Wall clock time and date at job start Tue Mar 31 2020 15:30:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53009 * 109.47267 * 2 1 4 4 C 1.53004 * 109.47495 * 239.99907 * 2 1 3 5 5 H 1.09001 * 109.47419 * 180.02562 * 4 2 1 6 6 C 1.52997 * 109.46886 * 59.99836 * 4 2 1 7 7 N 1.46498 * 109.46715 * 300.00035 * 4 2 1 8 8 C 1.34780 * 120.00123 * 204.99688 * 7 4 2 9 9 O 1.21282 * 119.99642 * 359.97438 * 8 7 4 10 10 C 1.50699 * 120.00204 * 180.02562 * 8 7 4 11 11 N 1.46500 * 109.46974 * 180.02562 * 10 8 7 12 12 C 1.38896 * 120.00096 * 179.97438 * 11 10 8 13 13 C 1.39551 * 119.84521 * 359.72992 * 12 11 10 14 14 C 1.36341 * 120.16936 * 179.75810 * 13 12 11 15 15 C 1.40910 * 119.85979 * 0.53105 * 14 13 12 16 16 C 1.41125 * 120.15514 * 179.73942 * 15 14 13 17 17 H 1.07996 * 119.99843 * 150.10530 * 16 15 14 18 18 C 1.39864 * 120.00035 * 330.11364 * 16 15 14 19 19 N 1.30901 * 120.00001 * 161.72233 * 18 16 15 20 20 Si 1.86805 * 119.99855 * 341.72008 * 18 16 15 21 21 H 1.48497 * 109.47108 * 95.41871 * 20 18 16 22 22 H 1.48501 * 109.46810 * 215.41738 * 20 18 16 23 23 H 1.48496 * 109.47020 * 335.41728 * 20 18 16 24 24 C 1.40862 * 119.69340 * 359.71826 * 15 14 13 25 25 C 1.36434 * 119.83110 * 0.02562 * 24 15 14 26 26 Cl 1.73599 * 119.93219 * 179.97438 * 25 24 15 27 27 H 1.08995 * 109.47291 * 300.00345 * 1 2 3 28 28 H 1.08993 * 109.47155 * 179.97438 * 1 2 3 29 29 H 1.08999 * 109.46834 * 60.00371 * 1 2 3 30 30 H 1.09007 * 109.47099 * 119.99823 * 2 1 3 31 31 H 1.08996 * 109.46736 * 59.99507 * 3 2 1 32 32 H 1.08995 * 109.46836 * 179.97438 * 3 2 1 33 33 H 1.08999 * 109.46891 * 299.99594 * 3 2 1 34 34 H 1.09006 * 109.47055 * 179.97438 * 6 4 2 35 35 H 1.09001 * 109.47325 * 300.00344 * 6 4 2 36 36 H 1.09002 * 109.46920 * 60.00563 * 6 4 2 37 37 H 0.96998 * 120.00532 * 25.00465 * 7 4 2 38 38 H 1.09003 * 109.46758 * 299.99281 * 10 8 7 39 39 H 1.08995 * 109.47185 * 59.99689 * 10 8 7 40 40 H 0.97007 * 119.99857 * 359.97438 * 11 10 8 41 41 H 1.08001 * 119.91480 * 359.97438 * 13 12 11 42 42 H 1.08005 * 120.07211 * 180.24616 * 14 13 12 43 43 H 0.97000 * 119.99898 * 180.02562 * 19 18 16 44 44 H 1.08004 * 120.08319 * 180.02562 * 24 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7213 -1.2492 5 1 3.1301 -0.7217 -1.2490 6 6 1.5301 -0.0001 -2.4984 7 7 1.5517 -2.1025 -1.2492 8 6 2.2285 -3.0566 -1.9186 9 8 3.2416 -2.7716 -2.5214 10 6 1.7259 -4.4773 -1.9190 11 7 2.6302 -5.3150 -2.7106 12 6 2.3712 -6.6718 -2.8560 13 6 1.2516 -7.2348 -2.2420 14 6 0.9884 -8.5649 -2.3844 15 6 1.8559 -9.3744 -3.1445 16 6 1.5923 -10.7530 -3.2915 17 1 1.9049 -11.2701 -4.1866 18 6 0.9262 -11.4495 -2.2779 19 7 0.3664 -12.6043 -2.5363 20 14 0.8353 -10.7320 -0.5556 21 1 -0.4447 -9.9971 -0.3924 22 1 0.9068 -11.8295 0.4422 23 1 1.9717 -9.7990 -0.3476 24 6 2.9871 -8.8010 -3.7575 25 6 3.2357 -7.4675 -3.6111 26 17 4.6295 -6.7583 -4.3648 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5138 -0.8900 30 1 1.8933 -0.5138 0.8901 31 1 1.6766 1.9564 0.8899 32 1 3.1300 1.4425 0.0005 33 1 1.6768 1.9563 -0.8900 34 1 1.8939 -0.5136 -3.3885 35 1 0.4401 0.0000 -2.4985 36 1 1.8935 1.0276 -2.4985 37 1 0.7413 -2.3304 -0.7674 38 1 1.6890 -4.8499 -0.8953 39 1 0.7268 -4.5091 -2.3535 40 1 3.4100 -4.9220 -3.1332 41 1 0.5901 -6.6146 -1.6553 42 1 0.1193 -8.9983 -1.9117 43 1 -0.0959 -13.0872 -1.8334 44 1 3.6560 -9.4155 -4.3419 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000453119410.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:30:00 Heat of formation + Delta-G solvation = -36.642067 kcal Electronic energy + Delta-G solvation = -24574.342867 eV Core-core repulsion = 20937.516857 eV Total energy + Delta-G solvation = -3636.826010 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.135 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -40.22482 -38.48196 -37.58087 -35.62183 -34.99925 -33.55669 -33.08537 -30.32252 -29.79107 -29.43431 -27.71686 -27.04667 -24.62193 -23.66799 -21.95870 -20.83917 -20.14953 -19.72179 -17.82333 -17.53291 -16.59739 -16.18859 -15.72056 -15.48634 -15.12983 -14.99351 -14.35482 -14.20047 -13.82000 -13.60347 -13.45607 -13.22598 -13.03014 -12.77125 -12.59989 -12.56148 -12.46967 -12.30517 -12.22750 -11.81259 -11.52040 -11.43160 -11.07675 -10.94609 -10.93085 -10.73896 -10.45013 -10.35158 -9.97488 -9.91363 -9.65593 -9.41080 -9.31499 -8.84724 -7.81434 -6.89132 -6.75199 -4.31172 2.40648 2.49781 2.59264 2.85716 3.07869 3.09411 3.21854 3.32117 3.99488 4.16339 4.26844 4.41118 4.43945 4.57858 4.64028 4.97215 5.02180 5.11605 5.23023 5.32130 5.35281 5.37068 5.44147 5.45654 5.48793 5.61988 5.64441 5.73980 5.78297 5.85318 6.07416 6.16125 6.26083 6.46802 6.60904 6.82339 6.97535 7.24120 7.25490 7.28510 7.71275 7.81685 8.03029 8.08112 8.36313 8.44944 8.64148 8.82469 10.14365 Molecular weight = 324.13amu Principal moments of inertia in cm(-1) A = 0.016671 B = 0.002852 C = 0.002511 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1679.140923 B = 9814.048549 C =11149.409759 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.104 4.104 3 C -0.147 4.147 4 C 0.146 3.854 5 H 0.087 0.913 6 C -0.168 4.168 7 N -0.728 5.728 8 C 0.511 3.489 9 O -0.533 6.533 10 C 0.117 3.883 11 N -0.746 5.746 12 C 0.102 3.898 13 C -0.135 4.135 14 C -0.194 4.194 15 C 0.069 3.931 16 C -0.448 4.448 17 H 0.090 0.910 18 C 0.083 3.917 19 N -0.815 5.815 20 Si 0.907 3.093 21 H -0.272 1.272 22 H -0.291 1.291 23 H -0.244 1.244 24 C -0.162 4.162 25 C -0.046 4.046 26 Cl -0.112 7.112 27 H 0.058 0.942 28 H 0.054 0.946 29 H 0.062 0.938 30 H 0.076 0.924 31 H 0.058 0.942 32 H 0.057 0.943 33 H 0.061 0.939 34 H 0.060 0.940 35 H 0.060 0.940 36 H 0.067 0.933 37 H 0.400 0.600 38 H 0.080 0.920 39 H 0.081 0.919 40 H 0.404 0.596 41 H 0.103 0.897 42 H 0.107 0.893 43 H 0.283 0.717 44 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.660 22.674 6.726 23.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.123 4.123 3 C -0.205 4.205 4 C 0.041 3.959 5 H 0.106 0.894 6 C -0.226 4.226 7 N -0.382 5.382 8 C 0.297 3.703 9 O -0.408 6.408 10 C -0.012 4.012 11 N -0.386 5.386 12 C 0.003 3.997 13 C -0.158 4.158 14 C -0.214 4.214 15 C 0.065 3.935 16 C -0.477 4.477 17 H 0.108 0.892 18 C -0.134 4.134 19 N -0.440 5.440 20 Si 0.733 3.267 21 H -0.198 1.198 22 H -0.219 1.219 23 H -0.168 1.168 24 C -0.183 4.183 25 C -0.076 4.076 26 Cl -0.084 7.084 27 H 0.077 0.923 28 H 0.073 0.927 29 H 0.081 0.919 30 H 0.095 0.905 31 H 0.077 0.923 32 H 0.076 0.924 33 H 0.080 0.920 34 H 0.080 0.920 35 H 0.079 0.921 36 H 0.086 0.914 37 H 0.236 0.764 38 H 0.098 0.902 39 H 0.099 0.901 40 H 0.242 0.758 41 H 0.121 0.879 42 H 0.124 0.876 43 H 0.094 0.906 44 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -1.060 22.727 6.353 23.622 hybrid contribution -0.256 0.213 0.837 0.901 sum -1.316 22.940 7.190 24.077 Atomic orbital electron populations 1.21932 0.94839 1.01808 1.02414 1.21385 0.96433 0.96881 0.97628 1.21860 1.01321 0.95047 1.02270 1.20961 0.99837 0.80328 0.94741 0.89444 1.22284 1.01571 1.00614 0.98094 1.46089 1.29516 1.08454 1.54105 1.20831 0.83739 0.87542 0.78140 1.90688 1.24785 1.82507 1.42867 1.20805 0.95185 0.87265 0.97935 1.43668 1.30410 1.04956 1.59589 1.16901 0.96919 0.83085 1.02794 1.19895 0.96925 0.95577 1.03384 1.20730 1.00894 0.93044 1.06720 1.17515 0.89999 0.93918 0.92110 1.19260 1.31332 0.92458 1.04652 0.89207 1.26082 0.91417 0.94446 1.01493 1.69727 1.24978 1.13848 1.35422 0.86385 0.80606 0.78701 0.80961 1.19794 1.21887 1.16753 1.20576 0.98935 0.91721 1.07049 1.19961 0.90553 0.93521 1.03563 1.98265 1.43532 1.84804 1.81799 0.92286 0.92689 0.91902 0.90547 0.92273 0.92364 0.91979 0.92050 0.92101 0.91434 0.76422 0.90239 0.90147 0.75755 0.87894 0.87574 0.90644 0.86833 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.77 8.67 37.16 0.32 -0.45 16 2 C -0.10 -0.63 2.91 -90.61 -0.26 -0.89 16 3 C -0.15 -0.78 8.84 37.16 0.33 -0.45 16 4 C 0.15 1.22 2.40 -67.93 -0.16 1.06 16 5 H 0.09 0.91 7.58 -51.93 -0.39 0.52 16 6 C -0.17 -1.36 8.78 37.16 0.33 -1.03 16 7 N -0.73 -6.57 5.00 -53.81 -0.27 -6.84 16 8 C 0.51 6.59 7.86 -10.98 -0.09 6.50 16 9 O -0.53 -8.87 15.33 5.56 0.09 -8.78 16 10 C 0.12 1.56 5.37 -5.19 -0.03 1.54 16 11 N -0.75 -13.15 5.63 -59.64 -0.34 -13.48 16 12 C 0.10 2.07 6.67 -83.64 -0.56 1.51 16 13 C -0.14 -2.75 9.23 -39.78 -0.37 -3.12 16 14 C -0.19 -4.45 7.11 -39.25 -0.28 -4.73 16 15 C 0.07 1.70 5.10 -106.80 -0.54 1.15 16 16 C -0.45 -11.90 9.55 -37.88 -0.36 -12.26 16 17 H 0.09 2.51 8.06 -52.49 -0.42 2.09 16 18 C 0.08 2.15 5.40 -17.34 -0.09 2.06 16 19 N -0.81 -21.59 13.93 55.54 0.77 -20.81 16 20 Si 0.91 20.25 24.51 -169.99 -4.17 16.08 16 21 H -0.27 -5.79 6.70 56.52 0.38 -5.41 16 22 H -0.29 -6.34 7.11 56.52 0.40 -5.94 16 23 H -0.24 -5.59 6.87 56.52 0.39 -5.20 16 24 C -0.16 -3.76 9.50 -39.24 -0.37 -4.13 16 25 C -0.05 -0.99 6.30 -39.70 -0.25 -1.24 16 26 Cl -0.11 -2.14 27.55 -51.86 -1.43 -3.57 16 27 H 0.06 0.27 8.14 -51.93 -0.42 -0.15 16 28 H 0.05 0.26 6.50 -51.93 -0.34 -0.08 16 29 H 0.06 0.32 6.43 -51.93 -0.33 -0.01 16 30 H 0.08 0.48 8.14 -51.93 -0.42 0.06 16 31 H 0.06 0.27 8.14 -51.93 -0.42 -0.15 16 32 H 0.06 0.32 8.14 -51.93 -0.42 -0.10 16 33 H 0.06 0.31 6.43 -51.93 -0.33 -0.02 16 34 H 0.06 0.65 8.14 -51.93 -0.42 0.22 16 35 H 0.06 0.43 6.43 -51.93 -0.33 0.10 16 36 H 0.07 0.46 6.43 -51.93 -0.33 0.12 16 37 H 0.40 2.60 6.87 -40.82 -0.28 2.32 16 38 H 0.08 0.96 7.92 -51.93 -0.41 0.55 16 39 H 0.08 0.96 7.94 -51.93 -0.41 0.55 16 40 H 0.40 7.48 6.07 -40.82 -0.25 7.24 16 41 H 0.10 1.75 6.68 -52.49 -0.35 1.40 16 42 H 0.11 2.41 4.73 -52.48 -0.25 2.16 16 43 H 0.28 6.81 8.30 -40.82 -0.34 6.47 16 44 H 0.11 2.54 8.06 -52.48 -0.42 2.12 16 LS Contribution 361.45 15.07 5.45 5.45 Total: -1.00 -29.18 361.45 -8.43 -37.62 By element: Atomic # 1 Polarization: 14.98 SS G_CDS: -6.15 Total: 8.83 kcal Atomic # 6 Polarization: -12.09 SS G_CDS: -2.39 Total: -14.48 kcal Atomic # 7 Polarization: -41.31 SS G_CDS: 0.17 Total: -41.14 kcal Atomic # 8 Polarization: -8.87 SS G_CDS: 0.09 Total: -8.78 kcal Atomic # 14 Polarization: 20.25 SS G_CDS: -4.17 Total: 16.08 kcal Atomic # 17 Polarization: -2.14 SS G_CDS: -1.43 Total: -3.57 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -29.18 -8.43 -37.62 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000453119410.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.976 kcal (2) G-P(sol) polarization free energy of solvation -29.185 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.209 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.433 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.618 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.642 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds