Wall clock time and date at job start Tue Mar 31 2020 14:59:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35900 * 116.99435 * 2 1 4 4 C 1.38765 * 119.92674 * 0.02562 * 3 2 1 5 5 C 1.38139 * 120.05110 * 180.02562 * 4 3 2 6 6 F 1.35105 * 120.04429 * 180.02562 * 5 4 3 7 7 C 1.39602 * 119.90884 * 359.97438 * 5 4 3 8 8 C 1.48328 * 120.07643 * 180.02562 * 7 5 4 9 9 C 1.39023 * 120.42432 * 244.72150 * 8 7 5 10 10 C 1.40948 * 118.13052 * 179.73750 * 9 8 7 11 11 C 1.41369 * 120.57422 * 180.26261 * 10 9 8 12 12 H 1.08000 * 120.00200 * 203.72223 * 11 10 9 13 13 C 1.39893 * 120.00091 * 23.72027 * 11 10 9 14 14 N 1.30863 * 119.99792 * 17.43791 * 13 11 10 15 15 Si 1.86801 * 120.00226 * 197.44049 * 13 11 10 16 16 H 1.48502 * 109.47299 * 89.99962 * 15 13 11 17 17 H 1.48498 * 109.47083 * 209.99706 * 15 13 11 18 18 H 1.48496 * 109.46999 * 329.99529 * 15 13 11 19 19 C 1.40806 * 118.85547 * 0.51941 * 10 9 8 20 20 N 1.31513 * 120.70042 * 359.74024 * 19 10 9 21 21 C 1.32152 * 122.07870 * 0.02562 * 20 19 10 22 22 F 1.35105 * 119.46101 * 179.97438 * 21 20 19 23 23 C 1.39347 * 119.84905 * 0.02562 * 7 5 4 24 24 C 1.38018 * 119.94630 * 359.74424 * 23 7 5 25 25 Cl 1.73602 * 119.95709 * 180.25389 * 24 23 7 26 26 H 1.08992 * 109.47890 * 59.99932 * 1 2 3 27 27 H 1.09001 * 109.47323 * 299.99538 * 1 2 3 28 28 H 1.09000 * 109.46880 * 180.02562 * 1 2 3 29 29 H 1.07995 * 119.97317 * 0.02562 * 4 3 2 30 30 H 1.08000 * 120.93401 * 359.97438 * 9 8 7 31 31 H 0.96999 * 119.99995 * 180.02562 * 14 13 11 32 32 H 1.07995 * 119.65136 * 179.76713 * 19 10 9 33 33 H 1.08009 * 120.03252 * 180.02562 * 23 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0458 1.2109 0.0000 4 6 1.2885 2.3737 0.0005 5 6 1.9128 3.6059 0.0000 6 9 1.1753 4.7379 0.0011 7 6 3.3069 3.6799 -0.0005 8 6 3.9811 5.0011 -0.0005 9 6 4.7567 5.3957 -1.0848 10 6 5.3708 6.6634 -1.0362 11 6 6.1661 7.1189 -2.1126 12 1 6.9228 7.8709 -1.9446 13 6 5.9729 6.5955 -3.3955 14 7 4.8664 5.9584 -3.6824 15 14 7.2943 6.8059 -4.6989 16 1 8.2336 5.6571 -4.6416 17 1 6.6613 6.8612 -6.0411 18 1 8.0385 8.0667 -4.4503 19 6 5.1832 7.4661 0.1053 20 7 4.4439 7.0450 1.1082 21 6 3.8496 5.8647 1.0948 22 9 3.1023 5.4849 2.1543 23 6 4.0635 2.5098 -0.0011 24 6 3.4334 1.2819 0.0043 25 17 4.3758 -0.1761 0.0103 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 0.2101 2.3152 0.0014 30 1 4.8818 4.7506 -1.9418 31 1 4.7325 5.5952 -4.5718 32 1 5.6509 8.4381 0.1578 33 1 5.1422 2.5636 -0.0011 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001244353196.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:59:53 Heat of formation + Delta-G solvation = -83.906952 kcal Electronic energy + Delta-G solvation = -24526.291466 eV Core-core repulsion = 20406.943529 eV Total energy + Delta-G solvation = -4119.347936 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 325.042 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -48.62871 -47.58481 -40.13889 -38.51893 -37.29111 -36.22790 -34.24997 -32.23367 -30.50075 -30.41836 -28.71598 -27.11436 -25.59281 -23.22278 -22.70059 -21.83666 -20.85565 -18.55728 -17.67836 -17.09355 -16.70525 -16.23007 -16.13636 -15.90485 -15.63501 -15.14872 -14.87692 -14.67789 -14.47077 -14.14562 -13.67110 -13.22218 -13.06561 -12.73177 -12.45876 -12.33240 -12.10320 -11.84647 -11.67963 -11.54127 -11.52547 -11.37995 -11.29673 -10.86857 -10.81457 -10.68688 -10.16936 -9.55103 -8.89700 -8.60428 -8.50856 -7.98053 -7.61497 -7.08155 -4.68532 1.07474 1.17237 2.14250 2.29399 2.59678 2.92811 2.96258 2.98978 3.03617 3.51112 3.70631 4.26599 4.35010 4.65631 4.80685 4.94376 4.98466 5.08233 5.10129 5.25211 5.30992 5.44533 5.71243 5.94625 6.00887 6.04996 6.31045 6.43931 6.60328 6.68545 6.85343 6.87430 7.11369 7.35584 7.54194 7.68789 8.13996 8.40019 8.42163 9.15506 9.83788 Molecular weight = 325.04amu Principal moments of inertia in cm(-1) A = 0.012486 B = 0.004511 C = 0.003852 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2241.940091 B = 6205.897886 C = 7266.617364 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.302 6.302 3 C 0.156 3.844 4 C -0.237 4.237 5 C 0.162 3.838 6 F -0.121 7.121 7 C -0.068 4.068 8 C -0.105 4.105 9 C -0.093 4.093 10 C 0.055 3.945 11 C -0.438 4.438 12 H 0.090 0.910 13 C 0.073 3.927 14 N -0.782 5.782 15 Si 0.916 3.084 16 H -0.264 1.264 17 H -0.275 1.275 18 H -0.259 1.259 19 C 0.014 3.986 20 N -0.487 5.487 21 C 0.170 3.830 22 F -0.145 7.145 23 C -0.031 4.031 24 C -0.079 4.079 25 Cl -0.058 7.058 26 H 0.058 0.942 27 H 0.058 0.942 28 H 0.102 0.898 29 H 0.147 0.853 30 H 0.140 0.860 31 H 0.288 0.712 32 H 0.140 0.860 33 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.796 -10.550 1.110 11.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.215 6.215 3 C 0.109 3.891 4 C -0.257 4.257 5 C 0.143 3.857 6 F -0.100 7.100 7 C -0.070 4.070 8 C -0.108 4.108 9 C -0.118 4.118 10 C 0.050 3.950 11 C -0.467 4.467 12 H 0.108 0.892 13 C -0.147 4.147 14 N -0.406 5.406 15 Si 0.740 3.260 16 H -0.189 1.189 17 H -0.200 1.200 18 H -0.182 1.182 19 C -0.148 4.148 20 N -0.199 5.199 21 C 0.016 3.984 22 F -0.125 7.125 23 C -0.050 4.050 24 C -0.106 4.106 25 Cl -0.029 7.029 26 H 0.077 0.923 27 H 0.077 0.923 28 H 0.120 0.880 29 H 0.165 0.835 30 H 0.158 0.842 31 H 0.099 0.901 32 H 0.157 0.843 33 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -4.957 -10.446 1.674 11.683 hybrid contribution 0.020 -0.248 -1.222 1.247 sum -4.937 -10.693 0.452 11.787 Atomic orbital electron populations 1.23133 0.78085 1.04156 1.01743 1.86155 1.21556 1.25461 1.88291 1.18250 0.90089 0.84452 0.96279 1.20914 1.00976 0.90353 1.13478 1.17455 0.88434 0.81744 0.98110 1.91543 1.76379 1.49058 1.92978 1.18609 0.90653 0.93909 1.03834 1.18820 1.03320 0.92541 0.96153 1.21724 0.97544 0.96414 0.96101 1.18470 0.91934 0.91069 0.93535 1.19589 1.15873 1.19746 0.91498 0.89224 1.26033 0.95623 0.92870 1.00190 1.69774 1.22259 1.25765 1.22811 0.86153 0.80777 0.80310 0.78762 1.18903 1.20034 1.18221 1.22333 1.01704 0.99514 0.91209 1.66296 1.08852 1.14045 1.30698 1.17483 1.02065 0.93115 0.85716 1.91408 1.74704 1.90520 1.55836 1.20875 1.00865 0.87992 0.95290 1.19959 0.88473 0.88666 1.13530 1.98346 1.71855 1.35467 1.97244 0.92310 0.92338 0.87958 0.83506 0.84204 0.90086 0.84262 0.83162 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.20 9.81 101.05 0.99 1.19 16 2 O -0.30 -3.85 9.94 -19.43 -0.19 -4.04 16 3 C 0.16 2.30 6.68 -39.13 -0.26 2.04 16 4 C -0.24 -3.54 9.00 -39.42 -0.35 -3.90 16 5 C 0.16 3.00 7.07 -39.11 -0.28 2.73 16 6 F -0.12 -2.44 16.68 2.25 0.04 -2.41 16 7 C -0.07 -1.34 5.03 -104.82 -0.53 -1.86 16 8 C -0.10 -2.39 5.01 -104.76 -0.52 -2.92 16 9 C -0.09 -2.21 8.50 -38.27 -0.33 -2.54 16 10 C 0.05 1.33 5.59 -106.71 -0.60 0.74 16 11 C -0.44 -10.30 9.08 -37.77 -0.34 -10.64 16 12 H 0.09 1.98 7.90 -52.49 -0.41 1.56 16 13 C 0.07 1.63 5.18 -17.35 -0.09 1.54 16 14 N -0.78 -18.28 10.92 55.54 0.61 -17.67 16 15 Si 0.92 16.75 29.59 -169.99 -5.03 11.72 16 16 H -0.26 -4.80 7.11 56.52 0.40 -4.40 16 17 H -0.28 -4.99 7.11 56.52 0.40 -4.59 16 18 H -0.26 -4.66 7.11 56.52 0.40 -4.26 16 19 C 0.01 0.33 10.96 -16.72 -0.18 0.15 16 20 N -0.49 -12.11 10.33 -12.58 -0.13 -12.24 16 21 C 0.17 4.14 8.22 -16.72 -0.14 4.00 16 22 F -0.14 -3.42 16.69 2.25 0.04 -3.39 16 23 C -0.03 -0.54 9.50 -39.25 -0.37 -0.91 16 24 C -0.08 -1.23 6.33 -39.40 -0.25 -1.48 16 25 Cl -0.06 -0.82 28.49 -51.86 -1.48 -2.29 16 26 H 0.06 0.45 7.66 -51.93 -0.40 0.05 16 27 H 0.06 0.44 7.65 -51.93 -0.40 0.04 16 28 H 0.10 0.61 8.14 -51.93 -0.42 0.19 16 29 H 0.15 1.74 6.28 -52.49 -0.33 1.41 16 30 H 0.14 3.36 6.19 -52.49 -0.33 3.04 16 31 H 0.29 6.11 8.30 -40.82 -0.34 5.78 16 32 H 0.14 2.96 8.06 -52.49 -0.42 2.54 16 33 H 0.15 2.42 8.06 -52.48 -0.42 2.00 16 LS Contribution 318.15 15.07 4.79 4.79 Total: -1.00 -27.15 318.15 -6.87 -34.02 By element: Atomic # 1 Polarization: 5.63 SS G_CDS: -2.27 Total: 3.37 kcal Atomic # 6 Polarization: -8.62 SS G_CDS: -3.25 Total: -11.87 kcal Atomic # 7 Polarization: -30.38 SS G_CDS: 0.48 Total: -29.91 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.19 Total: -4.04 kcal Atomic # 9 Polarization: -5.87 SS G_CDS: 0.08 Total: -5.79 kcal Atomic # 14 Polarization: 16.75 SS G_CDS: -5.03 Total: 11.72 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.48 Total: -2.29 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -27.15 -6.87 -34.02 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001244353196.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.884 kcal (2) G-P(sol) polarization free energy of solvation -27.151 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.034 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.873 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.023 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.907 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds