Wall clock time and date at job start Tue Mar 31 2020 14:22:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52998 * 109.47406 * 2 1 4 4 H 1.09000 * 109.47272 * 175.06762 * 3 2 1 5 5 C 1.50695 * 109.47153 * 55.06500 * 3 2 1 6 6 H 1.08002 * 120.00229 * 245.69466 * 5 3 2 7 7 C 1.37880 * 120.00324 * 65.70260 * 5 3 2 8 8 N 1.31512 * 119.99637 * 5.49391 * 7 5 3 9 9 Si 1.86792 * 120.00372 * 185.49615 * 7 5 3 10 10 H 1.48498 * 109.47264 * 179.97438 * 9 7 5 11 11 H 1.48493 * 109.47338 * 299.99830 * 9 7 5 12 12 H 1.48504 * 109.47380 * 59.99968 * 9 7 5 13 13 N 1.46906 * 109.46721 * 295.06600 * 3 2 1 14 14 C 1.46896 * 110.99965 * 279.82691 * 13 3 2 15 15 C 1.50703 * 109.46914 * 185.04187 * 14 13 3 16 16 O 1.21273 * 120.00161 * 359.97438 * 15 14 13 17 17 N 1.34778 * 119.99602 * 180.02562 * 15 14 13 18 18 C 1.46502 * 119.99668 * 180.02562 * 17 15 14 19 19 H 1.09000 * 109.47309 * 34.99300 * 18 17 15 20 20 C 1.53003 * 109.46937 * 274.99264 * 18 17 15 21 21 C 1.50696 * 109.47259 * 154.99717 * 18 17 15 22 22 C 1.38234 * 120.00685 * 24.99435 * 21 18 17 23 23 C 1.38227 * 120.01527 * 180.02562 * 22 21 18 24 24 C 1.38259 * 120.02622 * 0.02562 * 23 22 21 25 25 C 1.38196 * 120.00999 * 359.97438 * 24 23 22 26 26 C 1.38333 * 120.00843 * 204.72445 * 21 18 17 27 27 Cl 1.73599 * 120.01250 * 359.97401 * 26 21 18 28 28 H 1.08995 * 109.46974 * 65.00614 * 1 2 3 29 29 H 1.08998 * 109.47260 * 185.01139 * 1 2 3 30 30 H 1.09006 * 109.47005 * 305.01276 * 1 2 3 31 31 H 1.08994 * 109.46793 * 239.99623 * 2 1 3 32 32 H 1.09001 * 109.46592 * 119.99913 * 2 1 3 33 33 H 0.97007 * 120.00134 * 355.14921 * 8 7 5 34 34 H 1.00901 * 110.99834 * 43.78819 * 13 3 2 35 35 H 1.09000 * 109.47133 * 305.03800 * 14 13 3 36 36 H 1.08998 * 109.46831 * 65.04225 * 14 13 3 37 37 H 0.97003 * 120.00472 * 359.97438 * 17 15 14 38 38 H 1.09005 * 109.46965 * 60.00234 * 20 18 17 39 39 H 1.08998 * 109.47458 * 179.97438 * 20 18 17 40 40 H 1.09000 * 109.47150 * 300.00133 * 20 18 17 41 41 H 1.08003 * 119.99639 * 0.02562 * 22 21 18 42 42 H 1.08000 * 119.98629 * 179.97438 * 23 22 21 43 43 H 1.07995 * 119.99657 * 179.97438 * 24 23 22 44 44 H 1.08007 * 120.00461 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 3.1265 1.4437 0.0884 5 6 1.4405 2.1873 1.1647 6 1 0.7571 3.0049 0.9888 7 6 1.7645 1.8252 2.4551 8 7 2.6775 0.9033 2.6697 9 14 0.9066 2.6439 3.8983 10 1 1.4300 2.0815 5.1691 11 1 1.1622 4.1062 3.8613 12 1 -0.5548 2.3945 3.8120 13 7 1.6501 2.0997 -1.2546 14 6 2.5596 1.7301 -2.3474 15 6 2.2050 2.5158 -3.5835 16 8 1.2849 3.3054 -3.5570 17 7 2.9097 2.3401 -4.7188 18 6 2.5653 3.1042 -5.9204 19 1 2.2292 4.1006 -5.6334 20 6 1.4461 2.3868 -6.6777 21 6 3.7782 3.2194 -6.8073 22 6 4.7828 2.2729 -6.7310 23 6 5.8957 2.3786 -7.5440 24 6 6.0050 3.4313 -8.4337 25 6 5.0013 4.3781 -8.5109 26 6 3.8840 4.2692 -7.7019 27 17 2.6192 5.4540 -7.8038 28 1 -0.3633 0.4342 -0.9314 29 1 -0.3634 -1.0237 0.0898 30 1 -0.3633 0.5897 0.8417 31 1 1.8933 -0.5139 -0.8899 32 1 1.8933 -0.5138 0.8900 33 1 3.0723 0.4282 1.9218 34 1 0.6931 1.8858 -1.4925 35 1 3.5862 1.9535 -2.0569 36 1 2.4643 0.6642 -2.5545 37 1 3.6454 1.7082 -4.7402 38 1 0.5688 2.3035 -6.0362 39 1 1.1895 2.9555 -7.5714 40 1 1.7823 1.3904 -6.9647 41 1 4.6982 1.4506 -6.0359 42 1 6.6804 1.6391 -7.4837 43 1 6.8748 3.5136 -9.0684 44 1 5.0866 5.2002 -9.2062 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000578080185.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:22:09 Heat of formation + Delta-G solvation = -21.875077 kcal Electronic energy + Delta-G solvation = -24809.607616 eV Core-core repulsion = 21173.421950 eV Total energy + Delta-G solvation = -3636.185666 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -40.39694 -39.13772 -36.77674 -36.69376 -35.55652 -32.75834 -31.88829 -31.17742 -30.64578 -29.49570 -27.01606 -24.84222 -23.95659 -23.56704 -23.14696 -21.24787 -20.18373 -19.51308 -18.04259 -17.14445 -16.48726 -16.25102 -15.64877 -15.52812 -15.07927 -14.57154 -14.29284 -14.09264 -13.96254 -13.73420 -13.53501 -13.52481 -13.08320 -12.84671 -12.53882 -12.34102 -12.08854 -11.92086 -11.84829 -11.75615 -11.67722 -11.44117 -11.11093 -10.88092 -10.73349 -10.29949 -10.12258 -10.04597 -9.87198 -9.57847 -9.37595 -9.20023 -8.97114 -8.61916 -8.22371 -7.33970 -6.28337 -3.97614 0.71754 0.80776 1.79505 2.91012 3.08807 3.22818 3.49447 3.50640 3.69226 4.13974 4.33190 4.53692 4.56593 4.85377 4.88526 4.93335 5.09845 5.16171 5.21277 5.26257 5.41672 5.42192 5.53011 5.65483 5.71352 5.76069 5.78443 5.93993 5.97068 6.03019 6.09032 6.12637 6.30557 6.33380 6.47859 6.65474 6.93014 7.00012 7.21872 7.31611 7.50909 7.88779 8.26543 8.38691 8.50351 8.67607 8.94701 9.70281 11.08076 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.020860 B = 0.002468 C = 0.002413 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1341.949822 B =11342.609261 C =11600.744574 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.154 4.154 3 C 0.205 3.795 4 H 0.028 0.972 5 C -0.569 4.569 6 H 0.057 0.943 7 C 0.018 3.982 8 N -0.918 5.918 9 Si 1.067 2.933 10 H -0.285 1.285 11 H -0.288 1.288 12 H -0.288 1.288 13 N -0.659 5.659 14 C 0.041 3.959 15 C 0.515 3.485 16 O -0.517 6.517 17 N -0.737 5.737 18 C 0.180 3.820 19 H 0.105 0.895 20 C -0.156 4.156 21 C -0.077 4.077 22 C -0.105 4.105 23 C -0.109 4.109 24 C -0.111 4.111 25 C -0.106 4.106 26 C -0.029 4.029 27 Cl -0.061 7.061 28 H 0.033 0.967 29 H 0.028 0.972 30 H 0.074 0.926 31 H 0.020 0.980 32 H 0.068 0.932 33 H 0.268 0.732 34 H 0.338 0.662 35 H 0.094 0.906 36 H 0.047 0.953 37 H 0.396 0.604 38 H 0.070 0.930 39 H 0.066 0.934 40 H 0.058 0.942 41 H 0.131 0.869 42 H 0.131 0.869 43 H 0.132 0.868 44 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.212 1.006 -25.080 25.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C -0.194 4.194 3 C 0.097 3.903 4 H 0.045 0.955 5 C -0.608 4.608 6 H 0.075 0.925 7 C -0.185 4.185 8 N -0.556 5.556 9 Si 0.896 3.104 10 H -0.210 1.210 11 H -0.215 1.215 12 H -0.215 1.215 13 N -0.291 5.291 14 C -0.092 4.092 15 C 0.302 3.698 16 O -0.391 6.391 17 N -0.394 5.394 18 C 0.075 3.925 19 H 0.123 0.877 20 C -0.215 4.215 21 C -0.078 4.078 22 C -0.124 4.124 23 C -0.127 4.127 24 C -0.130 4.130 25 C -0.125 4.125 26 C -0.057 4.057 27 Cl -0.032 7.032 28 H 0.052 0.948 29 H 0.047 0.953 30 H 0.093 0.907 31 H 0.039 0.961 32 H 0.087 0.913 33 H 0.080 0.920 34 H 0.158 0.842 35 H 0.112 0.888 36 H 0.065 0.935 37 H 0.232 0.768 38 H 0.089 0.911 39 H 0.085 0.915 40 H 0.077 0.923 41 H 0.149 0.851 42 H 0.149 0.851 43 H 0.150 0.850 44 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 5.695 2.373 -23.225 24.031 hybrid contribution 0.180 -1.298 -2.019 2.407 sum 5.875 1.074 -25.245 25.941 Atomic orbital electron populations 1.21605 0.96656 0.99168 1.01603 1.22290 0.96350 1.01336 0.99410 1.19394 0.95684 0.88383 0.86859 0.95459 1.21815 1.30005 1.18065 0.90914 0.92485 1.25718 0.95772 0.97067 0.99988 1.70826 1.24675 1.24578 1.35488 0.83555 0.75567 0.75658 0.75616 1.21020 1.21466 1.21496 1.60474 1.05016 1.62282 1.01326 1.21807 1.00354 0.96259 0.90799 1.21047 0.81930 0.82931 0.83907 1.90685 1.29049 1.35313 1.84017 1.46255 1.37098 1.45226 1.10777 1.19758 0.91106 0.97939 0.83711 0.87728 1.22133 0.98403 1.00393 1.00522 1.19866 0.96899 0.94288 0.96782 1.20908 0.93432 0.98493 0.99554 1.21258 0.97755 0.98249 0.95422 1.21149 0.98627 0.94223 0.98954 1.21075 0.92425 1.00044 0.98932 1.20751 0.92164 0.92776 0.99959 1.98394 1.51048 1.56413 1.97319 0.94812 0.95291 0.90733 0.96143 0.91331 0.92040 0.84245 0.88837 0.93535 0.76813 0.91133 0.91465 0.92336 0.85125 0.85086 0.84970 0.84732 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.77 9.38 37.16 0.35 -2.42 16 2 C -0.15 -3.42 5.45 -26.73 -0.15 -3.57 16 3 C 0.20 4.99 1.95 -68.86 -0.13 4.86 16 4 H 0.03 0.72 7.32 -51.93 -0.38 0.34 16 5 C -0.57 -15.74 7.18 -34.44 -0.25 -15.99 16 6 H 0.06 1.64 7.82 -52.49 -0.41 1.23 16 7 C 0.02 0.50 5.29 -17.82 -0.09 0.40 16 8 N -0.92 -26.90 13.20 55.43 0.73 -26.17 16 9 Si 1.07 25.33 29.91 -169.99 -5.08 20.24 16 10 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 11 H -0.29 -6.67 7.11 56.52 0.40 -6.27 16 12 H -0.29 -6.55 7.11 56.52 0.40 -6.15 16 13 N -0.66 -14.45 5.76 -109.22 -0.63 -15.08 16 14 C 0.04 0.71 5.96 -4.98 -0.03 0.68 16 15 C 0.52 8.49 7.85 -10.98 -0.09 8.41 16 16 O -0.52 -10.58 15.97 5.56 0.09 -10.49 16 17 N -0.74 -8.96 5.00 -54.93 -0.27 -9.24 16 18 C 0.18 2.11 2.29 -69.08 -0.16 1.95 16 19 H 0.10 1.49 6.57 -51.93 -0.34 1.15 16 20 C -0.16 -1.68 9.47 37.16 0.35 -1.33 16 21 C -0.08 -0.76 5.06 -104.59 -0.53 -1.29 16 22 C -0.11 -0.84 9.23 -39.59 -0.37 -1.21 16 23 C -0.11 -0.73 10.05 -39.58 -0.40 -1.12 16 24 C -0.11 -0.72 10.05 -39.59 -0.40 -1.12 16 25 C -0.11 -0.82 9.83 -39.55 -0.39 -1.21 16 26 C -0.03 -0.28 6.31 -39.50 -0.25 -0.53 16 27 Cl -0.06 -0.62 27.13 -51.86 -1.41 -2.03 16 28 H 0.03 0.65 6.68 -51.93 -0.35 0.30 16 29 H 0.03 0.53 8.14 -51.93 -0.42 0.11 16 30 H 0.07 1.73 6.89 -51.93 -0.36 1.37 16 31 H 0.02 0.40 7.13 -51.93 -0.37 0.03 16 32 H 0.07 1.67 6.17 -51.93 -0.32 1.35 16 33 H 0.27 7.71 5.62 -40.82 -0.23 7.48 16 34 H 0.34 7.42 6.62 -39.29 -0.26 7.16 16 35 H 0.09 1.55 7.95 -51.93 -0.41 1.13 16 36 H 0.05 0.72 7.20 -51.93 -0.37 0.35 16 37 H 0.40 3.66 6.21 -40.82 -0.25 3.41 16 38 H 0.07 0.88 8.14 -51.93 -0.42 0.46 16 39 H 0.07 0.66 7.86 -51.93 -0.41 0.25 16 40 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 41 H 0.13 0.83 6.08 -52.48 -0.32 0.51 16 42 H 0.13 0.58 8.06 -52.49 -0.42 0.16 16 43 H 0.13 0.54 8.06 -52.49 -0.42 0.11 16 44 H 0.13 0.81 8.06 -52.48 -0.42 0.38 16 LS Contribution 368.35 15.07 5.55 5.55 Total: -1.00 -32.42 368.35 -9.66 -42.08 By element: Atomic # 1 Polarization: 14.74 SS G_CDS: -6.12 Total: 8.63 kcal Atomic # 6 Polarization: -10.98 SS G_CDS: -2.52 Total: -13.50 kcal Atomic # 7 Polarization: -50.31 SS G_CDS: -0.17 Total: -50.48 kcal Atomic # 8 Polarization: -10.58 SS G_CDS: 0.09 Total: -10.49 kcal Atomic # 14 Polarization: 25.33 SS G_CDS: -5.08 Total: 20.24 kcal Atomic # 17 Polarization: -0.62 SS G_CDS: -1.41 Total: -2.03 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -32.42 -9.66 -42.08 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000578080185.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.208 kcal (2) G-P(sol) polarization free energy of solvation -32.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.213 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.662 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.083 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.875 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds