Wall clock time and date at job start Tue Mar 31 2020 13:57:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.35643 * 124.93572 * 2 1 4 4 C 1.35457 * 107.13228 * 180.02562 * 3 2 1 5 5 Cl 1.73606 * 127.23818 * 179.97438 * 4 3 2 6 6 C 1.41545 * 105.52636 * 359.97438 * 4 3 2 7 7 C 1.47660 * 126.46613 * 179.97438 * 6 4 3 8 8 O 1.21575 * 119.99826 * 355.10919 * 7 6 4 9 9 N 1.34775 * 120.00369 * 175.11023 * 7 6 4 10 10 C 1.46502 * 119.99720 * 5.54523 * 9 7 6 11 11 C 1.50693 * 109.47368 * 275.44981 * 10 9 7 12 12 H 1.08001 * 119.99983 * 0.02562 * 11 10 9 13 13 C 1.37876 * 119.99990 * 180.02562 * 11 10 9 14 14 N 1.31507 * 120.00137 * 0.02562 * 13 11 10 15 15 Si 1.86802 * 119.99904 * 180.02562 * 13 11 10 16 16 H 1.48504 * 109.47512 * 90.00017 * 15 13 11 17 17 H 1.48503 * 109.47205 * 209.99927 * 15 13 11 18 18 H 1.48500 * 109.47081 * 329.99986 * 15 13 11 19 19 C 1.46503 * 120.00145 * 185.55091 * 9 7 6 20 20 C 1.53005 * 109.46899 * 265.04669 * 19 9 7 21 21 F 1.39900 * 109.46903 * 59.99921 * 20 19 9 22 22 F 1.39897 * 109.47032 * 179.97438 * 20 19 9 23 23 F 1.39897 * 109.46941 * 300.00189 * 20 19 9 24 24 N 1.28467 * 124.93274 * 180.32335 * 2 1 3 25 25 H 1.08999 * 109.47081 * 90.00051 * 1 2 3 26 26 H 1.09002 * 109.47680 * 210.00153 * 1 2 3 27 27 H 1.08999 * 109.47339 * 330.00228 * 1 2 3 28 28 H 1.08002 * 126.42987 * 0.05847 * 3 2 1 29 29 H 1.08999 * 109.46935 * 35.45782 * 10 9 7 30 30 H 1.09006 * 109.46984 * 155.45264 * 10 9 7 31 31 H 0.97003 * 120.00056 * 179.97438 * 14 13 11 32 32 H 1.09003 * 109.47164 * 25.04274 * 19 9 7 33 33 H 1.08994 * 109.47128 * 145.05044 * 19 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2417 1.1120 0.0000 4 6 3.5315 0.6978 -0.0006 5 17 4.9543 1.6926 -0.0015 6 6 3.4752 -0.7165 -0.0003 7 6 4.6269 -1.6406 -0.0013 8 8 5.7574 -1.2028 -0.0922 9 7 4.4249 -2.9694 0.0986 10 6 3.0617 -3.5060 0.0857 11 6 2.4867 -3.4502 1.4775 12 1 3.0773 -3.0542 2.2903 13 6 1.2065 -3.9047 1.7132 14 7 0.4875 -4.3874 0.7236 15 14 0.4934 -3.8348 3.4384 16 1 -0.1981 -2.5355 3.6360 17 1 -0.4771 -4.9444 3.6182 18 1 1.5885 -3.9690 4.4324 19 6 5.5684 -3.8771 0.2202 20 6 5.9483 -4.4070 -1.1640 21 9 6.2899 -3.3353 -1.9959 22 9 7.0406 -5.2733 -1.0480 23 9 4.8621 -5.0962 -1.7137 24 7 2.2006 -1.0532 -0.0059 25 1 -0.3633 0.0000 -1.0277 26 1 -0.3634 -0.8900 0.5138 27 1 -0.3634 0.8900 0.5138 28 1 1.8967 2.1354 0.0009 29 1 2.4436 -2.9115 -0.5870 30 1 3.0817 -4.5403 -0.2579 31 1 -0.4131 -4.7075 0.8895 32 1 6.4147 -3.3400 0.6485 33 1 5.3022 -4.7120 0.8683 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000599608698.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:57:12 Heat of formation + Delta-G solvation = -114.548048 kcal Electronic energy + Delta-G solvation = -26623.965371 eV Core-core repulsion = 22104.812263 eV Total energy + Delta-G solvation = -4519.153107 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 325.055 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -51.05819 -48.58034 -48.54331 -43.53513 -40.52138 -37.45118 -36.89002 -34.56303 -34.23829 -31.76491 -30.91022 -28.93452 -27.99756 -25.07192 -24.83645 -23.11517 -22.38265 -20.61943 -19.52031 -19.47139 -18.82838 -18.40305 -18.02560 -17.52354 -17.17655 -16.77467 -16.27707 -15.57464 -15.47393 -15.43835 -15.40632 -14.99341 -14.88522 -14.73139 -14.70223 -14.34104 -14.24487 -13.79255 -13.66569 -13.45183 -13.35051 -13.12698 -12.78382 -12.73088 -12.67395 -12.12631 -12.00312 -11.70480 -11.32351 -10.94221 -10.45497 -10.16907 -9.80663 -9.59105 -8.06064 -6.13760 0.60424 1.01343 1.06746 1.39419 1.44994 1.51836 1.67301 1.84057 2.10988 2.38464 2.48150 2.91052 3.07501 3.26001 3.32210 3.52161 3.78260 3.95805 4.18336 4.34452 4.44118 4.48786 4.55415 4.77202 4.80228 4.99614 5.40782 5.65478 5.82312 5.93697 6.19753 6.32921 6.81330 6.98555 7.19829 7.51154 9.01623 Molecular weight = 325.05amu Principal moments of inertia in cm(-1) A = 0.008874 B = 0.007648 C = 0.004676 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3154.611535 B = 3660.283681 C = 5986.694495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.083 3.917 2 N -0.282 5.282 3 C 0.010 3.990 4 C -0.129 4.129 5 Cl -0.021 7.021 6 C -0.041 4.041 7 C 0.598 3.402 8 O -0.551 6.551 9 N -0.593 5.593 10 C 0.248 3.752 11 C -0.512 4.512 12 H 0.041 0.959 13 C 0.037 3.963 14 N -0.912 5.912 15 Si 0.939 3.061 16 H -0.275 1.275 17 H -0.284 1.284 18 H -0.279 1.279 19 C 0.079 3.921 20 C 0.438 3.562 21 F -0.189 7.189 22 F -0.178 7.178 23 F -0.188 7.188 24 N -0.204 5.204 25 H 0.104 0.896 26 H 0.079 0.921 27 H 0.137 0.863 28 H 0.235 0.765 29 H 0.054 0.946 30 H 0.023 0.977 31 H 0.263 0.737 32 H 0.132 0.868 33 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.434 8.939 -1.429 9.063 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.072 5.072 3 C -0.133 4.133 4 C -0.167 4.167 5 Cl 0.007 6.993 6 C -0.201 4.201 7 C 0.386 3.614 8 O -0.429 6.429 9 N -0.323 5.323 10 C 0.128 3.872 11 C -0.551 4.551 12 H 0.060 0.940 13 C -0.163 4.163 14 N -0.552 5.552 15 Si 0.766 3.234 16 H -0.200 1.200 17 H -0.210 1.210 18 H -0.204 1.204 19 C -0.047 4.047 20 C 0.382 3.618 21 F -0.170 7.170 22 F -0.159 7.159 23 F -0.170 7.170 24 N -0.040 5.040 25 H 0.122 0.878 26 H 0.098 0.902 27 H 0.155 0.845 28 H 0.251 0.749 29 H 0.072 0.928 30 H 0.041 0.959 31 H 0.072 0.928 32 H 0.150 0.850 33 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 0.092 8.235 -1.555 8.381 hybrid contribution 0.215 0.235 0.598 0.678 sum 0.307 8.470 -0.957 8.530 Atomic orbital electron populations 1.22540 0.70353 1.06604 1.06023 1.46158 1.09446 1.02627 1.48922 1.23180 0.87958 0.95609 1.06534 1.20973 0.90154 0.90058 1.15523 1.98309 1.36695 1.66869 1.97393 1.21666 0.91793 0.92659 1.13950 1.17201 0.86896 0.81670 0.75622 1.90724 1.23100 1.77347 1.51696 1.48008 1.08786 1.04967 1.70589 1.19557 0.75626 0.94196 0.97812 1.21271 0.99310 1.40819 0.93674 0.94030 1.25284 0.96822 0.94963 0.99221 1.70023 1.10581 1.42380 1.32217 0.85872 0.78227 0.77730 0.81601 1.20039 1.20993 1.20429 1.22641 0.93256 0.97774 0.90986 1.21432 0.74374 0.75535 0.90489 1.93179 1.92340 1.56310 1.75200 1.93159 1.55511 1.71007 1.96258 1.93181 1.55339 1.80492 1.87948 1.74588 1.01773 1.12740 1.14913 0.87790 0.90247 0.84491 0.74857 0.92807 0.95907 0.92781 0.84994 0.84425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.72 11.32 127.77 1.45 3.16 16 2 N -0.28 -8.60 3.72 -368.87 -1.37 -9.97 16 3 C 0.01 0.26 11.49 83.46 0.96 1.22 16 4 C -0.13 -4.43 6.80 22.44 0.15 -4.28 16 5 Cl -0.02 -0.67 28.19 -2.72 -0.08 -0.75 16 6 C -0.04 -1.73 6.74 42.45 0.29 -1.44 16 7 C 0.60 26.48 7.38 86.73 0.64 27.12 16 8 O -0.55 -24.82 15.07 -3.95 -0.06 -24.88 16 9 N -0.59 -25.60 2.39 -829.77 -1.98 -27.58 16 10 C 0.25 11.98 4.48 85.63 0.38 12.36 16 11 C -0.51 -25.94 8.05 25.60 0.21 -25.74 16 12 H 0.04 2.19 7.81 -2.91 -0.02 2.16 16 13 C 0.04 1.88 5.46 84.66 0.46 2.34 16 14 N -0.91 -48.12 13.29 21.45 0.28 -47.83 16 15 Si 0.94 40.47 29.54 68.60 2.03 42.50 16 16 H -0.27 -11.37 7.11 99.48 0.71 -10.67 16 17 H -0.28 -12.11 7.11 99.48 0.71 -11.40 16 18 H -0.28 -12.15 7.11 99.48 0.71 -11.44 16 19 C 0.08 2.83 5.43 86.38 0.47 3.29 16 20 C 0.44 15.50 3.29 71.98 0.24 15.73 16 21 F -0.19 -7.33 16.63 44.97 0.75 -6.58 16 22 F -0.18 -5.58 17.32 44.97 0.78 -4.81 16 23 F -0.19 -7.27 15.86 44.97 0.71 -6.56 16 24 N -0.20 -8.34 7.64 -48.17 -0.37 -8.71 16 25 H 0.10 1.73 8.14 -2.39 -0.02 1.71 16 26 H 0.08 2.12 8.14 -2.39 -0.02 2.10 16 27 H 0.14 1.51 8.13 -2.39 -0.02 1.49 16 28 H 0.24 3.35 8.06 -2.91 -0.02 3.33 16 29 H 0.05 2.80 5.64 -2.39 -0.01 2.79 16 30 H 0.02 1.17 6.93 -2.38 -0.02 1.16 16 31 H 0.26 13.20 8.31 -92.71 -0.77 12.43 16 32 H 0.13 4.33 7.36 -2.39 -0.02 4.31 16 33 H 0.14 4.43 8.11 -2.39 -0.02 4.41 16 Total: -1.00 -66.12 318.04 7.11 -59.01 By element: Atomic # 1 Polarization: 1.20 SS G_CDS: 1.18 Total: 2.38 kcal Atomic # 6 Polarization: 28.54 SS G_CDS: 5.24 Total: 33.78 kcal Atomic # 7 Polarization: -90.65 SS G_CDS: -3.44 Total: -94.09 kcal Atomic # 8 Polarization: -24.82 SS G_CDS: -0.06 Total: -24.88 kcal Atomic # 9 Polarization: -20.19 SS G_CDS: 2.24 Total: -17.95 kcal Atomic # 14 Polarization: 40.47 SS G_CDS: 2.03 Total: 42.50 kcal Atomic # 17 Polarization: -0.67 SS G_CDS: -0.08 Total: -0.75 kcal Total: -66.12 7.11 -59.01 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000599608698.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.541 kcal (2) G-P(sol) polarization free energy of solvation -66.122 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 7.115 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -59.007 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds