Wall clock time and date at job start Tue Mar 31 2020 13:58:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53002 * 109.47164 * 2 1 4 4 H 1.08994 * 109.47171 * 54.99743 * 3 2 1 5 5 C 1.53005 * 109.46975 * 294.99891 * 3 2 1 6 6 C 1.53000 * 109.47349 * 174.99927 * 3 2 1 7 7 H 1.08994 * 109.47081 * 179.97438 * 6 3 2 8 8 N 1.46898 * 109.47140 * 300.00081 * 6 3 2 9 9 C 1.46906 * 110.99888 * 275.00023 * 8 6 3 10 10 C 1.52993 * 109.47378 * 180.02562 * 9 8 6 11 11 O 1.42903 * 109.47204 * 64.99537 * 10 9 8 12 12 C 1.42903 * 113.99770 * 180.02562 * 11 10 9 13 13 C 1.50705 * 109.46830 * 180.02562 * 12 11 10 14 14 H 1.07999 * 119.99830 * 359.97438 * 13 12 11 15 15 C 1.37879 * 119.99810 * 179.97438 * 13 12 11 16 16 N 1.31509 * 119.99856 * 359.97438 * 15 13 12 17 17 Si 1.86797 * 119.99786 * 179.97438 * 15 13 12 18 18 H 1.48498 * 109.47473 * 59.99869 * 17 15 13 19 19 H 1.48493 * 109.47225 * 180.02562 * 17 15 13 20 20 H 1.48508 * 109.47052 * 300.00145 * 17 15 13 21 21 C 1.50696 * 109.46951 * 59.99852 * 6 3 2 22 22 C 1.38241 * 119.99074 * 279.72470 * 21 6 3 23 23 C 1.38216 * 120.01485 * 179.72850 * 22 21 6 24 24 C 1.38342 * 119.98559 * 0.54598 * 23 22 21 25 25 Cl 1.73605 * 120.01282 * 179.70606 * 24 23 22 26 26 C 1.38354 * 119.97652 * 359.73144 * 24 23 22 27 27 C 1.38211 * 119.98430 * 359.97438 * 26 24 23 28 28 H 1.09002 * 109.47478 * 60.00506 * 1 2 3 29 29 H 1.09005 * 109.47244 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47415 * 299.99994 * 1 2 3 31 31 H 1.09000 * 109.47415 * 240.00006 * 2 1 3 32 32 H 1.09002 * 109.47478 * 119.99494 * 2 1 3 33 33 H 1.09003 * 109.47087 * 300.00148 * 5 3 2 34 34 H 1.09003 * 109.46716 * 59.99937 * 5 3 2 35 35 H 1.09000 * 109.47056 * 179.97438 * 5 3 2 36 36 H 1.00901 * 111.00121 * 151.04609 * 8 6 3 37 37 H 1.09004 * 109.47040 * 299.99934 * 9 8 6 38 38 H 1.09000 * 109.47033 * 59.99886 * 9 8 6 39 39 H 1.08997 * 109.47645 * 185.00377 * 10 9 8 40 40 H 1.09005 * 109.46770 * 304.99958 * 10 9 8 41 41 H 1.08997 * 109.47226 * 299.99656 * 12 11 10 42 42 H 1.08996 * 109.47063 * 60.00397 * 12 11 10 43 43 H 0.97004 * 119.99704 * 179.97438 * 16 15 13 44 44 H 1.08005 * 119.99060 * 0.02562 * 22 21 6 45 45 H 1.08007 * 120.00057 * 180.27450 * 23 22 21 46 46 H 1.08000 * 120.00733 * 179.97438 * 26 24 23 47 47 H 1.08001 * 119.99145 * 180.02562 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 1.6053 1.9815 0.8417 5 6 1.6352 2.1265 -1.3074 6 6 3.5648 1.4444 0.1257 7 1 3.9281 2.4720 0.1253 8 7 3.9534 0.7876 1.3809 9 6 3.9227 1.7358 2.5026 10 6 4.3330 1.0170 3.7894 11 8 5.6949 0.5967 3.6867 12 6 6.1801 -0.0895 4.8425 13 6 7.6184 -0.4839 4.6257 14 1 8.1123 -0.2357 3.6979 15 6 8.3035 -1.1615 5.6118 16 7 7.7021 -1.4632 6.7417 17 14 10.0861 -1.6509 5.3428 18 1 10.9039 -0.4336 5.1094 19 1 10.5903 -2.3639 6.5438 20 1 10.1809 -2.5450 4.1607 21 6 4.1656 0.6991 -1.0381 22 6 4.2062 -0.6826 -1.0271 23 6 4.7521 -1.3669 -2.0967 24 6 5.2682 -0.6683 -3.1735 25 17 5.9610 -1.5268 -4.5140 26 6 5.2326 0.7147 -3.1815 27 6 4.6810 1.3977 -2.1140 28 1 -0.3634 0.5137 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 1.8933 -0.5138 -0.8900 32 1 1.8933 -0.5137 0.8900 33 1 2.0698 1.5874 -2.1492 34 1 0.5488 2.1252 -1.3969 35 1 1.9981 3.1543 -1.3072 36 1 4.8615 0.3559 1.2971 37 1 4.6166 2.5533 2.3065 38 1 2.9143 2.1341 2.6142 39 1 4.2250 1.6960 4.6352 40 1 3.6943 0.1464 3.9386 41 1 6.1105 0.5663 5.7104 42 1 5.5797 -0.9831 5.0132 43 1 8.1841 -1.9403 7.4353 44 1 3.8069 -1.2278 -0.1845 45 1 4.7797 -2.4466 -2.0898 46 1 5.6358 1.2606 -4.0217 47 1 4.6527 2.4773 -2.1204 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000339070909.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:58:49 Heat of formation + Delta-G solvation = -51.649230 kcal Electronic energy + Delta-G solvation = -25487.113652 eV Core-core repulsion = 21887.751315 eV Total energy + Delta-G solvation = -3599.362337 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 325.155 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -40.19344 -37.78378 -36.81060 -36.27674 -34.32553 -32.70528 -31.59577 -31.19434 -29.52938 -28.57195 -26.79313 -25.14920 -23.91825 -22.89064 -22.33712 -21.55442 -21.29769 -19.40261 -17.17816 -16.47114 -16.08227 -15.89167 -15.60252 -15.38790 -14.90698 -14.71123 -14.51364 -14.40019 -14.02317 -13.68839 -13.46576 -13.23549 -13.16391 -13.11532 -12.37144 -12.19920 -12.13803 -11.87084 -11.72807 -11.58091 -11.54649 -11.43987 -11.27057 -10.92292 -10.83781 -10.82951 -10.69787 -10.57778 -10.46887 -10.35163 -10.02192 -9.12762 -9.12010 -8.83333 -8.66850 -8.27303 -8.18061 -6.11412 -4.13306 0.99573 1.17910 1.99746 3.31804 3.34701 3.38423 3.48653 4.18213 4.34380 4.48909 4.68359 4.76435 4.84406 4.88615 4.96230 5.11347 5.22305 5.24870 5.25162 5.39837 5.43823 5.47813 5.49209 5.54805 5.58002 5.68587 5.72110 5.83685 5.88138 5.95907 6.01662 6.04393 6.08528 6.12040 6.14583 6.19828 6.30589 6.36671 6.42133 6.49834 6.68073 7.09818 7.17295 7.42816 7.58669 7.78107 8.14564 8.56587 8.99465 9.51663 11.00025 Molecular weight = 325.15amu Principal moments of inertia in cm(-1) A = 0.009185 B = 0.003344 C = 0.002633 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3047.554021 B = 8371.845037 C =10630.802155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.118 4.118 3 C -0.074 4.074 4 H 0.072 0.928 5 C -0.151 4.151 6 C 0.128 3.872 7 H 0.051 0.949 8 N -0.678 5.678 9 C 0.067 3.933 10 C 0.062 3.938 11 O -0.399 6.399 12 C 0.199 3.801 13 C -0.516 4.516 14 H 0.065 0.935 15 C 0.057 3.943 16 N -0.898 5.898 17 Si 0.907 3.093 18 H -0.275 1.275 19 H -0.286 1.286 20 H -0.274 1.274 21 C -0.074 4.074 22 C -0.084 4.084 23 C -0.112 4.112 24 C -0.036 4.036 25 Cl -0.079 7.079 26 C -0.114 4.114 27 C -0.102 4.102 28 H 0.049 0.951 29 H 0.049 0.951 30 H 0.050 0.950 31 H 0.060 0.940 32 H 0.081 0.919 33 H 0.056 0.944 34 H 0.056 0.944 35 H 0.050 0.950 36 H 0.359 0.641 37 H 0.034 0.966 38 H 0.075 0.925 39 H 0.040 0.960 40 H 0.046 0.954 41 H 0.003 0.997 42 H 0.006 0.994 43 H 0.264 0.736 44 H 0.144 0.856 45 H 0.132 0.868 46 H 0.130 0.870 47 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.843 5.423 -19.596 24.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.155 4.155 3 C -0.093 4.093 4 H 0.090 0.910 5 C -0.209 4.209 6 C 0.018 3.982 7 H 0.069 0.931 8 N -0.311 5.311 9 C -0.063 4.063 10 C -0.016 4.016 11 O -0.319 6.319 12 C 0.124 3.876 13 C -0.554 4.554 14 H 0.083 0.917 15 C -0.144 4.144 16 N -0.537 5.537 17 Si 0.734 3.266 18 H -0.201 1.201 19 H -0.211 1.211 20 H -0.200 1.200 21 C -0.075 4.075 22 C -0.102 4.102 23 C -0.131 4.131 24 C -0.062 4.062 25 Cl -0.050 7.050 26 C -0.133 4.133 27 C -0.120 4.120 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.079 0.921 32 H 0.100 0.900 33 H 0.075 0.925 34 H 0.075 0.925 35 H 0.069 0.931 36 H 0.179 0.821 37 H 0.053 0.947 38 H 0.094 0.906 39 H 0.058 0.942 40 H 0.065 0.935 41 H 0.021 0.979 42 H 0.024 0.976 43 H 0.074 0.926 44 H 0.162 0.838 45 H 0.150 0.850 46 H 0.148 0.852 47 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -13.247 5.043 -19.549 24.147 hybrid contribution 1.648 0.136 -0.034 1.654 sum -11.599 5.180 -19.583 23.342 Atomic orbital electron populations 1.21835 0.96770 1.01170 1.01224 1.21626 0.94641 0.96205 1.03029 1.21076 0.93357 0.97160 0.97684 0.90999 1.21935 1.01270 1.00000 0.97665 1.20522 0.95062 0.95318 0.87257 0.93062 1.60566 1.36613 1.31937 1.02008 1.21998 0.99873 0.93708 0.90674 1.22280 0.86379 0.97681 0.95213 1.87791 1.23977 1.76854 1.43292 1.20155 0.94461 0.90450 0.82493 1.21012 0.95666 1.36393 1.02319 0.91707 1.24933 0.98956 0.95689 0.94812 1.69951 1.37269 1.40481 1.06050 0.86416 0.83832 0.78762 0.77592 1.20056 1.21143 1.19980 1.20000 0.97675 0.94091 0.95722 1.21184 0.97327 0.93772 0.97903 1.21116 0.98678 1.00615 0.92669 1.20938 1.01859 0.92573 0.90878 1.98364 1.83371 1.77402 1.45887 1.20955 1.00759 0.92053 0.99541 1.20978 0.98021 0.99960 0.93076 0.93176 0.93163 0.93073 0.92129 0.90047 0.92452 0.92459 0.93133 0.82051 0.94725 0.90636 0.94220 0.93541 0.97889 0.97649 0.92595 0.83784 0.84964 0.85239 0.85427 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.35 9.67 37.15 0.36 -0.99 16 2 C -0.12 -1.16 4.06 -26.73 -0.11 -1.27 16 3 C -0.07 -0.70 2.30 -90.62 -0.21 -0.91 16 4 H 0.07 0.71 7.45 -51.93 -0.39 0.33 16 5 C -0.15 -1.26 8.54 37.16 0.32 -0.94 16 6 C 0.13 1.39 2.12 -68.87 -0.15 1.24 16 7 H 0.05 0.56 7.66 -51.93 -0.40 0.16 16 8 N -0.68 -9.00 4.84 -107.96 -0.52 -9.52 16 9 C 0.07 0.93 5.90 -3.82 -0.02 0.91 16 10 C 0.06 1.11 6.28 37.15 0.23 1.35 16 11 O -0.40 -9.27 9.85 -35.23 -0.35 -9.62 16 12 C 0.20 5.39 5.69 36.01 0.20 5.59 16 13 C -0.52 -15.08 9.43 -34.44 -0.32 -15.41 16 14 H 0.06 1.88 7.81 -52.49 -0.41 1.47 16 15 C 0.06 1.65 5.46 -17.82 -0.10 1.56 16 16 N -0.90 -26.84 13.29 55.43 0.74 -26.11 16 17 Si 0.91 21.83 29.54 -169.99 -5.02 16.81 16 18 H -0.28 -6.51 7.11 56.52 0.40 -6.10 16 19 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 20 H -0.27 -6.49 7.11 56.52 0.40 -6.09 16 21 C -0.07 -0.80 3.56 -104.62 -0.37 -1.17 16 22 C -0.08 -0.94 6.86 -39.59 -0.27 -1.21 16 23 C -0.11 -1.23 9.83 -39.55 -0.39 -1.62 16 24 C -0.04 -0.39 6.32 -39.50 -0.25 -0.64 16 25 Cl -0.08 -0.83 28.96 -51.86 -1.50 -2.33 16 26 C -0.11 -1.15 9.83 -39.55 -0.39 -1.54 16 27 C -0.10 -1.01 8.70 -39.59 -0.34 -1.35 16 28 H 0.05 0.41 6.57 -51.93 -0.34 0.07 16 29 H 0.05 0.43 8.14 -51.93 -0.42 0.01 16 30 H 0.05 0.45 8.14 -51.93 -0.42 0.03 16 31 H 0.06 0.61 6.04 -51.93 -0.31 0.30 16 32 H 0.08 0.93 7.32 -51.93 -0.38 0.55 16 33 H 0.06 0.51 6.64 -51.93 -0.34 0.16 16 34 H 0.06 0.45 6.57 -51.93 -0.34 0.10 16 35 H 0.05 0.39 8.14 -51.93 -0.42 -0.03 16 36 H 0.36 5.58 7.54 -39.29 -0.30 5.28 16 37 H 0.03 0.50 8.06 -51.93 -0.42 0.08 16 38 H 0.08 0.89 7.44 -51.93 -0.39 0.51 16 39 H 0.04 0.69 8.14 -51.93 -0.42 0.26 16 40 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 41 H 0.00 0.09 8.14 -51.93 -0.42 -0.33 16 42 H 0.01 0.16 8.14 -51.93 -0.42 -0.26 16 43 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 44 H 0.14 1.65 6.85 -52.48 -0.36 1.29 16 45 H 0.13 1.30 8.06 -52.48 -0.42 0.88 16 46 H 0.13 1.08 8.06 -52.49 -0.42 0.66 16 47 H 0.13 1.05 8.04 -52.49 -0.42 0.63 16 LS Contribution 387.73 15.07 5.84 5.84 Total: -1.00 -29.87 387.73 -10.36 -40.23 By element: Atomic # 1 Polarization: 8.83 SS G_CDS: -7.74 Total: 1.10 kcal Atomic # 6 Polarization: -14.60 SS G_CDS: -1.81 Total: -16.41 kcal Atomic # 7 Polarization: -35.84 SS G_CDS: 0.21 Total: -35.63 kcal Atomic # 8 Polarization: -9.27 SS G_CDS: -0.35 Total: -9.62 kcal Atomic # 14 Polarization: 21.83 SS G_CDS: -5.02 Total: 16.81 kcal Atomic # 17 Polarization: -0.83 SS G_CDS: -1.50 Total: -2.33 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -29.87 -10.36 -40.23 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000339070909.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.418 kcal (2) G-P(sol) polarization free energy of solvation -29.873 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.358 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.231 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.649 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds