Wall clock time and date at job start Tue Mar 31 2020 13:57:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.35643 * 124.93572 * 2 1 4 4 C 1.35457 * 107.13228 * 180.02562 * 3 2 1 5 5 Cl 1.73606 * 127.23818 * 179.97438 * 4 3 2 6 6 C 1.41545 * 105.52636 * 359.97438 * 4 3 2 7 7 C 1.47660 * 126.46613 * 179.97438 * 6 4 3 8 8 O 1.21575 * 119.99826 * 355.10919 * 7 6 4 9 9 N 1.34775 * 120.00369 * 175.11023 * 7 6 4 10 10 C 1.46502 * 119.99720 * 5.54523 * 9 7 6 11 11 C 1.50693 * 109.47368 * 275.44981 * 10 9 7 12 12 H 1.08001 * 119.99983 * 0.02562 * 11 10 9 13 13 C 1.37876 * 119.99990 * 180.02562 * 11 10 9 14 14 N 1.31507 * 120.00137 * 0.02562 * 13 11 10 15 15 Si 1.86802 * 119.99904 * 180.02562 * 13 11 10 16 16 H 1.48504 * 109.47512 * 90.00017 * 15 13 11 17 17 H 1.48503 * 109.47205 * 209.99927 * 15 13 11 18 18 H 1.48500 * 109.47081 * 329.99986 * 15 13 11 19 19 C 1.46503 * 120.00145 * 185.55091 * 9 7 6 20 20 C 1.53005 * 109.46899 * 265.04669 * 19 9 7 21 21 F 1.39900 * 109.46903 * 59.99921 * 20 19 9 22 22 F 1.39897 * 109.47032 * 179.97438 * 20 19 9 23 23 F 1.39897 * 109.46941 * 300.00189 * 20 19 9 24 24 N 1.28467 * 124.93274 * 180.32335 * 2 1 3 25 25 H 1.08999 * 109.47081 * 90.00051 * 1 2 3 26 26 H 1.09002 * 109.47680 * 210.00153 * 1 2 3 27 27 H 1.08999 * 109.47339 * 330.00228 * 1 2 3 28 28 H 1.08002 * 126.42987 * 0.05847 * 3 2 1 29 29 H 1.08999 * 109.46935 * 35.45782 * 10 9 7 30 30 H 1.09006 * 109.46984 * 155.45264 * 10 9 7 31 31 H 0.97003 * 120.00056 * 179.97438 * 14 13 11 32 32 H 1.09003 * 109.47164 * 25.04274 * 19 9 7 33 33 H 1.08994 * 109.47128 * 145.05044 * 19 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2417 1.1120 0.0000 4 6 3.5315 0.6978 -0.0006 5 17 4.9543 1.6926 -0.0015 6 6 3.4752 -0.7165 -0.0003 7 6 4.6269 -1.6406 -0.0013 8 8 5.7574 -1.2028 -0.0922 9 7 4.4249 -2.9694 0.0986 10 6 3.0617 -3.5060 0.0857 11 6 2.4867 -3.4502 1.4775 12 1 3.0773 -3.0542 2.2903 13 6 1.2065 -3.9047 1.7132 14 7 0.4875 -4.3874 0.7236 15 14 0.4934 -3.8348 3.4384 16 1 -0.1981 -2.5355 3.6360 17 1 -0.4771 -4.9444 3.6182 18 1 1.5885 -3.9690 4.4324 19 6 5.5684 -3.8771 0.2202 20 6 5.9483 -4.4070 -1.1640 21 9 6.2899 -3.3353 -1.9959 22 9 7.0406 -5.2733 -1.0480 23 9 4.8621 -5.0962 -1.7137 24 7 2.2006 -1.0532 -0.0059 25 1 -0.3633 0.0000 -1.0277 26 1 -0.3634 -0.8900 0.5138 27 1 -0.3634 0.8900 0.5138 28 1 1.8967 2.1354 0.0009 29 1 2.4436 -2.9115 -0.5870 30 1 3.0817 -4.5403 -0.2579 31 1 -0.4131 -4.7075 0.8895 32 1 6.4147 -3.3400 0.6485 33 1 5.3022 -4.7120 0.8683 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000599608698.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:57:12 Heat of formation + Delta-G solvation = -96.746001 kcal Electronic energy + Delta-G solvation = -26623.193416 eV Core-core repulsion = 22104.812263 eV Total energy + Delta-G solvation = -4518.381153 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 325.055 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.58768 -47.14859 -47.02259 -42.21876 -38.89350 -36.15885 -35.20422 -33.05231 -32.61881 -30.41505 -29.41697 -27.27701 -26.61031 -23.54710 -23.07712 -21.66866 -21.12628 -19.12457 -18.03744 -18.01065 -17.17649 -16.97584 -16.37403 -16.00622 -15.80496 -15.22660 -14.49486 -14.24308 -14.03454 -13.97423 -13.89986 -13.52788 -13.50428 -13.23548 -13.21527 -12.89346 -12.74029 -12.48565 -12.36116 -11.94752 -11.79792 -11.59799 -11.45684 -11.02572 -10.98898 -10.56399 -10.27130 -9.85967 -9.71956 -9.36923 -8.88057 -8.47259 -8.42203 -7.96148 -6.11713 -4.13837 2.11082 2.22435 2.28442 3.05612 3.17705 3.21517 3.26995 3.31355 3.56160 3.94942 4.32172 4.40180 4.53474 4.73599 4.80026 4.93367 5.17400 5.23296 5.29779 5.50733 5.60539 5.71545 5.75634 5.79827 6.39623 6.53216 6.93911 7.35788 7.54156 7.78997 8.04851 8.12711 8.31772 8.76967 8.89498 9.48092 10.96182 Molecular weight = 325.05amu Principal moments of inertia in cm(-1) A = 0.008874 B = 0.007648 C = 0.004676 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3154.611535 B = 3660.283681 C = 5986.694495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.092 3.908 2 N -0.284 5.284 3 C -0.023 4.023 4 C -0.104 4.104 5 Cl -0.025 7.025 6 C -0.008 4.008 7 C 0.605 3.395 8 O -0.538 6.538 9 N -0.587 5.587 10 C 0.228 3.772 11 C -0.512 4.512 12 H 0.055 0.945 13 C 0.071 3.929 14 N -0.888 5.888 15 Si 0.886 3.114 16 H -0.284 1.284 17 H -0.286 1.286 18 H -0.275 1.275 19 C 0.083 3.917 20 C 0.431 3.569 21 F -0.179 7.179 22 F -0.191 7.191 23 F -0.179 7.179 24 N -0.163 5.163 25 H 0.083 0.917 26 H 0.106 0.894 27 H 0.089 0.911 28 H 0.182 0.818 29 H 0.069 0.931 30 H 0.041 0.959 31 H 0.261 0.739 32 H 0.119 0.881 33 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.363 7.441 -2.088 7.847 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.049 4.049 2 N -0.073 5.073 3 C -0.166 4.166 4 C -0.142 4.142 5 Cl 0.003 6.997 6 C -0.168 4.168 7 C 0.393 3.607 8 O -0.414 6.414 9 N -0.318 5.318 10 C 0.110 3.890 11 C -0.551 4.551 12 H 0.073 0.927 13 C -0.131 4.131 14 N -0.527 5.527 15 Si 0.714 3.286 16 H -0.210 1.210 17 H -0.212 1.212 18 H -0.200 1.200 19 C -0.044 4.044 20 C 0.375 3.625 21 F -0.161 7.161 22 F -0.172 7.172 23 F -0.160 7.160 24 N 0.002 4.998 25 H 0.102 0.898 26 H 0.124 0.876 27 H 0.108 0.892 28 H 0.199 0.801 29 H 0.087 0.913 30 H 0.059 0.941 31 H 0.071 0.929 32 H 0.137 0.863 33 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 1.017 6.748 -2.214 7.175 hybrid contribution -0.054 0.652 0.835 1.061 sum 0.963 7.401 -1.379 7.589 Atomic orbital electron populations 1.22156 0.72796 1.05616 1.04289 1.45705 1.08071 1.02961 1.50612 1.22465 0.89522 0.94187 1.10402 1.20738 0.88620 0.90968 1.13835 1.98318 1.36610 1.67455 1.97315 1.21587 0.91799 0.91343 1.12078 1.16883 0.86402 0.81431 0.76025 1.90759 1.22558 1.77173 1.50897 1.48051 1.08811 1.04482 1.70444 1.19981 0.74539 0.95685 0.98838 1.21268 0.99188 1.41063 0.93557 0.92692 1.24758 0.96652 0.95283 0.96437 1.69938 1.10307 1.41731 1.30711 0.86704 0.79092 0.77464 0.85332 1.20992 1.21189 1.19970 1.22433 0.93737 0.97554 0.90671 1.21542 0.74344 0.75711 0.90896 1.93198 1.92274 1.55728 1.74867 1.93136 1.56253 1.71496 1.96353 1.93198 1.54711 1.80327 1.87795 1.74705 1.01397 1.10452 1.13263 0.89844 0.87583 0.89197 0.80072 0.91303 0.94113 0.92913 0.86312 0.85886 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 1.07 11.32 59.85 0.68 1.75 16 2 N -0.28 -4.62 3.72 -67.94 -0.25 -4.87 16 3 C -0.02 -0.34 11.49 -16.86 -0.19 -0.53 16 4 C -0.10 -1.85 6.80 -39.31 -0.27 -2.12 16 5 Cl -0.03 -0.42 28.19 -51.86 -1.46 -1.88 16 6 C -0.01 -0.16 6.74 -82.76 -0.56 -0.71 16 7 C 0.61 13.24 7.38 -12.41 -0.09 13.14 16 8 O -0.54 -12.01 15.07 5.30 0.08 -11.93 16 9 N -0.59 -12.48 2.39 -176.24 -0.42 -12.90 16 10 C 0.23 5.40 4.48 -5.20 -0.02 5.38 16 11 C -0.51 -12.85 8.05 -34.44 -0.28 -13.13 16 12 H 0.05 1.43 7.81 -52.49 -0.41 1.02 16 13 C 0.07 1.79 5.46 -17.82 -0.10 1.70 16 14 N -0.89 -23.32 13.29 55.43 0.74 -22.59 16 15 Si 0.89 19.92 29.54 -169.99 -5.02 14.90 16 16 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 17 H -0.29 -6.44 7.11 56.52 0.40 -6.03 16 18 H -0.27 -6.26 7.11 56.52 0.40 -5.85 16 19 C 0.08 1.48 5.43 -4.04 -0.02 1.45 16 20 C 0.43 7.65 3.29 37.16 0.12 7.77 16 21 F -0.18 -3.46 16.63 2.25 0.04 -3.43 16 22 F -0.19 -3.07 17.32 2.25 0.04 -3.03 16 23 F -0.18 -3.42 15.86 2.25 0.04 -3.39 16 24 N -0.16 -3.36 7.64 33.42 0.26 -3.10 16 25 H 0.08 0.81 8.14 -51.93 -0.42 0.39 16 26 H 0.11 1.48 8.14 -51.93 -0.42 1.05 16 27 H 0.09 0.71 8.13 -51.93 -0.42 0.28 16 28 H 0.18 1.80 8.06 -52.49 -0.42 1.38 16 29 H 0.07 1.74 5.64 -51.93 -0.29 1.45 16 30 H 0.04 1.02 6.93 -51.93 -0.36 0.66 16 31 H 0.26 6.56 8.31 -40.82 -0.34 6.22 16 32 H 0.12 1.96 7.36 -51.93 -0.38 1.58 16 33 H 0.12 1.99 8.11 -51.93 -0.42 1.57 16 LS Contribution 318.04 15.07 4.79 4.79 Total: -1.00 -30.29 318.04 -4.60 -34.89 By element: Atomic # 1 Polarization: 0.54 SS G_CDS: -2.69 Total: -2.15 kcal Atomic # 6 Polarization: 15.43 SS G_CDS: -0.73 Total: 14.70 kcal Atomic # 7 Polarization: -43.78 SS G_CDS: 0.32 Total: -43.46 kcal Atomic # 8 Polarization: -12.01 SS G_CDS: 0.08 Total: -11.93 kcal Atomic # 9 Polarization: -9.96 SS G_CDS: 0.11 Total: -9.85 kcal Atomic # 14 Polarization: 19.92 SS G_CDS: -5.02 Total: 14.90 kcal Atomic # 17 Polarization: -0.42 SS G_CDS: -1.46 Total: -1.88 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -30.29 -4.60 -34.89 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000599608698.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.858 kcal (2) G-P(sol) polarization free energy of solvation -30.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.888 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.746 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds