Wall clock time and date at job start Tue Mar 31 2020 14:19:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.35630 * 125.67781 * 2 1 4 4 C 1.35512 * 108.85132 * 180.29365 * 3 2 1 5 5 Cl 1.73606 * 126.07210 * 179.71594 * 4 3 2 6 6 C 1.39880 * 107.85436 * 359.73266 * 4 3 2 7 7 C 1.37631 * 125.67498 * 179.83593 * 2 1 3 8 8 C 1.46669 * 126.22715 * 359.97143 * 7 2 1 9 9 O 1.21701 * 119.99540 * 351.34422 * 8 7 2 10 10 N 1.34775 * 120.00248 * 171.34235 * 8 7 2 11 11 C 1.48380 * 127.17180 * 353.03029 * 10 8 7 12 12 C 1.54941 * 103.37366 * 219.23048 * 11 10 8 13 13 H 1.09003 * 110.90082 * 81.12894 * 12 11 10 14 14 N 1.46506 * 110.74245 * 204.38556 * 12 11 10 15 15 C 1.36930 * 119.99875 * 268.42043 * 14 12 11 16 16 H 1.08004 * 120.00378 * 359.97438 * 15 14 12 17 17 C 1.38816 * 119.99859 * 179.97438 * 15 14 12 18 18 N 1.31615 * 119.99860 * 359.97438 * 17 15 14 19 19 Si 1.86801 * 119.99890 * 179.97438 * 17 15 14 20 20 H 1.48504 * 109.47078 * 359.97438 * 19 17 15 21 21 H 1.48494 * 109.47077 * 119.99798 * 19 17 15 22 22 H 1.48501 * 109.46680 * 239.99868 * 19 17 15 23 23 C 1.54618 * 102.83658 * 322.72166 * 12 11 10 24 24 C 1.52998 * 110.32949 * 262.95687 * 23 12 11 25 25 C 1.53006 * 110.41305 * 140.78688 * 23 12 11 26 26 C 1.47489 * 127.03213 * 173.22240 * 10 8 7 27 27 H 1.08999 * 109.47218 * 264.69941 * 1 2 3 28 28 H 1.09003 * 109.47629 * 24.69748 * 1 2 3 29 29 H 1.09000 * 109.47501 * 144.69819 * 1 2 3 30 30 H 1.08011 * 125.57186 * 359.97438 * 3 2 1 31 31 H 1.07996 * 126.45759 * 179.97438 * 6 4 3 32 32 H 1.08994 * 110.52285 * 100.78947 * 11 10 8 33 33 H 1.09001 * 110.83294 * 337.81542 * 11 10 8 34 34 H 0.96997 * 119.99389 * 88.41362 * 14 12 11 35 35 H 0.96999 * 119.99897 * 180.02562 * 18 17 15 36 36 H 1.08994 * 109.47510 * 177.07574 * 24 23 12 37 37 H 1.08996 * 109.47129 * 297.07635 * 24 23 12 38 38 H 1.09005 * 109.47116 * 57.07098 * 24 23 12 39 39 H 1.08992 * 109.46893 * 302.87156 * 25 23 12 40 40 H 1.08997 * 109.47084 * 62.87858 * 25 23 12 41 41 H 1.09005 * 109.46958 * 182.87463 * 25 23 12 42 42 H 1.08995 * 109.91435 * 35.16448 * 26 10 8 43 43 H 1.08998 * 109.91529 * 274.07561 * 26 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2560 1.1017 0.0000 4 6 3.5531 0.7095 -0.0066 5 17 4.9377 1.7567 -0.0162 6 6 3.5782 -0.6891 -0.0046 7 6 2.2676 -1.1180 0.0032 8 6 1.8120 -2.5122 0.0078 9 8 0.6326 -2.7663 0.1677 10 7 2.6993 -3.5117 -0.1651 11 6 4.1362 -3.3848 -0.5131 12 6 4.3694 -4.5528 -1.5041 13 1 4.0378 -4.2839 -2.5071 14 7 5.7795 -4.9502 -1.5152 15 6 6.6444 -4.3800 -2.4105 16 1 6.2872 -3.6377 -3.1089 17 6 7.9806 -4.7562 -2.4206 18 7 8.4162 -5.6605 -1.5693 19 14 9.1605 -3.9789 -3.6426 20 1 8.4274 -2.9989 -4.4838 21 1 10.2483 -3.2850 -2.9075 22 1 9.7435 -5.0353 -4.5082 23 6 3.4874 -5.6804 -0.9198 24 6 4.3313 -6.6245 -0.0612 25 6 2.8003 -6.4576 -2.0446 26 6 2.4402 -4.9592 -0.0509 27 1 -0.3633 -0.0949 1.0233 28 1 -0.3634 0.9337 -0.4294 29 1 -0.3634 -0.8387 -0.5939 30 1 1.9088 2.1245 -0.0004 31 1 4.4582 -1.3152 -0.0090 32 1 4.7565 -3.5044 0.3751 33 1 4.3355 -2.4270 -0.9939 34 1 6.1002 -5.6171 -0.8881 35 1 9.3499 -5.9230 -1.5761 36 1 3.6878 -7.3827 0.3850 37 1 5.0836 -7.1077 -0.6846 38 1 4.8238 -6.0558 0.7275 39 1 2.2131 -5.7711 -2.6544 40 1 3.5545 -6.9410 -2.6655 41 1 2.1439 -7.2144 -1.6149 42 1 1.4375 -5.1865 -0.4125 43 1 2.5401 -5.2734 0.9881 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000996026281.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:19:35 Heat of formation + Delta-G solvation = 38.514677 kcal Electronic energy + Delta-G solvation = -26129.491362 eV Core-core repulsion = 22430.498482 eV Total energy + Delta-G solvation = -3698.992880 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 325.130 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.57038 -39.69678 -37.80165 -36.36416 -34.31925 -33.48637 -32.56037 -30.85209 -29.62432 -27.69911 -27.02089 -26.56986 -26.05828 -24.02254 -22.51412 -21.16523 -20.76868 -19.26203 -18.51634 -17.34890 -17.05694 -16.27258 -15.97232 -15.31593 -15.27418 -14.49686 -14.20323 -14.13924 -13.87711 -13.73731 -13.56358 -13.24350 -13.02265 -12.92013 -12.77084 -12.70664 -12.41829 -11.88930 -11.69342 -11.50255 -11.44030 -11.21890 -10.98772 -10.94082 -10.84873 -10.54174 -10.43527 -10.15547 -9.91273 -9.87360 -9.66448 -9.03426 -8.71009 -8.55857 -8.22229 -7.06089 -5.85098 -3.14878 1.37384 2.07173 2.40600 2.67356 3.35165 3.38238 3.40729 3.47857 3.48866 4.48107 4.58051 4.65684 4.75393 4.98623 5.05235 5.07177 5.15525 5.18612 5.37314 5.47703 5.58342 5.62137 5.66828 5.77208 5.79589 5.90208 5.98503 6.04592 6.15019 6.20504 6.24580 6.30295 6.38655 6.44436 6.54149 6.61491 6.69838 6.75426 6.90604 6.92930 7.65691 7.70099 8.22897 8.33513 9.45976 9.99326 10.34648 11.37076 Molecular weight = 325.13amu Principal moments of inertia in cm(-1) A = 0.009840 B = 0.004783 C = 0.003399 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2844.821787 B = 5853.034625 C = 8234.805431 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.407 5.407 3 C 0.026 3.974 4 C -0.121 4.121 5 Cl -0.050 7.050 6 C -0.134 4.134 7 C -0.030 4.030 8 C 0.605 3.395 9 O -0.562 6.562 10 N -0.601 5.601 11 C 0.058 3.942 12 C 0.179 3.821 13 H 0.067 0.933 14 N -0.711 5.711 15 C -0.247 4.247 16 H 0.072 0.928 17 C -0.006 4.006 18 N -0.930 5.930 19 Si 0.905 3.095 20 H -0.279 1.279 21 H -0.291 1.291 22 H -0.292 1.292 23 C -0.089 4.089 24 C -0.135 4.135 25 C -0.130 4.130 26 C 0.122 3.878 27 H 0.079 0.921 28 H 0.084 0.916 29 H 0.098 0.902 30 H 0.176 0.824 31 H 0.171 0.829 32 H 0.077 0.923 33 H 0.091 0.909 34 H 0.391 0.609 35 H 0.256 0.744 36 H 0.047 0.953 37 H 0.076 0.924 38 H 0.058 0.942 39 H 0.051 0.949 40 H 0.064 0.936 41 H 0.050 0.950 42 H 0.074 0.926 43 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.442 8.992 4.168 17.516 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 N -0.080 5.080 3 C -0.110 4.110 4 C -0.155 4.155 5 Cl -0.021 7.021 6 C -0.160 4.160 7 C -0.143 4.143 8 C 0.394 3.606 9 O -0.444 6.444 10 N -0.333 5.333 11 C -0.067 4.067 12 C 0.067 3.933 13 H 0.084 0.916 14 N -0.354 5.354 15 C -0.378 4.378 16 H 0.090 0.910 17 C -0.203 4.203 18 N -0.577 5.577 19 Si 0.736 3.264 20 H -0.204 1.204 21 H -0.218 1.218 22 H -0.219 1.219 23 C -0.090 4.090 24 C -0.193 4.193 25 C -0.188 4.188 26 C -0.001 4.001 27 H 0.097 0.903 28 H 0.103 0.897 29 H 0.117 0.883 30 H 0.193 0.807 31 H 0.188 0.812 32 H 0.095 0.905 33 H 0.109 0.891 34 H 0.229 0.771 35 H 0.066 0.934 36 H 0.066 0.934 37 H 0.094 0.906 38 H 0.077 0.923 39 H 0.070 0.930 40 H 0.083 0.917 41 H 0.069 0.931 42 H 0.092 0.908 43 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -15.285 9.041 4.119 18.231 hybrid contribution 1.057 0.503 -0.353 1.222 sum -14.229 9.544 3.766 17.542 Atomic orbital electron populations 1.22220 0.75383 1.04631 1.04405 1.43727 1.06949 1.04522 1.52836 1.21663 0.89001 0.91972 1.08399 1.19967 0.87963 0.91589 1.15935 1.98330 1.40689 1.65437 1.97656 1.21996 0.96289 0.93374 1.04295 1.19951 0.89562 0.87827 1.16969 1.16383 0.84465 0.82610 0.77101 1.90764 1.16145 1.84562 1.52905 1.48414 1.11405 1.05957 1.67528 1.24281 0.78499 1.03355 1.00589 1.21275 0.86300 0.89965 0.95802 0.91551 1.42592 1.02124 1.48554 1.42089 1.19311 0.89615 1.17866 1.10988 0.90981 1.24721 0.97133 0.99192 0.99255 1.69656 1.15273 1.34191 1.38612 0.86154 0.81261 0.78433 0.80560 1.20432 1.21762 1.21873 1.21742 0.95168 0.96423 0.95699 1.21754 0.99618 0.98374 0.99542 1.21789 1.00010 0.99383 0.97611 1.22187 0.99476 0.78687 0.99741 0.90258 0.89746 0.88304 0.80651 0.81178 0.90480 0.89148 0.77140 0.93419 0.93357 0.90554 0.92334 0.93020 0.91656 0.93135 0.90769 0.91622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.68 10.34 59.84 0.62 1.30 16 2 N -0.41 -5.00 3.16 -120.19 -0.38 -5.39 16 3 C 0.03 0.29 11.35 -16.85 -0.19 0.10 16 4 C -0.12 -1.62 6.66 -39.94 -0.27 -1.88 16 5 Cl -0.05 -0.64 29.30 -51.86 -1.52 -2.16 16 6 C -0.13 -1.97 9.16 -39.09 -0.36 -2.33 16 7 C -0.03 -0.44 6.82 -81.98 -0.56 -1.00 16 8 C 0.60 9.90 7.83 -12.86 -0.10 9.79 16 9 O -0.56 -9.98 15.25 5.19 0.08 -9.90 16 10 N -0.60 -9.55 3.30 -171.09 -0.57 -10.11 16 11 C 0.06 0.97 5.27 -1.98 -0.01 0.96 16 12 C 0.18 3.29 3.16 -66.05 -0.21 3.08 16 13 H 0.07 1.28 7.81 -51.93 -0.41 0.88 16 14 N -0.71 -16.11 4.97 -51.61 -0.26 -16.36 16 15 C -0.25 -6.36 9.96 -15.06 -0.15 -6.51 16 16 H 0.07 1.83 7.83 -52.48 -0.41 1.42 16 17 C -0.01 -0.18 5.50 -17.43 -0.10 -0.27 16 18 N -0.93 -26.50 13.06 55.49 0.72 -25.78 16 19 Si 0.90 21.55 29.55 -169.99 -5.02 16.53 16 20 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 21 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 22 H -0.29 -7.03 7.11 56.52 0.40 -6.63 16 23 C -0.09 -1.36 0.95 -153.13 -0.15 -1.51 16 24 C -0.14 -2.08 7.02 37.16 0.26 -1.82 16 25 C -0.13 -1.85 8.23 37.16 0.31 -1.54 16 26 C 0.12 1.80 6.31 -2.98 -0.02 1.78 16 27 H 0.08 0.68 8.14 -51.93 -0.42 0.26 16 28 H 0.08 0.50 8.12 -51.93 -0.42 0.08 16 29 H 0.10 1.06 6.86 -51.93 -0.36 0.70 16 30 H 0.18 1.34 8.06 -52.48 -0.42 0.92 16 31 H 0.17 2.59 5.03 -52.49 -0.26 2.33 16 32 H 0.08 1.34 8.14 -51.93 -0.42 0.91 16 33 H 0.09 1.52 5.01 -51.93 -0.26 1.26 16 34 H 0.39 9.28 5.13 -40.82 -0.21 9.07 16 35 H 0.26 7.12 8.31 -40.82 -0.34 6.78 16 36 H 0.05 0.63 8.14 -51.93 -0.42 0.20 16 37 H 0.08 1.35 7.00 -51.93 -0.36 0.99 16 38 H 0.06 0.93 7.95 -51.93 -0.41 0.52 16 39 H 0.05 0.72 8.14 -51.93 -0.42 0.29 16 40 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 41 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 42 H 0.07 1.08 7.54 -51.93 -0.39 0.69 16 43 H 0.07 0.92 7.68 -51.93 -0.40 0.52 16 LS Contribution 359.64 15.07 5.42 5.42 Total: -1.00 -29.90 359.64 -8.43 -38.33 By element: Atomic # 1 Polarization: 15.27 SS G_CDS: -5.99 Total: 9.28 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -0.92 Total: 0.14 kcal Atomic # 7 Polarization: -57.16 SS G_CDS: -0.48 Total: -57.64 kcal Atomic # 8 Polarization: -9.98 SS G_CDS: 0.08 Total: -9.90 kcal Atomic # 14 Polarization: 21.55 SS G_CDS: -5.02 Total: 16.53 kcal Atomic # 17 Polarization: -0.64 SS G_CDS: -1.52 Total: -2.16 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -29.90 -8.43 -38.33 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000996026281.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.846 kcal (2) G-P(sol) polarization free energy of solvation -29.901 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.331 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds