Wall clock time and date at job start Tue Mar 31 2020 14:05:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52999 * 109.46626 * 2 1 4 4 C 1.52997 * 109.47127 * 240.00461 * 2 1 3 5 5 N 1.46500 * 109.47170 * 294.99688 * 4 2 1 6 6 C 1.46500 * 120.00344 * 270.00460 * 5 4 2 7 7 C 1.50692 * 109.47281 * 89.99476 * 6 5 4 8 8 O 1.21285 * 120.00181 * 0.02562 * 7 6 5 9 9 N 1.34779 * 120.00156 * 180.02562 * 7 6 5 10 10 C 1.46501 * 120.00160 * 179.97438 * 9 7 6 11 11 C 1.50705 * 109.47031 * 179.97438 * 10 9 7 12 12 H 1.08006 * 119.99898 * 0.02562 * 11 10 9 13 13 C 1.37872 * 119.99877 * 179.97438 * 11 10 9 14 14 N 1.31510 * 120.00137 * 0.02562 * 13 11 10 15 15 Si 1.86802 * 119.99959 * 180.02562 * 13 11 10 16 16 H 1.48503 * 109.47143 * 90.00025 * 15 13 11 17 17 H 1.48499 * 109.47359 * 210.00147 * 15 13 11 18 18 H 1.48504 * 109.47068 * 330.00367 * 15 13 11 19 19 C 1.39678 * 119.99785 * 89.99977 * 5 4 2 20 20 C 1.38934 * 120.06902 * 359.73143 * 19 5 4 21 21 C 1.38095 * 119.94784 * 179.72459 * 20 19 5 22 22 C 1.38277 * 120.08801 * 0.54632 * 21 20 19 23 23 C 1.38381 * 120.13869 * 359.72781 * 22 21 20 24 24 Cl 1.73601 * 119.97869 * 180.02562 * 23 22 21 25 25 C 1.38243 * 120.04922 * 359.97438 * 23 22 21 26 26 H 1.09001 * 109.46801 * 59.99811 * 1 2 3 27 27 H 1.09001 * 109.46998 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47050 * 299.99699 * 1 2 3 29 29 H 1.08993 * 109.46955 * 120.00472 * 2 1 3 30 30 H 1.08993 * 109.47839 * 299.99931 * 3 2 1 31 31 H 1.09000 * 109.47160 * 60.00369 * 3 2 1 32 32 H 1.09002 * 109.46719 * 180.02562 * 3 2 1 33 33 H 1.09006 * 109.47500 * 54.99635 * 4 2 1 34 34 H 1.09000 * 109.47325 * 174.99723 * 4 2 1 35 35 H 1.08994 * 109.47405 * 210.00158 * 6 5 4 36 36 H 1.09009 * 109.46592 * 329.99329 * 6 5 4 37 37 H 0.97007 * 119.99600 * 359.97438 * 9 7 6 38 38 H 1.08995 * 109.47321 * 299.99712 * 10 9 7 39 39 H 1.08998 * 109.46950 * 60.00121 * 10 9 7 40 40 H 0.97006 * 120.00058 * 179.97438 * 14 13 11 41 41 H 1.08000 * 120.02786 * 359.96586 * 20 19 5 42 42 H 1.08004 * 119.95275 * 180.25042 * 21 20 19 43 43 H 1.07999 * 119.93122 * 179.75013 * 22 21 20 44 44 H 1.07999 * 120.04914 * 180.02562 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7211 -1.2493 5 7 1.6526 -2.1327 -1.1907 6 6 2.5428 -3.1113 -0.5613 7 6 2.2129 -3.2205 0.9050 8 8 1.3215 -2.5475 1.3778 9 7 2.9084 -4.0659 1.6911 10 6 2.5881 -4.1717 3.1167 11 6 3.5038 -5.1784 3.7641 12 1 4.2501 -5.6881 3.1727 13 6 3.3896 -5.4479 5.1113 14 7 2.4812 -4.8268 5.8315 15 14 4.5252 -6.6952 5.9139 16 1 5.7453 -6.0078 6.4081 17 1 3.8251 -7.3410 7.0532 18 1 4.9082 -7.7285 4.9183 19 6 0.4342 -2.5456 -1.7348 20 6 -0.4138 -1.6180 -2.3270 21 6 -1.6152 -2.0298 -2.8692 22 6 -1.9803 -3.3623 -2.8135 23 6 -1.1411 -4.2885 -2.2196 24 17 -1.6034 -5.9605 -2.1526 25 6 0.0657 -3.8835 -1.6804 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 1.8933 -0.5139 0.8899 30 1 1.6767 1.9564 -0.8899 31 1 1.6766 1.9563 0.8900 32 1 3.1300 1.4425 -0.0005 33 1 1.6054 -0.2616 -2.1370 34 1 3.1264 -0.6442 -1.2952 35 1 2.4093 -4.0828 -1.0371 36 1 3.5776 -2.7888 -0.6780 37 1 3.6211 -4.6045 1.3128 38 1 2.7217 -3.2000 3.5922 39 1 1.5535 -4.4942 3.2337 40 1 2.4006 -5.0167 6.7794 41 1 -0.1319 -0.5762 -2.3666 42 1 -2.2726 -1.3093 -3.3331 43 1 -2.9223 -3.6810 -3.2348 44 1 0.7209 -4.6064 -1.2172 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000832426697.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:05:54 Heat of formation + Delta-G solvation = -19.376402 kcal Electronic energy + Delta-G solvation = -25652.954834 eV Core-core repulsion = 22016.877519 eV Total energy + Delta-G solvation = -3636.077315 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -40.20084 -38.57650 -37.10466 -36.13697 -34.36400 -34.10412 -32.34695 -30.81088 -30.15501 -28.47376 -26.94832 -26.78528 -24.97825 -22.85020 -22.30194 -21.27444 -19.88423 -19.59796 -17.96613 -17.28092 -16.13439 -15.80342 -15.66599 -15.28628 -15.00477 -14.57286 -14.49754 -14.35641 -14.05626 -13.71119 -13.61617 -13.29833 -12.90087 -12.58849 -12.24719 -12.17172 -12.02580 -11.96100 -11.72295 -11.54729 -11.48635 -11.22573 -11.15244 -11.00042 -10.90463 -10.84259 -10.68254 -10.36278 -10.24927 -9.86129 -9.41644 -9.02676 -8.74747 -8.71015 -7.89345 -7.27515 -6.18397 -4.25582 1.28332 1.53402 2.18578 3.00352 3.22544 3.29120 3.30217 3.31364 3.77610 4.12861 4.36942 4.75704 4.81195 4.99289 5.05904 5.10912 5.17838 5.20351 5.29196 5.33976 5.36679 5.46613 5.51606 5.56689 5.61907 5.72280 5.76771 5.84717 6.00505 6.06781 6.16487 6.30268 6.34629 6.45147 6.60849 6.65424 6.70216 7.14857 7.30062 7.41367 7.44701 7.49865 7.64894 7.95181 8.59512 8.76153 9.07437 9.41321 10.91647 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.010756 B = 0.003794 C = 0.003015 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2602.495717 B = 7378.843565 C = 9285.970858 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.120 4.120 3 C -0.145 4.145 4 C 0.132 3.868 5 N -0.599 5.599 6 C 0.098 3.902 7 C 0.471 3.529 8 O -0.533 6.533 9 N -0.713 5.713 10 C 0.253 3.747 11 C -0.544 4.544 12 H 0.062 0.938 13 C 0.064 3.936 14 N -0.885 5.885 15 Si 0.903 3.097 16 H -0.279 1.279 17 H -0.284 1.284 18 H -0.272 1.272 19 C 0.245 3.755 20 C -0.191 4.191 21 C -0.065 4.065 22 C -0.177 4.177 23 C 0.016 3.984 24 Cl -0.078 7.078 25 C -0.188 4.188 26 H 0.042 0.958 27 H 0.069 0.931 28 H 0.045 0.955 29 H 0.093 0.907 30 H 0.049 0.951 31 H 0.055 0.945 32 H 0.051 0.949 33 H 0.074 0.926 34 H 0.072 0.928 35 H 0.099 0.901 36 H 0.100 0.900 37 H 0.389 0.611 38 H 0.025 0.975 39 H 0.025 0.975 40 H 0.266 0.734 41 H 0.131 0.869 42 H 0.127 0.873 43 H 0.125 0.875 44 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.897 7.324 -19.697 21.213 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 C -0.140 4.140 3 C -0.203 4.203 4 C 0.009 3.991 5 N -0.307 5.307 6 C -0.030 4.030 7 C 0.254 3.746 8 O -0.410 6.410 9 N -0.363 5.363 10 C 0.132 3.868 11 C -0.582 4.582 12 H 0.081 0.919 13 C -0.139 4.139 14 N -0.522 5.522 15 Si 0.730 3.270 16 H -0.205 1.205 17 H -0.210 1.210 18 H -0.197 1.197 19 C 0.142 3.858 20 C -0.214 4.214 21 C -0.084 4.084 22 C -0.198 4.198 23 C -0.011 4.011 24 Cl -0.049 7.049 25 C -0.211 4.211 26 H 0.061 0.939 27 H 0.088 0.912 28 H 0.064 0.936 29 H 0.111 0.889 30 H 0.068 0.932 31 H 0.074 0.926 32 H 0.070 0.930 33 H 0.092 0.908 34 H 0.091 0.909 35 H 0.117 0.883 36 H 0.118 0.882 37 H 0.221 0.779 38 H 0.043 0.957 39 H 0.043 0.957 40 H 0.075 0.925 41 H 0.149 0.851 42 H 0.144 0.856 43 H 0.143 0.857 44 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -3.479 7.732 -19.059 20.859 hybrid contribution 0.901 -1.144 0.660 1.598 sum -2.578 6.588 -18.399 19.712 Atomic orbital electron populations 1.21892 0.94863 1.02667 0.99963 1.21682 0.97071 0.95305 0.99936 1.21804 1.00583 0.96341 1.01536 1.21585 0.99493 0.79913 0.98143 1.46104 1.17392 1.06865 1.60290 1.21447 0.94887 0.94630 0.91996 1.21124 0.83447 0.81297 0.88734 1.90663 1.30882 1.44104 1.75380 1.46491 1.36193 1.41341 1.12260 1.19056 0.96695 0.97130 0.73891 1.21225 1.18620 1.24060 0.94319 0.91941 1.24942 0.95590 0.96339 0.97070 1.69973 1.33139 1.41601 1.07530 0.86435 0.80437 0.81091 0.79070 1.20478 1.20989 1.19719 1.17529 0.85672 0.91850 0.90743 1.20898 0.95838 0.99384 1.05241 1.20760 0.95587 0.94840 0.97232 1.20711 1.00692 0.92762 1.05606 1.20559 0.95195 0.85004 1.00369 1.98363 1.92200 1.17093 1.97211 1.20483 0.97863 0.95140 1.07641 0.93917 0.91194 0.93569 0.88897 0.93165 0.92571 0.93014 0.90759 0.90928 0.88293 0.88166 0.77868 0.95727 0.95653 0.92452 0.85142 0.85556 0.85737 0.85283 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.86 7.51 37.16 0.28 -1.58 16 2 C -0.12 -1.55 2.58 -90.62 -0.23 -1.78 16 3 C -0.14 -1.51 9.19 37.16 0.34 -1.17 16 4 C 0.13 1.43 4.99 -4.04 -0.02 1.41 16 5 N -0.60 -7.61 2.02 -173.13 -0.35 -7.96 16 6 C 0.10 1.26 5.68 -5.20 -0.03 1.23 16 7 C 0.47 8.61 7.77 -10.99 -0.09 8.52 16 8 O -0.53 -11.73 13.52 5.55 0.08 -11.65 16 9 N -0.71 -14.16 5.55 -61.47 -0.34 -14.50 16 10 C 0.25 6.55 5.43 -5.19 -0.03 6.53 16 11 C -0.54 -14.54 9.28 -34.44 -0.32 -14.86 16 12 H 0.06 1.56 7.60 -52.48 -0.40 1.16 16 13 C 0.06 1.77 5.46 -17.82 -0.10 1.68 16 14 N -0.89 -26.00 13.29 55.43 0.74 -25.26 16 15 Si 0.90 20.73 29.54 -169.99 -5.02 15.71 16 16 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 17 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 18 H -0.27 -6.08 7.11 56.52 0.40 -5.67 16 19 C 0.25 3.27 5.39 -83.79 -0.45 2.82 16 20 C -0.19 -2.23 7.14 -39.38 -0.28 -2.51 16 21 C -0.07 -0.70 10.04 -39.62 -0.40 -1.10 16 22 C -0.18 -2.09 9.83 -39.51 -0.39 -2.48 16 23 C 0.02 0.22 6.32 -39.53 -0.25 -0.03 16 24 Cl -0.08 -1.02 28.95 -51.86 -1.50 -2.52 16 25 C -0.19 -2.67 8.99 -39.34 -0.35 -3.03 16 26 H 0.04 0.47 6.64 -51.93 -0.34 0.13 16 27 H 0.07 1.14 5.57 -51.93 -0.29 0.85 16 28 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 29 H 0.09 1.57 6.00 -51.93 -0.31 1.26 16 30 H 0.05 0.44 8.14 -51.93 -0.42 0.02 16 31 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 32 H 0.05 0.50 8.14 -51.93 -0.42 0.08 16 33 H 0.07 0.69 6.21 -51.93 -0.32 0.37 16 34 H 0.07 0.68 7.89 -51.93 -0.41 0.27 16 35 H 0.10 1.12 6.20 -51.93 -0.32 0.80 16 36 H 0.10 1.02 7.89 -51.92 -0.41 0.61 16 37 H 0.39 6.54 8.32 -40.82 -0.34 6.20 16 38 H 0.02 0.71 8.14 -51.93 -0.42 0.29 16 39 H 0.03 0.74 8.14 -51.93 -0.42 0.32 16 40 H 0.27 7.34 8.31 -40.82 -0.34 7.00 16 41 H 0.13 1.32 4.37 -52.49 -0.23 1.09 16 42 H 0.13 1.01 8.06 -52.48 -0.42 0.59 16 43 H 0.12 1.26 8.06 -52.49 -0.42 0.83 16 44 H 0.13 1.87 6.14 -52.49 -0.32 1.54 16 LS Contribution 365.89 15.07 5.51 5.51 Total: -1.00 -31.48 365.89 -9.42 -40.90 By element: Atomic # 1 Polarization: 12.33 SS G_CDS: -6.22 Total: 6.12 kcal Atomic # 6 Polarization: -4.03 SS G_CDS: -2.31 Total: -6.35 kcal Atomic # 7 Polarization: -47.77 SS G_CDS: 0.05 Total: -47.72 kcal Atomic # 8 Polarization: -11.73 SS G_CDS: 0.08 Total: -11.65 kcal Atomic # 14 Polarization: 20.73 SS G_CDS: -5.02 Total: 15.71 kcal Atomic # 17 Polarization: -1.02 SS G_CDS: -1.50 Total: -2.52 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -31.48 -9.42 -40.90 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000832426697.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.522 kcal (2) G-P(sol) polarization free energy of solvation -31.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.899 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.376 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds