 0.99935 0.82152 1.19840 1.00739 0.91957 0.97395 1.21136 0.96406 1.00153 0.93100 1.21292 0.99516 0.95363 0.97344 1.21204 0.98110 0.93739 0.99019 1.21120 0.98651 1.00898 0.92453 1.20966 1.00188 0.91432 0.92517 1.98418 1.78865 1.68240 1.57152 0.91381 0.95543 0.94644 0.91281 0.96030 0.91987 0.85614 0.95469 0.91131 0.88128 0.89378 0.76538 0.90329 0.90048 0.84739 0.85100 0.84928 0.84699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.67 9.38 37.16 0.35 -2.32 16 2 C -0.15 -3.61 5.46 -26.73 -0.15 -3.75 16 3 C 0.20 5.16 1.95 -68.87 -0.13 5.03 16 4 H 0.03 0.74 7.31 -51.93 -0.38 0.36 16 5 C -0.57 -15.79 7.42 -34.44 -0.26 -16.04 16 6 H 0.05 1.53 7.82 -52.49 -0.41 1.12 16 7 C 0.02 0.48 5.27 -17.82 -0.09 0.38 16 8 N -0.92 -27.53 12.88 55.43 0.71 -26.82 16 9 Si 1.07 25.32 29.91 -169.99 -5.08 20.24 16 10 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 11 H -0.29 -6.55 7.11 56.52 0.40 -6.15 16 12 H -0.29 -6.65 7.11 56.52 0.40 -6.25 16 13 N -0.68 -14.49 6.25 -107.95 -0.67 -15.17 16 14 C 0.07 1.38 4.79 -3.82 -0.02 1.36 16 15 C -0.14 -1.91 5.91 -27.88 -0.16 -2.08 16 16 C 0.52 7.35 7.83 -10.98 -0.09 7.26 16 17 O -0.54 -9.82 15.98 5.55 0.09 -9.73 16 18 N -0.73 -7.64 5.46 -61.47 -0.34 -7.98 16 19 C 0.16 1.55 5.14 -5.20 -0.03 1.53 16 20 C -0.10 -0.78 5.25 -104.59 -0.55 -1.33 16 21 C -0.09 -0.57 9.67 -39.59 -0.38 -0.95 16 22 C -0.12 -0.61 10.05 -39.58 -0.40 -1.00 16 23 C -0.10 -0.53 10.04 -39.59 -0.40 -0.92 16 24 C -0.11 -0.72 9.83 -39.55 -0.39 -1.11 16 25 C -0.02 -0.19 6.31 -39.49 -0.25 -0.44 16 26 Cl -0.06 -0.52 27.56 -51.86 -1.43 -1.95 16 27 H 0.07 1.57 7.30 -51.93 -0.38 1.19 16 28 H 0.03 0.49 8.14 -51.93 -0.42 0.07 16 29 H 0.03 0.67 6.24 -51.93 -0.32 0.35 16 30 H 0.07 1.80 6.27 -51.93 -0.33 1.47 16 31 H 0.02 0.47 7.04 -51.93 -0.37 0.11 16 32 H 0.27 8.10 6.04 -40.82 -0.25 7.86 16 33 H 0.33 6.45 6.44 -39.29 -0.25 6.20 16 34 H 0.03 0.55 6.96 -51.93 -0.36 0.19 16 35 H 0.07 1.47 8.10 -51.93 -0.42 1.05 16 36 H 0.10 1.31 8.14 -51.93 -0.42 0.89 16 37 H 0.09 1.05 8.14 -51.93 -0.42 0.63 16 38 H 0.40 3.37 8.46 -40.82 -0.35 3.03 16 39 H 0.08 0.77 7.95 -51.93 -0.41 0.35 16 40 H 0.08 0.91 7.57 -51.93 -0.39 0.52 16 41 H 0.13 0.68 8.00 -52.48 -0.42 0.26 16 42 H 0.13 0.40 8.06 -52.48 -0.42 -0.02 16 43 H 0.13 0.38 8.06 -52.48 -0.42 -0.05 16 44 H 0.14 0.68 8.06 -52.48 -0.42 0.25 16 LS Contribution 373.78 15.07 5.63 5.63 Total: -1.00 -32.78 373.78 -10.40 -43.19 By element: Atomic # 1 Polarization: 13.34 SS G_CDS: -6.37 Total: 6.97 kcal Atomic # 6 Polarization: -11.45 SS G_CDS: -2.94 Total: -14.39 kcal Atomic # 7 Polarization: -49.67 SS G_CDS: -0.30 Total: -49.96 kcal Atomic # 8 Polarization: -9.82 SS G_CDS: 0.09 Total: -9.73 kcal Atomic # 14 Polarization: 25.32 SS G_CDS: -5.08 Total: 20.24 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.43 Total: -1.95 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -32.78 -10.40 -43.19 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000574216917.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.273 kcal (2) G-P(sol) polarization free energy of solvation -32.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.512 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.401 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.186 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds