Wall clock time and date at job start Tue Mar 31 2020 17:56:23
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= -1
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 C 1.52998 * 1
3 3 N 1.46503 * 109.46898 * 2 1
4 4 C 1.34774 * 119.99780 * 92.85202 * 3 2 1
5 5 O 1.21610 * 119.99794 * 175.52999 * 4 3 2
6 6 C 1.47386 * 120.00403 * 355.53697 * 4 3 2
7 7 C 1.38061 * 126.41936 * 264.51345 * 6 4 3
8 8 C 1.50702 * 126.28611 * 359.97438 * 7 6 4
9 9 N 1.34236 * 107.43591 * 179.97438 * 7 6 4
10 10 H 0.96998 * 125.74008 * 180.02562 * 9 7 6
11 11 N 1.39934 * 108.52243 * 359.97438 * 9 7 6
12 12 C 1.30525 * 108.89500 * 359.74996 * 11 9 7
13 13 Cl 1.73596 * 126.00853 * 180.25861 * 12 11 9
14 14 C 1.46501 * 120.00012 * 273.12487 * 3 2 1
15 15 H 1.08997 * 110.63766 * 18.96564 * 14 3 2
16 16 C 1.55158 * 110.72137 * 255.62943 * 14 3 2
17 17 C 1.54908 * 101.58129 * 277.14109 * 16 14 3
18 18 N 1.47423 * 104.83180 * 322.98966 * 17 16 14
19 19 C 1.36940 * 125.64626 * 204.16746 * 18 17 16
20 20 H 1.08000 * 120.00092 * 333.93828 * 19 18 17
21 21 C 1.38813 * 119.99739 * 153.94264 * 19 18 17
22 22 N 1.31617 * 119.99860 * 158.97651 * 21 19 18
23 23 Si 1.86795 * 120.00261 * 338.97131 * 21 19 18
24 24 H 1.48509 * 109.47110 * 90.06890 * 23 21 19
25 25 H 1.48496 * 109.47459 * 210.06951 * 23 21 19
26 26 H 1.48506 * 109.47413 * 330.07042 * 23 21 19
27 27 C 1.47022 * 108.70417 * 24.12684 * 18 17 16
28 28 H 1.09000 * 109.47331 * 185.10097 * 1 2 3
29 29 H 1.09001 * 109.47124 * 305.10450 * 1 2 3
30 30 H 1.09001 * 109.47244 * 65.10378 * 1 2 3
31 31 H 1.08997 * 109.47226 * 240.00191 * 2 1 3
32 32 H 1.08994 * 109.47250 * 120.00260 * 2 1 3
33 33 H 1.09003 * 109.46979 * 95.15549 * 8 7 6
34 34 H 1.08997 * 109.47302 * 215.15537 * 8 7 6
35 35 H 1.08995 * 109.46514 * 335.15578 * 8 7 6
36 36 H 1.09007 * 111.00138 * 35.21695 * 16 14 3
37 37 H 1.09000 * 111.00319 * 159.05949 * 16 14 3
38 38 H 1.09005 * 110.35929 * 204.15184 * 17 16 14
39 39 H 1.09002 * 110.45955 * 81.87877 * 17 16 14
40 40 H 0.97004 * 120.00087 * 179.97438 * 22 21 19
41 41 H 1.08996 * 109.88538 * 239.52284 * 27 18 17
42 42 H 1.09003 * 109.87602 * 118.35838 * 27 18 17
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 6 1.5300 0.0000 0.0000
3 7 2.0183 1.3813 0.0000
4 6 2.2976 1.9972 1.1658
5 8 2.7794 3.1138 1.1633
6 6 2.0194 1.3175 2.4436
7 6 0.8863 1.4619 3.2191
8 6 -0.2961 2.3454 2.9148
9 7 1.0310 0.6708 4.2938
10 1 0.3880 0.5686 5.0128
11 7 2.2650 0.0174 4.2020
12 6 2.8598 0.3903 3.1016
13 17 4.4120 -0.1533 2.5459
14 6 2.1972 2.0949 -1.2668
15 1 1.6288 1.6135 -2.0626
16 6 3.7009 2.1853 -1.6384
17 6 4.1535 3.4115 -0.8069
18 7 3.0128 4.3439 -0.8579
19 6 3.0830 5.7009 -0.6882
20 1 3.8848 6.1316 -0.1067
21 6 2.1237 6.5229 -1.2635
22 7 1.9279 7.7359 -0.7917
23 14 1.1108 5.9075 -2.7073
24 1 -0.1192 5.2456 -2.2027
25 1 0.7361 7.0540 -3.5735
26 1 1.9100 4.9336 -3.4934
27 6 1.7874 3.5757 -1.1220
28 1 -0.3634 -1.0236 0.0914
29 1 -0.3633 0.5910 0.8407
30 1 -0.3634 0.4326 -0.9322
31 1 1.8933 -0.5138 -0.8900
32 1 1.8933 -0.5138 0.8899
33 1 -1.0669 1.7607 2.4127
34 1 -0.6954 2.7509 3.8444
35 1 0.0190 3.1636 2.2673
36 1 4.2342 1.2859 -1.3303
37 1 3.8295 2.3676 -2.7053
38 1 5.0368 3.8678 -1.2540
39 1 4.3587 3.1188 0.2229
40 1 1.2577 8.3104 -1.1939
41 1 1.3232 3.9238 -2.0447
42 1 1.0927 3.6883 -0.2896
RHF calculation, no. of doubly occupied orbitals= 58
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
ZINC001033849343.mol2 42
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Tue Mar 31 2020 17:56:23
Heat of formation + Delta-G solvation = 99.171754 kcal
Electronic energy + Delta-G solvation = -27600.750575 eV
Core-core repulsion = 23838.962072 eV
Total energy + Delta-G solvation = -3761.788503 eV
No. of doubly occupied orbitals = 58
Molecular weight
(most abundant/longest-lived isotopes) = 326.125 amu
Computer time = 0.83 seconds
Orbital eigenvalues (eV)
-41.68608 -39.81872 -36.92612 -36.45129 -35.41920 -32.83267 -32.32151 -31.20929
-30.43006 -29.09319 -28.06218 -27.20604 -24.28439 -23.45518 -22.59359 -22.03320
-20.66185 -19.93792 -18.49633 -17.59925 -16.73549 -16.46040 -16.20981 -15.36462
-15.28012 -15.06410 -14.88979 -13.99044 -13.83270 -13.58271 -13.47476 -13.23429
-13.22835 -12.90756 -12.53836 -12.39586 -12.09149 -12.05507 -11.85344 -11.77321
-11.45555 -11.19493 -11.18219 -10.87435 -10.78340 -10.69242 -10.38120 -10.17723
-9.77127 -9.59288 -9.26277 -9.16902 -8.69791 -8.41065 -8.10759 -6.57867
-5.74513 -3.00507 1.33746 1.40754 2.10458 2.73907 2.98529 3.35446
3.44221 3.56786 3.61946 4.39025 4.67484 4.72278 4.76957 4.94795
5.05207 5.12536 5.20222 5.22228 5.37432 5.39624 5.52473 5.56325
5.62356 5.66371 5.69817 5.74573 5.79003 5.88668 6.09262 6.13153
6.26695 6.39222 6.48950 6.69882 6.81384 6.91423 7.09327 7.13218
7.28414 7.76591 8.08524 8.56270 8.74658 9.11781 9.93684 10.51887
11.43930
Molecular weight = 326.13amu
Principal moments of inertia in cm(-1)
A = 0.015509 B = 0.005070 C = 0.004868
Principal moments of inertia in units of 10**(-40)*gram-cm**2
A = 1804.983888 B = 5521.543671 C = 5750.890816
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.171 4.171
2 C 0.112 3.888
3 N -0.601 5.601
4 C 0.566 3.434
5 O -0.447 6.447
6 C -0.251 4.251
7 C 0.141 3.859
8 C -0.103 4.103
9 N -0.451 5.451
10 H 0.446 0.554
11 N -0.281 5.281
12 C 0.154 3.846
13 Cl 0.017 6.983
14 C 0.135 3.865
15 H 0.088 0.912
16 C -0.148 4.148
17 C 0.137 3.863
18 N -0.584 5.584
19 C -0.212 4.212
20 H 0.083 0.917
21 C 0.015 3.985
22 N -0.916 5.916
23 Si 0.886 3.114
24 H -0.292 1.292
25 H -0.307 1.307
26 H -0.277 1.277
27 C 0.129 3.871
28 H 0.060 0.940
29 H 0.056 0.944
30 H 0.059 0.941
31 H 0.075 0.925
32 H 0.072 0.928
33 H 0.088 0.912
34 H 0.082 0.918
35 H 0.100 0.900
36 H 0.065 0.935
37 H 0.071 0.929
38 H 0.034 0.966
39 H 0.050 0.950
40 H 0.258 0.742
41 H 0.023 0.977
42 H 0.036 0.964
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -4.815 -21.018 6.144 22.421
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.230 4.230
2 C -0.012 4.012
3 N -0.337 5.337
4 C 0.350 3.650
5 O -0.316 6.316
6 C -0.266 4.266
7 C 0.009 3.991
8 C -0.161 4.161
9 N -0.161 5.161
10 H 0.292 0.708
11 N -0.107 5.107
12 C -0.038 4.038
13 Cl 0.045 6.955
14 C 0.031 3.969
15 H 0.106 0.894
16 C -0.188 4.188
17 C 0.012 3.988
18 N -0.310 5.310
19 C -0.340 4.340
20 H 0.101 0.899
21 C -0.182 4.182
22 N -0.561 5.561
23 Si 0.718 3.282
24 H -0.220 1.220
25 H -0.236 1.236
26 H -0.204 1.204
27 C 0.003 3.997
28 H 0.079 0.921
29 H 0.075 0.925
30 H 0.078 0.922
31 H 0.093 0.907
32 H 0.091 0.909
33 H 0.106 0.894
34 H 0.101 0.899
35 H 0.119 0.881
36 H 0.084 0.916
37 H 0.090 0.910
38 H 0.052 0.948
39 H 0.068 0.932
40 H 0.068 0.932
41 H 0.040 0.960
42 H 0.054 0.946
Dipole moment (debyes) X Y Z Total
from point charges -4.336 -20.899 7.115 22.499
hybrid contribution -1.019 -0.072 -1.098 1.500
sum -5.354 -20.971 6.017 22.465
Atomic orbital electron populations
1.22253 0.96413 1.01637 1.02665 1.21399 0.94089 0.83062 1.02606
1.47850 1.66863 1.13445 1.05498 1.17204 0.79896 0.85993 0.81944
1.91156 1.37589 1.16959 1.85871 1.19992 0.96542 1.08186 1.01885
1.21385 0.96693 0.93538 0.87467 1.20686 0.92995 0.98535 1.03927
1.45790 1.15783 1.34417 1.20083 0.70820 1.77084 0.94195 1.20467
1.18908 1.22560 0.90670 0.96766 0.93828 1.98415 1.21343 1.88722
1.86999 1.22063 0.96954 0.93663 0.84171 0.89398 1.23272 0.95237
0.99651 1.00614 1.21845 0.90981 0.88738 0.97209 1.44265 1.00076
1.02470 1.84197 1.18590 1.12303 0.78476 1.24607 0.89913 1.25114
0.98752 0.95188 0.99138 1.69857 1.35475 1.09298 1.41512 0.86813
0.79830 0.76228 0.85289 1.22025 1.23574 1.20357 1.21672 0.91917
0.88260 0.97804 0.92096 0.92466 0.92159 0.90651 0.90923 0.89360
0.89944 0.88134 0.91628 0.91010 0.94810 0.93213 0.93179 0.95991
0.94568
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 17.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.17 -1.63 10.24 37.16 0.38 -1.25 16
2 C 0.11 1.23 5.92 -4.04 -0.02 1.21 16
3 N -0.60 -9.03 2.52 -165.30 -0.42 -9.45 16
4 C 0.57 9.82 6.04 -12.54 -0.08 9.74 16
5 O -0.45 -10.05 10.52 5.27 0.06 -9.99 16
6 C -0.25 -3.67 4.33 -105.04 -0.45 -4.12 16
7 C 0.14 1.65 7.01 -81.61 -0.57 1.08 16
8 C -0.10 -1.01 9.90 36.01 0.36 -0.65 16
9 N -0.45 -4.51 7.28 33.86 0.25 -4.26 16
10 H 0.45 2.68 8.96 -182.73 -1.64 1.04 16
11 N -0.28 -3.63 12.64 33.17 0.42 -3.21 16
12 C 0.15 2.16 7.11 -16.91 -0.12 2.04 16
13 Cl 0.02 0.23 29.19 -51.86 -1.51 -1.28 16
14 C 0.13 2.30 3.67 -66.10 -0.24 2.06 16
15 H 0.09 1.26 8.04 -51.93 -0.42 0.84 16
16 C -0.15 -2.55 6.74 -24.58 -0.17 -2.72 16
17 C 0.14 3.01 6.28 -2.53 -0.02 2.99 16
18 N -0.58 -15.03 1.93 -170.07 -0.33 -15.36 16
19 C -0.21 -6.38 10.54 -15.06 -0.16 -6.54 16
20 H 0.08 2.70 8.06 -52.49 -0.42 2.28 16
21 C 0.02 0.46 5.44 -17.43 -0.09 0.37 16
22 N -0.92 -29.51 13.97 55.49 0.78 -28.74 16
23 Si 0.89 23.54 24.50 -169.99 -4.17 19.37 16
24 H -0.29 -7.52 7.03 56.52 0.40 -7.12 16
25 H -0.31 -8.25 7.11 56.52 0.40 -7.85 16
26 H -0.28 -7.15 6.87 56.52 0.39 -6.76 16
27 C 0.13 2.93 4.51 -3.06 -0.01 2.91 16
28 H 0.06 0.46 8.14 -51.93 -0.42 0.04 16
29 H 0.06 0.57 6.36 -51.93 -0.33 0.24 16
30 H 0.06 0.59 8.14 -51.93 -0.42 0.17 16
31 H 0.08 0.71 8.10 -51.93 -0.42 0.29 16
32 H 0.07 0.80 6.27 -51.93 -0.33 0.48 16
33 H 0.09 0.67 7.11 -51.93 -0.37 0.30 16
34 H 0.08 0.60 8.14 -51.93 -0.42 0.18 16
35 H 0.10 1.33 7.84 -51.93 -0.41 0.92 16
36 H 0.07 0.98 8.14 -51.92 -0.42 0.56 16
37 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16
38 H 0.03 0.75 8.14 -51.93 -0.42 0.32 16
39 H 0.05 1.15 5.61 -51.93 -0.29 0.86 16
40 H 0.26 7.89 8.31 -40.82 -0.34 7.55 16
41 H 0.02 0.55 3.26 -51.93 -0.17 0.38 16
42 H 0.04 0.88 7.04 -51.93 -0.37 0.51 16
LS Contribution 345.07 15.07 5.20 5.20
Total: -1.00 -36.82 345.07 -7.77 -44.59
By element:
Atomic # 1 Polarization: 2.85 SS G_CDS: -6.85 Total: -4.00 kcal
Atomic # 6 Polarization: 8.32 SS G_CDS: -1.20 Total: 7.12 kcal
Atomic # 7 Polarization: -61.71 SS G_CDS: 0.70 Total: -61.02 kcal
Atomic # 8 Polarization: -10.05 SS G_CDS: 0.06 Total: -9.99 kcal
Atomic # 14 Polarization: 23.54 SS G_CDS: -4.17 Total: 19.37 kcal
Atomic # 17 Polarization: 0.23 SS G_CDS: -1.51 Total: -1.28 kcal
Total LS contribution 5.20 Total: 5.20 kcal
Total: -36.82 -7.77 -44.59 kcal
The number of atoms in the molecule is 42
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
ZINC001033849343.mol2 42
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute 143.763 kcal
(2) G-P(sol) polarization free energy of solvation -36.818 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.945 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.773 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.591 kcal
(6) G-S(sol) free energy of system = (1) + (5) 99.172 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.83 seconds