Wall clock time and date at job start Tue Mar 31 2020 14:26:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.52999 * 109.47346 * 2 1 4 4 H 1.09005 * 109.47033 * 305.00007 * 3 2 1 5 5 C 1.52997 * 109.47264 * 184.99930 * 3 2 1 6 6 N 1.46505 * 109.46985 * 184.99674 * 5 3 2 7 7 C 1.34774 * 119.99861 * 180.02562 * 6 5 3 8 8 O 1.21286 * 120.00177 * 0.02562 * 7 6 5 9 9 C 1.50699 * 119.99902 * 180.02562 * 7 6 5 10 10 H 1.09000 * 109.47199 * 60.00559 * 9 7 6 11 11 C 1.53003 * 109.47323 * 300.00005 * 9 7 6 12 12 C 1.50703 * 109.47075 * 180.02562 * 9 7 6 13 13 C 1.38262 * 119.99481 * 240.00080 * 12 9 7 14 14 C 1.38220 * 120.02786 * 179.97438 * 13 12 9 15 15 C 1.38228 * 120.01327 * 0.02562 * 14 13 12 16 16 C 1.38335 * 119.98848 * 0.02562 * 15 14 13 17 17 Cl 1.73598 * 120.01250 * 180.02562 * 16 15 14 18 18 C 1.38198 * 119.99334 * 59.72354 * 12 9 7 19 19 N 1.46498 * 109.46890 * 64.99929 * 3 2 1 20 20 C 1.36935 * 120.00239 * 275.00034 * 19 3 2 21 21 H 1.08004 * 120.00069 * 0.02562 * 20 19 3 22 22 C 1.38811 * 120.00368 * 180.02562 * 20 19 3 23 23 N 1.31624 * 119.99540 * 359.72375 * 22 20 19 24 24 Si 1.86800 * 120.00451 * 180.02562 * 22 20 19 25 25 H 1.48501 * 109.47364 * 179.72253 * 24 22 20 26 26 H 1.48508 * 109.46883 * 299.72375 * 24 22 20 27 27 H 1.48497 * 109.46870 * 59.72186 * 24 22 20 28 28 H 1.08999 * 109.47447 * 180.02562 * 1 2 3 29 29 H 1.09005 * 109.47235 * 300.00051 * 1 2 3 30 30 H 1.08994 * 109.47808 * 59.99715 * 1 2 3 31 31 H 1.09005 * 109.47235 * 239.99949 * 2 1 3 32 32 H 1.09002 * 109.47057 * 119.99985 * 2 1 3 33 33 H 1.08996 * 109.47726 * 304.99907 * 5 3 2 34 34 H 1.09001 * 109.46766 * 65.00647 * 5 3 2 35 35 H 0.96994 * 120.00104 * 0.02562 * 6 5 3 36 36 H 1.09000 * 109.47366 * 180.02562 * 11 9 7 37 37 H 1.09005 * 109.47047 * 300.00132 * 11 9 7 38 38 H 1.08999 * 109.46690 * 59.99597 * 11 9 7 39 39 H 1.08004 * 119.98306 * 359.97402 * 13 12 9 40 40 H 1.08005 * 119.98753 * 180.02562 * 14 13 12 41 41 H 1.08003 * 120.00904 * 180.02562 * 15 14 13 42 42 H 1.07997 * 120.00277 * 0.02562 * 18 12 9 43 43 H 0.97004 * 119.99747 * 95.00774 * 19 3 2 44 44 H 0.97000 * 120.00481 * 0.27542 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 -0.8419 5 6 3.5648 1.4443 -0.1257 6 7 4.0630 2.8168 -0.0060 7 6 5.3856 3.0630 -0.0869 8 8 6.1633 2.1485 -0.2592 9 6 5.8981 4.4748 0.0368 10 1 5.6136 4.8809 1.0075 11 6 5.2932 5.3362 -1.0736 12 6 7.3999 4.4767 -0.0884 13 6 8.1795 4.9512 0.9503 14 6 9.5570 4.9528 0.8364 15 6 10.1560 4.4805 -0.3163 16 6 9.3766 4.0067 -1.3563 17 17 10.1283 3.4127 -2.8041 18 6 7.9979 3.9990 -1.2391 19 7 1.6524 2.0974 1.2518 20 6 0.4156 2.6734 1.3688 21 1 -0.2743 2.6446 0.5384 22 6 0.0486 3.2945 2.5548 23 7 0.8874 3.3249 3.5687 24 14 -1.6388 4.0796 2.7147 25 1 -1.7858 4.6654 4.0714 26 1 -1.7857 5.1494 1.6951 27 1 -2.6865 3.0484 2.5046 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 1.8933 -0.5139 -0.8900 32 1 1.8933 -0.5138 0.8900 33 1 3.9954 0.8311 0.6659 34 1 3.8498 1.0377 -1.0961 35 1 3.4410 3.5483 0.1315 36 1 5.6643 6.3572 -0.9844 37 1 5.5778 4.9300 -2.0443 38 1 4.2070 5.3347 -0.9835 39 1 7.7119 5.3207 1.8510 40 1 10.1654 5.3232 1.6483 41 1 11.2324 4.4814 -0.4051 42 1 7.3890 3.6246 -2.0486 43 1 2.2720 2.1231 1.9978 44 1 1.7635 2.9169 3.4858 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001753496232.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:26:12 Heat of formation + Delta-G solvation = -25.724987 kcal Electronic energy + Delta-G solvation = -25017.847668 eV Core-core repulsion = 21381.495058 eV Total energy + Delta-G solvation = -3636.352610 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -40.33047 -38.86429 -36.92213 -36.55179 -34.25050 -33.82158 -32.60738 -30.86746 -29.92809 -29.43346 -27.68280 -24.95236 -23.64422 -22.90190 -22.69366 -21.57627 -20.30156 -19.56947 -17.57957 -17.27048 -16.93295 -16.00935 -15.61715 -15.30197 -15.19364 -14.64406 -14.35047 -13.87064 -13.79009 -13.69157 -13.64961 -13.37664 -13.19114 -12.90490 -12.55597 -12.36952 -12.03064 -11.86553 -11.67127 -11.62282 -11.43314 -11.25383 -11.03836 -10.90370 -10.84083 -10.58893 -10.39151 -10.15349 -9.92768 -9.57941 -9.25551 -9.01839 -8.98676 -8.80084 -8.72665 -7.14981 -6.16894 -3.18663 1.01662 1.15089 2.00468 2.83362 3.30826 3.46004 3.48281 3.65719 3.66473 4.35616 4.58885 4.61764 4.87099 4.88177 4.99359 5.10771 5.16169 5.27531 5.30419 5.33920 5.49529 5.50865 5.56570 5.71638 5.77401 5.80437 5.86793 5.87447 5.97096 6.06087 6.08944 6.16208 6.28452 6.37966 6.44776 6.48344 6.52541 6.64357 6.79202 6.91886 7.17768 7.73528 7.82074 8.45963 8.66880 9.11704 9.98567 10.13669 11.30072 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.017629 B = 0.002811 C = 0.002560 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1587.917989 B = 9957.575710 C =10933.473131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.133 4.133 3 C 0.169 3.831 4 H 0.055 0.945 5 C 0.114 3.886 6 N -0.711 5.711 7 C 0.514 3.486 8 O -0.544 6.544 9 C -0.074 4.074 10 H 0.110 0.890 11 C -0.142 4.142 12 C -0.049 4.049 13 C -0.107 4.107 14 C -0.111 4.111 15 C -0.114 4.114 16 C -0.036 4.036 17 Cl -0.077 7.077 18 C -0.074 4.074 19 N -0.733 5.733 20 C -0.328 4.328 21 H 0.067 0.933 22 C -0.043 4.043 23 N -0.942 5.942 24 Si 1.075 2.925 25 H -0.286 1.286 26 H -0.295 1.295 27 H -0.295 1.295 28 H 0.032 0.968 29 H 0.085 0.915 30 H 0.040 0.960 31 H 0.043 0.957 32 H 0.054 0.946 33 H 0.062 0.938 34 H 0.064 0.936 35 H 0.410 0.590 36 H 0.069 0.931 37 H 0.061 0.939 38 H 0.071 0.929 39 H 0.130 0.870 40 H 0.131 0.869 41 H 0.130 0.870 42 H 0.130 0.870 43 H 0.368 0.632 44 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.428 3.901 -9.577 17.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.174 4.174 3 C 0.059 3.941 4 H 0.073 0.927 5 C -0.011 4.011 6 N -0.363 5.363 7 C 0.299 3.701 8 O -0.422 6.422 9 C -0.096 4.096 10 H 0.128 0.872 11 C -0.199 4.199 12 C -0.050 4.050 13 C -0.125 4.125 14 C -0.129 4.129 15 C -0.133 4.133 16 C -0.063 4.063 17 Cl -0.048 7.048 18 C -0.092 4.092 19 N -0.376 5.376 20 C -0.459 4.459 21 H 0.085 0.915 22 C -0.241 4.241 23 N -0.587 5.587 24 Si 0.906 3.094 25 H -0.211 1.211 26 H -0.223 1.223 27 H -0.223 1.223 28 H 0.051 0.949 29 H 0.104 0.896 30 H 0.059 0.941 31 H 0.062 0.938 32 H 0.073 0.927 33 H 0.080 0.920 34 H 0.082 0.918 35 H 0.246 0.754 36 H 0.088 0.912 37 H 0.080 0.920 38 H 0.090 0.910 39 H 0.147 0.853 40 H 0.149 0.851 41 H 0.148 0.852 42 H 0.148 0.852 43 H 0.201 0.799 44 H 0.066 0.934 Dipole moment (debyes) X Y Z Total from point charges 13.842 4.030 -8.975 16.982 hybrid contribution 0.889 -0.773 -0.831 1.442 sum 14.731 3.257 -9.805 17.993 Atomic orbital electron populations 1.21762 0.95558 0.99632 1.03348 1.22058 0.97131 0.98278 0.99963 1.20496 0.89806 0.92747 0.91058 0.92743 1.21688 0.95590 0.82669 1.01139 1.45969 1.07018 1.10738 1.72550 1.20339 0.82568 0.90496 0.76704 1.90703 1.55940 1.46182 1.49344 1.20329 0.91869 0.94511 1.02857 0.87211 1.21808 1.01410 0.99528 0.97160 1.19297 0.93965 0.98046 0.93666 1.21176 0.93789 0.99264 0.98275 1.21031 0.94680 0.99872 0.97305 1.21013 0.99992 0.99583 0.92694 1.20854 0.93096 1.02895 0.89420 1.98360 1.82227 1.87086 1.37126 1.20795 0.92338 0.97661 0.98433 1.42464 1.16814 1.67046 1.11288 1.19991 0.92620 1.32275 1.00976 0.91471 1.25695 1.05662 1.00439 0.92272 1.70892 1.08439 1.47406 1.31925 0.83300 0.74374 0.75895 0.75807 1.21139 1.22289 1.22295 0.94863 0.89616 0.94090 0.93784 0.92719 0.91990 0.91788 0.75376 0.91152 0.91957 0.91042 0.85255 0.85079 0.85200 0.85222 0.79895 0.93354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.60 9.18 37.15 0.34 -2.26 16 2 C -0.13 -2.29 5.61 -26.73 -0.15 -2.44 16 3 C 0.17 3.06 2.59 -67.93 -0.18 2.88 16 4 H 0.05 1.01 8.08 -51.93 -0.42 0.59 16 5 C 0.11 1.88 5.23 -4.04 -0.02 1.86 16 6 N -0.71 -11.13 5.28 -60.29 -0.32 -11.45 16 7 C 0.51 7.97 7.02 -10.99 -0.08 7.90 16 8 O -0.54 -10.13 15.09 5.55 0.08 -10.05 16 9 C -0.07 -0.91 2.90 -92.92 -0.27 -1.18 16 10 H 0.11 1.24 7.88 -51.93 -0.41 0.83 16 11 C -0.14 -1.45 8.90 37.16 0.33 -1.12 16 12 C -0.05 -0.61 4.40 -104.63 -0.46 -1.07 16 13 C -0.11 -1.16 9.67 -39.58 -0.38 -1.55 16 14 C -0.11 -1.08 10.04 -39.59 -0.40 -1.48 16 15 C -0.11 -1.19 9.83 -39.55 -0.39 -1.58 16 16 C -0.04 -0.43 6.32 -39.50 -0.25 -0.68 16 17 Cl -0.08 -0.87 28.96 -51.86 -1.50 -2.37 16 18 C -0.07 -0.95 7.71 -39.55 -0.30 -1.25 16 19 N -0.73 -16.17 4.50 -53.43 -0.24 -16.41 16 20 C -0.33 -8.19 7.75 -15.06 -0.12 -8.30 16 21 H 0.07 1.67 7.32 -52.48 -0.38 1.28 16 22 C -0.04 -1.14 5.50 -17.43 -0.10 -1.24 16 23 N -0.94 -27.23 13.70 55.49 0.76 -26.47 16 24 Si 1.08 24.39 29.92 -169.99 -5.09 19.31 16 25 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 26 H -0.30 -6.39 7.11 56.52 0.40 -5.99 16 27 H -0.30 -6.48 7.11 56.52 0.40 -6.08 16 28 H 0.03 0.52 8.14 -51.93 -0.42 0.10 16 29 H 0.09 1.82 5.99 -51.93 -0.31 1.51 16 30 H 0.04 0.69 8.14 -51.93 -0.42 0.27 16 31 H 0.04 0.66 8.14 -51.93 -0.42 0.24 16 32 H 0.05 0.98 8.14 -51.93 -0.42 0.56 16 33 H 0.06 1.10 8.14 -51.93 -0.42 0.67 16 34 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 35 H 0.41 6.45 7.55 -40.82 -0.31 6.14 16 36 H 0.07 0.62 8.14 -51.93 -0.42 0.20 16 37 H 0.06 0.63 7.40 -51.93 -0.38 0.25 16 38 H 0.07 0.73 7.56 -51.93 -0.39 0.33 16 39 H 0.13 1.18 7.95 -52.48 -0.42 0.77 16 40 H 0.13 0.93 8.06 -52.48 -0.42 0.51 16 41 H 0.13 1.08 8.06 -52.48 -0.42 0.66 16 42 H 0.13 1.72 7.51 -52.49 -0.39 1.32 16 43 H 0.37 8.67 6.63 -40.82 -0.27 8.40 16 44 H 0.26 7.29 6.77 -40.82 -0.28 7.02 16 LS Contribution 375.20 15.07 5.65 5.65 Total: -1.00 -29.82 375.20 -9.64 -39.45 By element: Atomic # 1 Polarization: 20.41 SS G_CDS: -6.57 Total: 13.84 kcal Atomic # 6 Polarization: -9.09 SS G_CDS: -2.42 Total: -11.51 kcal Atomic # 7 Polarization: -54.53 SS G_CDS: 0.20 Total: -54.33 kcal Atomic # 8 Polarization: -10.13 SS G_CDS: 0.08 Total: -10.05 kcal Atomic # 14 Polarization: 24.39 SS G_CDS: -5.09 Total: 19.31 kcal Atomic # 17 Polarization: -0.87 SS G_CDS: -1.50 Total: -2.37 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -29.82 -9.64 -39.45 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001753496232.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.727 kcal (2) G-P(sol) polarization free energy of solvation -29.816 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.636 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.452 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds