Wall clock time and date at job start Tue Mar 31 2020 15:51:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38285 * 119.92889 * 2 1 4 4 C 1.38112 * 120.06968 * 180.02562 * 3 2 1 5 5 C 1.38873 * 119.93035 * 359.97438 * 4 3 2 6 6 N 1.39922 * 120.06901 * 179.97438 * 5 4 3 7 7 C 1.46494 * 120.00410 * 56.94281 * 6 5 4 8 8 C 1.50700 * 109.47441 * 90.00229 * 7 6 5 9 9 H 1.08001 * 119.99549 * 359.97438 * 8 7 6 10 10 C 1.37874 * 120.00245 * 179.72485 * 8 7 6 11 11 N 1.31516 * 119.99809 * 0.27294 * 10 8 7 12 12 Si 1.86797 * 120.00104 * 180.27165 * 10 8 7 13 13 H 1.48501 * 109.47075 * 60.00045 * 12 10 8 14 14 H 1.48497 * 109.47078 * 180.02562 * 12 10 8 15 15 H 1.48499 * 109.47009 * 299.99814 * 12 10 8 16 16 C 1.34779 * 119.99437 * 236.94288 * 6 5 4 17 17 O 1.21291 * 120.00390 * 5.67318 * 16 6 5 18 18 C 1.50702 * 119.99780 * 185.67694 * 16 6 5 19 19 H 1.08996 * 115.55014 * 325.66611 * 18 16 6 20 20 C 1.53006 * 117.49709 * 179.97438 * 18 16 6 21 21 C 1.52997 * 59.99882 * 252.50762 * 20 18 16 22 22 Cl 1.80305 * 117.49839 * 252.51129 * 21 20 18 23 23 Cl 1.80300 * 117.49744 * 107.49230 * 21 20 18 24 24 C 1.38875 * 119.85809 * 0.25738 * 5 4 3 25 25 C 1.38114 * 119.92483 * 359.50894 * 24 5 4 26 26 H 1.08996 * 109.47085 * 89.99514 * 1 2 3 27 27 H 1.08994 * 109.46969 * 210.00164 * 1 2 3 28 28 H 1.09003 * 109.46801 * 329.99858 * 1 2 3 29 29 H 1.08001 * 119.96570 * 359.97438 * 3 2 1 30 30 H 1.08002 * 120.03235 * 179.97438 * 4 3 2 31 31 H 1.08995 * 109.46936 * 329.99375 * 7 6 5 32 32 H 1.09005 * 109.46809 * 210.00226 * 7 6 5 33 33 H 0.96996 * 119.99867 * 179.97438 * 11 10 8 34 34 H 1.08994 * 117.50113 * 0.02562 * 20 18 16 35 35 H 1.09003 * 117.49676 * 145.02009 * 20 18 16 36 36 H 1.07994 * 120.03555 * 179.74941 * 24 5 4 37 37 H 1.08006 * 119.96188 * 180.23186 * 25 24 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1970 1.1984 0.0000 4 6 3.5781 1.2018 -0.0005 5 6 4.2739 0.0000 -0.0005 6 7 5.6732 0.0001 -0.0016 7 6 6.4065 0.6926 1.0608 8 6 6.6587 -0.2604 2.2006 9 1 6.3074 -1.2799 2.1399 10 6 7.3424 0.1677 3.3188 11 7 7.7698 1.4093 3.3929 12 14 7.6616 -1.0156 4.7284 13 1 8.4619 -2.1661 4.2373 14 1 8.4092 -0.3149 5.8033 15 1 6.3670 -1.5063 5.2655 16 6 6.3462 -0.6371 -0.9802 17 8 5.7435 -1.1220 -1.9143 18 6 7.8477 -0.7470 -0.9136 19 1 8.3623 0.1052 -0.4697 20 6 8.5535 -1.4827 -2.0546 21 6 8.4446 -2.1354 -0.6751 22 17 9.9456 -2.2367 0.3188 23 17 7.2977 -3.5149 -0.4950 24 6 3.5781 -1.2018 -0.0054 25 6 2.1970 -1.1983 0.0000 26 1 -0.3633 0.0001 -1.0276 27 1 -0.3633 -0.8899 0.5138 28 1 -0.3633 0.8900 0.5139 29 1 1.6552 2.1328 -0.0004 30 1 4.1163 2.1382 -0.0010 31 1 5.8178 1.5378 1.4172 32 1 7.3586 1.0520 0.6702 33 1 8.2504 1.7106 4.1797 34 1 7.9318 -1.8868 -2.8534 35 1 9.5325 -1.1146 -2.3613 36 1 4.1163 -2.1381 -0.0095 37 1 1.6552 -2.1327 0.0000 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299266099.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:51:04 Heat of formation + Delta-G solvation = 6.596532 kcal Electronic energy + Delta-G solvation = -23453.962700 eV Core-core repulsion = 19863.024491 eV Total energy + Delta-G solvation = -3590.938209 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 327.053 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -40.18511 -38.58507 -36.88186 -35.72588 -35.36643 -34.74681 -32.81671 -31.42161 -30.56399 -27.56898 -26.45587 -24.05670 -23.19612 -22.08065 -22.03500 -20.86963 -18.75136 -17.49532 -16.72392 -16.42026 -15.49221 -15.15139 -14.90867 -14.81890 -14.30229 -13.80241 -13.60850 -13.49631 -13.06116 -12.79404 -12.65691 -12.41280 -12.13797 -12.01583 -11.77756 -11.67415 -11.37691 -11.28660 -11.03749 -10.91081 -10.77094 -10.70831 -10.58761 -10.34414 -10.18389 -9.90078 -9.68191 -9.35082 -8.69553 -8.57205 -8.50988 -7.50003 -6.20209 -4.26417 1.39918 1.68537 1.83014 2.39123 2.76627 3.27173 3.30326 3.34806 3.50462 3.76555 4.16119 4.34123 4.47577 4.57579 5.06724 5.14877 5.15781 5.17509 5.38541 5.46615 5.55456 5.58809 5.71214 5.80483 5.89188 5.96514 6.06454 6.11598 6.41132 6.59756 6.77969 6.88201 6.93711 7.07162 7.21461 7.56114 7.74565 7.97380 8.03905 8.65658 8.82543 9.41454 10.86980 Molecular weight = 327.05amu Principal moments of inertia in cm(-1) A = 0.010566 B = 0.005811 C = 0.004439 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2649.483837 B = 4817.485940 C = 6306.289796 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.107 4.107 2 C -0.108 4.108 3 C -0.110 4.110 4 C -0.124 4.124 5 C 0.173 3.827 6 N -0.546 5.546 7 C 0.237 3.763 8 C -0.531 4.531 9 H 0.062 0.938 10 C 0.072 3.928 11 N -0.892 5.892 12 Si 0.889 3.111 13 H -0.271 1.271 14 H -0.286 1.286 15 H -0.275 1.275 16 C 0.550 3.450 17 O -0.540 6.540 18 C -0.140 4.140 19 H 0.152 0.848 20 C -0.124 4.124 21 C 0.037 3.963 22 Cl -0.087 7.087 23 Cl -0.086 7.086 24 C -0.105 4.105 25 C -0.110 4.110 26 H 0.064 0.936 27 H 0.061 0.939 28 H 0.062 0.938 29 H 0.120 0.880 30 H 0.123 0.877 31 H 0.042 0.958 32 H 0.041 0.959 33 H 0.266 0.734 34 H 0.129 0.871 35 H 0.124 0.876 36 H 0.119 0.881 37 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.540 -2.653 -8.295 9.401 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.109 4.109 3 C -0.128 4.128 4 C -0.144 4.144 5 C 0.081 3.919 6 N -0.271 5.271 7 C 0.119 3.881 8 C -0.570 4.570 9 H 0.080 0.920 10 C -0.131 4.131 11 N -0.530 5.530 12 Si 0.716 3.284 13 H -0.196 1.196 14 H -0.211 1.211 15 H -0.201 1.201 16 C 0.338 3.662 17 O -0.418 6.418 18 C -0.161 4.161 19 H 0.170 0.830 20 C -0.163 4.163 21 C -0.015 4.015 22 Cl -0.060 7.060 23 Cl -0.059 7.059 24 C -0.125 4.125 25 C -0.129 4.129 26 H 0.083 0.917 27 H 0.080 0.920 28 H 0.081 0.919 29 H 0.138 0.862 30 H 0.141 0.859 31 H 0.060 0.940 32 H 0.059 0.941 33 H 0.075 0.925 34 H 0.147 0.853 35 H 0.143 0.857 36 H 0.137 0.863 37 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -3.675 -2.878 -8.538 9.731 hybrid contribution 0.484 -0.627 1.365 1.579 sum -3.191 -3.505 -7.173 8.598 Atomic orbital electron populations 1.20705 0.91661 1.02295 1.01726 1.19778 0.95661 0.93220 1.02213 1.20749 0.93409 0.97277 1.01397 1.21085 0.94177 0.97295 1.01826 1.17562 0.83032 0.93141 0.98138 1.45822 1.03548 1.51779 1.25958 1.19662 0.91678 0.92856 0.83920 1.21306 1.36790 0.97698 1.01190 0.91957 1.24819 0.95005 0.95122 0.98131 1.69892 1.37804 1.15541 1.29769 0.86665 0.78709 0.81340 0.81655 1.19586 1.21142 1.20089 1.19140 0.87413 0.77831 0.81826 1.90662 1.69530 1.47931 1.33723 1.23116 0.94960 0.96010 1.02038 0.83026 1.23982 1.03162 0.98396 0.90718 1.26242 0.87393 0.89155 0.98699 1.98750 1.35626 1.98211 1.73374 1.98745 1.61332 1.47914 1.97944 1.21092 0.94017 0.97467 0.99886 1.20782 0.93504 0.97290 1.01298 0.91730 0.91952 0.91911 0.86246 0.85866 0.93961 0.94134 0.92454 0.85309 0.85746 0.86306 0.86419 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.17 10.01 36.01 0.36 -0.81 16 2 C -0.11 -1.60 5.88 -104.59 -0.62 -2.21 16 3 C -0.11 -1.68 9.69 -39.61 -0.38 -2.06 16 4 C -0.12 -2.22 9.32 -39.39 -0.37 -2.58 16 5 C 0.17 3.47 5.16 -83.69 -0.43 3.04 16 6 N -0.55 -11.42 2.56 -114.74 -0.29 -11.72 16 7 C 0.24 5.45 4.84 -5.20 -0.03 5.43 16 8 C -0.53 -13.54 9.38 -34.44 -0.32 -13.87 16 9 H 0.06 1.65 7.81 -52.49 -0.41 1.24 16 10 C 0.07 1.89 5.46 -17.82 -0.10 1.80 16 11 N -0.89 -24.06 13.29 55.43 0.74 -23.32 16 12 Si 0.89 20.87 29.54 -169.99 -5.02 15.85 16 13 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 14 H -0.29 -6.63 7.11 56.52 0.40 -6.23 16 15 H -0.28 -6.49 7.11 56.52 0.40 -6.08 16 16 C 0.55 10.93 6.32 -10.98 -0.07 10.87 16 17 O -0.54 -11.34 15.47 5.55 0.09 -11.25 16 18 C -0.14 -2.42 5.19 -91.77 -0.48 -2.90 16 19 H 0.15 2.65 6.41 -51.93 -0.33 2.31 16 20 C -0.12 -1.71 9.73 -26.73 -0.26 -1.97 16 21 C 0.04 0.62 3.61 -26.73 -0.10 0.53 16 22 Cl -0.09 -1.45 29.29 -51.86 -1.52 -2.97 16 23 Cl -0.09 -1.53 28.18 -51.86 -1.46 -2.99 16 24 C -0.10 -2.00 8.95 -39.39 -0.35 -2.35 16 25 C -0.11 -1.77 9.69 -39.61 -0.38 -2.15 16 26 H 0.06 0.63 8.14 -51.93 -0.42 0.21 16 27 H 0.06 0.62 8.08 -51.93 -0.42 0.20 16 28 H 0.06 0.61 8.08 -51.93 -0.42 0.19 16 29 H 0.12 1.49 8.06 -52.49 -0.42 1.07 16 30 H 0.12 2.09 7.83 -52.49 -0.41 1.68 16 31 H 0.04 1.03 7.36 -51.93 -0.38 0.65 16 32 H 0.04 0.94 6.11 -51.93 -0.32 0.62 16 33 H 0.27 6.91 8.31 -40.82 -0.34 6.57 16 34 H 0.13 1.76 7.67 -51.93 -0.40 1.36 16 35 H 0.12 1.33 8.14 -51.93 -0.42 0.91 16 36 H 0.12 2.36 8.05 -52.49 -0.42 1.94 16 37 H 0.12 1.60 8.06 -52.48 -0.42 1.17 16 LS Contribution 350.99 15.07 5.29 5.29 Total: -1.00 -28.46 350.99 -10.04 -38.50 By element: Atomic # 1 Polarization: 6.20 SS G_CDS: -4.34 Total: 1.86 kcal Atomic # 6 Polarization: -5.74 SS G_CDS: -3.52 Total: -9.26 kcal Atomic # 7 Polarization: -35.48 SS G_CDS: 0.44 Total: -35.04 kcal Atomic # 8 Polarization: -11.34 SS G_CDS: 0.09 Total: -11.25 kcal Atomic # 14 Polarization: 20.87 SS G_CDS: -5.02 Total: 15.85 kcal Atomic # 17 Polarization: -2.98 SS G_CDS: -2.98 Total: -5.96 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -28.46 -10.04 -38.50 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299266099.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.098 kcal (2) G-P(sol) polarization free energy of solvation -28.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.641 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.045 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.502 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds