Wall clock time and date at job start Tue Mar 31 2020 14:22:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 N 1.40084 * 126.03495 * 2 1 4 4 C 1.30830 * 108.23819 * 179.75528 * 3 2 1 5 5 C 1.50702 * 125.89321 * 180.25407 * 4 3 2 6 6 F 1.39896 * 109.47292 * 270.21652 * 5 4 3 7 7 F 1.39903 * 109.47033 * 30.21616 * 5 4 3 8 8 F 1.39898 * 109.47170 * 150.21333 * 5 4 3 9 9 C 1.39865 * 108.21864 * 0.43914 * 4 3 2 10 10 C 1.50703 * 126.05020 * 179.81850 * 9 4 3 11 11 N 1.46899 * 109.47107 * 269.71325 * 10 9 4 12 12 C 1.46904 * 111.00029 * 179.97438 * 11 10 9 13 13 C 1.52997 * 109.46950 * 180.02562 * 12 11 10 14 14 C 1.53003 * 109.47071 * 180.02562 * 13 12 11 15 15 C 1.50704 * 109.47153 * 179.97438 * 14 13 12 16 16 H 1.07997 * 119.99780 * 359.97438 * 15 14 13 17 17 C 1.37871 * 119.99793 * 180.02562 * 15 14 13 18 18 N 1.31521 * 120.00052 * 0.02562 * 17 15 14 19 19 Si 1.86797 * 120.00014 * 179.97438 * 17 15 14 20 20 H 1.48505 * 109.47121 * 60.00049 * 19 17 15 21 21 H 1.48506 * 109.47165 * 179.97438 * 19 17 15 22 22 H 1.48500 * 109.47240 * 300.00130 * 19 17 15 23 23 C 1.34987 * 126.03962 * 180.02562 * 2 1 3 24 24 Cl 1.73595 * 126.14065 * 359.94470 * 23 2 1 25 25 H 1.09001 * 109.46612 * 269.95763 * 1 2 3 26 26 H 1.08995 * 109.47202 * 29.95768 * 1 2 3 27 27 H 1.08997 * 109.46707 * 149.96202 * 1 2 3 28 28 H 1.09002 * 109.47152 * 149.71412 * 10 9 4 29 29 H 1.09001 * 109.46980 * 29.71513 * 10 9 4 30 30 H 1.00902 * 111.00582 * 303.95889 * 11 10 9 31 31 H 1.08995 * 109.47167 * 300.00240 * 12 11 10 32 32 H 1.09003 * 109.46442 * 60.00214 * 12 11 10 33 33 H 1.09005 * 109.47424 * 300.00229 * 13 12 11 34 34 H 1.09004 * 109.47266 * 59.99979 * 13 12 11 35 35 H 1.08995 * 109.47051 * 300.00167 * 14 13 12 36 36 H 1.09003 * 109.46901 * 60.00330 * 14 13 12 37 37 H 0.97005 * 119.99618 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2891 1.1328 0.0000 4 6 3.5347 0.7329 0.0053 5 6 4.7491 1.6253 0.0127 6 9 5.1283 1.9078 -1.3040 7 9 4.4467 2.8188 0.6771 8 9 5.7996 0.9779 0.6719 9 6 3.5451 -0.6657 -0.0013 10 6 4.7700 -1.5435 -0.0023 11 7 5.1676 -1.8278 -1.3876 12 6 6.3616 -2.6827 -1.4277 13 6 6.7447 -2.9557 -2.8836 14 6 7.9878 -3.8466 -2.9254 15 6 8.3648 -4.1160 -4.3595 16 1 7.7762 -3.6944 -5.1608 17 6 9.4603 -4.9016 -4.6483 18 7 10.1761 -5.4163 -3.6724 19 14 9.9271 -5.2362 -6.4258 20 1 10.2161 -3.9513 -7.1120 21 1 11.1338 -6.1008 -6.4664 22 1 8.8029 -5.9220 -7.1122 23 6 2.2592 -1.0915 -0.0005 24 17 1.7279 -2.7442 0.0001 25 1 -0.3632 -0.0008 1.0277 26 1 -0.3633 0.8903 -0.5131 27 1 -0.3633 -0.8896 -0.5144 28 1 4.5471 -2.4789 0.5110 29 1 5.5839 -1.0321 0.5117 30 1 4.4072 -2.2437 -1.9040 31 1 7.1864 -2.1788 -0.9238 32 1 6.1500 -3.6260 -0.9242 33 1 5.9200 -3.4594 -3.3880 34 1 6.9563 -2.0121 -3.3867 35 1 8.8126 -3.3433 -2.4210 36 1 7.7757 -4.7901 -2.4225 37 1 10.9471 -5.9688 -3.8757 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000272934731.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:22:01 Heat of formation + Delta-G solvation = -84.923118 kcal Electronic energy + Delta-G solvation = -25190.109645 eV Core-core repulsion = 20808.074266 eV Total energy + Delta-G solvation = -4382.035380 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 325.086 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -50.26200 -47.82158 -47.70693 -42.04367 -37.44105 -36.59372 -34.44306 -33.43874 -31.82245 -30.28413 -28.89609 -26.95041 -25.52724 -24.00875 -22.20365 -21.64844 -21.18986 -20.05873 -18.62841 -18.38431 -18.30237 -16.87055 -16.43323 -16.23593 -15.69035 -14.99889 -14.68675 -14.60989 -14.49942 -14.44551 -14.21413 -14.08270 -13.88459 -13.86306 -13.56630 -13.36641 -13.14313 -12.72526 -12.57789 -12.32717 -12.11384 -11.72133 -11.61112 -11.41769 -11.20894 -10.77386 -10.53057 -10.49946 -10.07616 -9.63678 -9.38676 -9.10838 -8.96646 -8.29302 -8.15601 -5.94821 -3.96632 0.82676 0.87689 1.65544 1.69071 2.56991 3.36776 3.37264 3.41180 3.44185 3.70567 4.17552 4.23089 4.46404 4.49504 4.56040 4.56268 4.80191 4.85698 4.90873 5.39443 5.40984 5.57165 5.73060 5.85832 5.94412 6.01993 6.37260 6.66213 6.76817 6.79856 7.19182 7.32906 7.61651 7.74066 7.89731 8.06069 8.49416 9.10450 9.67047 11.16614 Molecular weight = 325.09amu Principal moments of inertia in cm(-1) A = 0.014668 B = 0.002925 C = 0.002603 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1908.496729 B = 9571.593751 C =10754.168118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.092 3.908 2 N -0.347 5.347 3 N -0.217 5.217 4 C 0.007 3.993 5 C 0.561 3.439 6 F -0.157 7.157 7 F -0.171 7.171 8 F -0.158 7.158 9 C -0.157 4.157 10 C 0.114 3.886 11 N -0.683 5.683 12 C 0.060 3.940 13 C -0.107 4.107 14 C 0.023 3.977 15 C -0.518 4.518 16 H 0.054 0.946 17 C 0.056 3.944 18 N -0.897 5.897 19 Si 0.892 3.108 20 H -0.277 1.277 21 H -0.288 1.288 22 H -0.277 1.277 23 C 0.126 3.874 24 Cl 0.017 6.983 25 H 0.087 0.913 26 H 0.102 0.898 27 H 0.096 0.904 28 H 0.046 0.954 29 H 0.098 0.902 30 H 0.337 0.663 31 H 0.070 0.930 32 H 0.026 0.974 33 H 0.044 0.956 34 H 0.057 0.943 35 H 0.017 0.983 36 H 0.013 0.987 37 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.817 11.691 12.413 27.690 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.132 5.132 3 N -0.042 5.042 4 C -0.159 4.159 5 C 0.504 3.496 6 F -0.138 7.138 7 F -0.152 7.152 8 F -0.139 7.139 9 C -0.169 4.169 10 C -0.016 4.016 11 N -0.314 5.314 12 C -0.068 4.068 13 C -0.145 4.145 14 C -0.015 4.015 15 C -0.557 4.557 16 H 0.073 0.927 17 C -0.145 4.145 18 N -0.537 5.537 19 Si 0.720 3.280 20 H -0.202 1.202 21 H -0.213 1.213 22 H -0.203 1.203 23 C -0.028 4.028 24 Cl 0.045 6.955 25 H 0.105 0.895 26 H 0.120 0.880 27 H 0.115 0.885 28 H 0.064 0.936 29 H 0.116 0.884 30 H 0.154 0.846 31 H 0.089 0.911 32 H 0.045 0.955 33 H 0.063 0.937 34 H 0.076 0.924 35 H 0.035 0.965 36 H 0.032 0.968 37 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -22.259 13.018 12.382 28.605 hybrid contribution 0.325 -1.838 -0.715 1.999 sum -21.934 11.180 11.667 27.244 Atomic orbital electron populations 1.22159 0.72325 1.05762 1.04596 1.48604 1.07305 1.01766 1.55556 1.77498 0.99798 1.05958 1.20978 1.21811 0.93010 0.93738 1.07383 1.16717 0.80893 0.77266 0.74692 1.93297 1.91784 1.93557 1.35200 1.93231 1.93110 1.47956 1.80884 1.93195 1.58821 1.80924 1.80978 1.19428 0.93687 0.92076 1.11751 1.20558 0.92613 0.96326 0.92101 1.60605 1.08589 1.51251 1.10977 1.22151 0.91328 0.93539 0.99795 1.21623 0.99784 1.00545 0.92520 1.19059 0.91482 0.94040 0.96916 1.21230 1.11564 1.30344 0.92548 0.92739 1.25022 0.96443 0.95958 0.97079 1.69961 1.18218 1.34157 1.31318 0.86666 0.77786 0.78223 0.85365 1.20212 1.21347 1.20313 1.21445 0.90560 0.83940 1.06816 1.98446 1.90245 1.09967 1.96846 0.89464 0.87962 0.88537 0.93638 0.88394 0.84583 0.91130 0.95536 0.93720 0.92446 0.96496 0.96819 0.93019 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.43 11.31 59.85 0.68 1.11 16 2 N -0.35 -3.29 4.01 -64.91 -0.26 -3.55 16 3 N -0.22 -2.59 12.51 33.67 0.42 -2.17 16 4 C 0.01 0.09 6.56 -82.41 -0.54 -0.45 16 5 C 0.56 7.13 3.50 36.01 0.13 7.26 16 6 F -0.16 -2.20 17.30 2.25 0.04 -2.16 16 7 F -0.17 -2.08 17.25 2.25 0.04 -2.04 16 8 F -0.16 -2.01 14.67 2.25 0.03 -1.98 16 9 C -0.16 -1.89 5.57 -105.00 -0.59 -2.48 16 10 C 0.11 1.44 5.72 -4.98 -0.03 1.42 16 11 N -0.68 -10.15 6.49 -115.05 -0.75 -10.89 16 12 C 0.06 1.03 5.69 -3.82 -0.02 1.01 16 13 C -0.11 -2.23 5.41 -26.73 -0.14 -2.38 16 14 C 0.02 0.59 4.97 -27.88 -0.14 0.45 16 15 C -0.52 -14.95 9.11 -34.44 -0.31 -15.26 16 16 H 0.05 1.53 7.74 -52.49 -0.41 1.12 16 17 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 18 N -0.90 -27.31 13.29 55.43 0.74 -26.57 16 19 Si 0.89 21.98 29.54 -169.99 -5.02 16.96 16 20 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 21 H -0.29 -7.00 7.11 56.52 0.40 -6.60 16 22 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 23 C 0.13 1.29 7.45 -17.16 -0.13 1.17 16 24 Cl 0.02 0.14 28.34 -51.86 -1.47 -1.33 16 25 H 0.09 0.27 8.14 -51.93 -0.42 -0.16 16 26 H 0.10 0.37 8.14 -51.93 -0.42 -0.05 16 27 H 0.10 0.31 7.81 -51.93 -0.41 -0.10 16 28 H 0.05 0.54 7.91 -51.93 -0.41 0.13 16 29 H 0.10 1.27 5.76 -51.93 -0.30 0.97 16 30 H 0.34 4.78 8.72 -39.29 -0.34 4.43 16 31 H 0.07 1.24 8.14 -51.93 -0.42 0.82 16 32 H 0.03 0.45 8.14 -51.93 -0.42 0.02 16 33 H 0.04 0.91 8.14 -51.93 -0.42 0.49 16 34 H 0.06 1.24 8.14 -51.93 -0.42 0.81 16 35 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 36 H 0.01 0.37 8.14 -51.93 -0.42 -0.05 16 37 H 0.26 7.48 8.31 -40.82 -0.34 7.14 16 LS Contribution 346.85 15.07 5.23 5.23 Total: -1.00 -32.14 346.85 -6.58 -38.72 By element: Atomic # 1 Polarization: 0.79 SS G_CDS: -4.38 Total: -3.59 kcal Atomic # 6 Polarization: -5.43 SS G_CDS: -1.20 Total: -6.62 kcal Atomic # 7 Polarization: -43.33 SS G_CDS: 0.15 Total: -43.18 kcal Atomic # 9 Polarization: -6.29 SS G_CDS: 0.11 Total: -6.18 kcal Atomic # 14 Polarization: 21.98 SS G_CDS: -5.02 Total: 16.96 kcal Atomic # 17 Polarization: 0.14 SS G_CDS: -1.47 Total: -1.33 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -32.14 -6.58 -38.72 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000272934731.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.208 kcal (2) G-P(sol) polarization free energy of solvation -32.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.344 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.715 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds