Wall clock time and date at job start Tue Mar 31 2020 15:46:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42896 * 114.00070 * 2 1 4 4 C 1.52990 * 109.47191 * 180.02562 * 3 2 1 5 5 N 1.46504 * 109.47161 * 65.00127 * 4 3 2 6 6 C 1.36938 * 119.99827 * 269.99917 * 5 4 3 7 7 H 1.07993 * 119.99985 * 142.33593 * 6 5 4 8 8 C 1.38809 * 119.99834 * 322.33069 * 6 5 4 9 9 N 1.31619 * 120.00551 * 340.17486 * 8 6 5 10 10 Si 1.86809 * 119.99724 * 160.17368 * 8 6 5 11 11 H 1.48503 * 109.47078 * 60.00226 * 10 8 6 12 12 H 1.48496 * 109.47197 * 179.97438 * 10 8 6 13 13 H 1.48497 * 109.47000 * 300.00512 * 10 8 6 14 14 C 1.46501 * 120.00156 * 90.00213 * 5 4 3 15 15 C 1.50698 * 109.46667 * 264.58318 * 14 5 4 16 16 C 1.38261 * 120.00209 * 92.54088 * 15 14 5 17 17 C 1.38212 * 120.02330 * 180.25182 * 16 15 14 18 18 C 1.38243 * 120.01167 * 359.49004 * 17 16 15 19 19 C 1.50692 * 120.00718 * 180.25490 * 18 17 16 20 20 C 1.38306 * 119.98746 * 0.53041 * 18 17 16 21 21 Br 1.89094 * 120.01049 * 179.70453 * 20 18 17 22 22 C 1.38198 * 119.99043 * 272.55655 * 15 14 5 23 23 H 1.09009 * 109.47229 * 179.97438 * 1 2 3 24 24 H 1.08992 * 109.47038 * 299.99688 * 1 2 3 25 25 H 1.08996 * 109.47511 * 59.99971 * 1 2 3 26 26 H 1.09001 * 109.46884 * 59.99865 * 3 2 1 27 27 H 1.09007 * 109.46871 * 300.00383 * 3 2 1 28 28 H 1.08998 * 109.47502 * 304.99609 * 4 3 2 29 29 H 1.09003 * 109.47509 * 184.99900 * 4 3 2 30 30 H 0.96997 * 120.00077 * 179.97438 * 9 8 6 31 31 H 1.08992 * 109.47345 * 144.57890 * 14 5 4 32 32 H 1.09000 * 109.47178 * 24.57853 * 14 5 4 33 33 H 1.08002 * 119.98190 * 359.97170 * 16 15 14 34 34 H 1.08006 * 119.99746 * 179.74006 * 17 16 15 35 35 H 1.08997 * 109.47386 * 270.27283 * 19 18 17 36 36 H 1.09005 * 109.47314 * 30.27224 * 19 18 17 37 37 H 1.08997 * 109.47433 * 150.27305 * 19 18 17 38 38 H 1.08001 * 120.00991 * 359.97438 * 22 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5354 1.1846 -0.0006 5 7 3.9756 0.5644 -1.2528 6 6 4.0967 -0.7970 -1.3369 7 1 3.8200 -1.3085 -2.2469 8 6 4.5752 -1.5195 -0.2526 9 7 5.2669 -0.9132 0.6888 10 14 4.2373 -3.3527 -0.1294 11 1 4.8212 -4.0439 -1.3069 12 1 4.8517 -3.8869 1.1125 13 1 2.7709 -3.5846 -0.0962 14 6 4.2863 1.4006 -2.4148 15 6 3.0776 1.4843 -3.3110 16 6 2.1754 2.5210 -3.1598 17 6 1.0639 2.5953 -3.9780 18 6 0.8594 1.6389 -4.9550 19 6 -0.3494 1.7232 -5.8508 20 6 1.7614 0.6014 -5.1064 21 35 1.4778 -0.7118 -6.4371 22 6 2.8711 0.5246 -4.2836 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8899 25 1 -0.3634 0.5138 -0.8899 26 1 1.6886 1.8463 0.8900 27 1 1.6885 1.8464 -0.8900 28 1 3.8514 0.5683 0.8409 29 1 3.9785 2.1765 0.0889 30 1 5.6009 -1.4181 1.4467 31 1 5.1178 0.9620 -2.9663 32 1 4.5601 2.4011 -2.0798 33 1 2.3368 3.2704 -2.3991 34 1 0.3572 3.4029 -3.8568 35 1 -1.1773 1.1792 -5.3961 36 1 -0.6308 2.7678 -5.9841 37 1 -0.1147 1.2836 -6.8202 38 1 3.5759 -0.2851 -4.4019 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000316621152.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:46:41 Heat of formation + Delta-G solvation = 0.298814 kcal Electronic energy + Delta-G solvation = -20764.796992 eV Core-core repulsion = 17654.281937 eV Total energy + Delta-G solvation = -3110.515054 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 327.058 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -39.21912 -37.12702 -35.44009 -33.04888 -31.78384 -31.06698 -29.33215 -28.87031 -27.27511 -25.61993 -24.61489 -22.73046 -22.20823 -20.78673 -19.93512 -16.70967 -15.77991 -15.72384 -15.32214 -14.90988 -14.67550 -14.65384 -13.98474 -13.86214 -13.43805 -13.21485 -13.08105 -12.69935 -12.30114 -11.94872 -11.78066 -11.59928 -11.25463 -11.00404 -10.79785 -10.76391 -10.63782 -10.52414 -10.50896 -10.02967 -9.97027 -9.85894 -9.68991 -8.79178 -8.45551 -8.36388 -8.07721 -6.53233 -5.69359 -3.27965 1.48893 1.69516 1.92348 3.46973 3.51265 3.58465 3.97600 4.61221 4.73722 4.97741 5.05959 5.34830 5.38768 5.51368 5.59579 5.65251 5.74107 5.78863 5.84958 5.85816 5.88787 6.01665 6.11595 6.19767 6.29950 6.33790 6.38393 6.55236 6.61749 6.66922 6.69529 6.81041 7.10268 7.25855 7.68510 7.91270 8.12295 8.61068 9.24609 9.87872 10.41788 11.32013 Molecular weight = 327.06amu Principal moments of inertia in cm(-1) A = 0.013747 B = 0.005348 C = 0.004644 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2036.368839 B = 5234.765786 C = 6028.116751 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.352 6.352 3 C 0.042 3.958 4 C 0.141 3.859 5 N -0.566 5.566 6 C -0.241 4.241 7 H 0.056 0.944 8 C 0.021 3.979 9 N -0.894 5.894 10 Si 0.897 3.103 11 H -0.284 1.284 12 H -0.293 1.293 13 H -0.281 1.281 14 C 0.175 3.825 15 C -0.071 4.071 16 C -0.098 4.098 17 C -0.122 4.122 18 C -0.078 4.078 19 C -0.118 4.118 20 C -0.090 4.090 21 Br -0.069 7.069 22 C -0.068 4.068 23 H 0.073 0.927 24 H 0.025 0.975 25 H 0.027 0.973 26 H 0.020 0.980 27 H 0.033 0.967 28 H 0.106 0.894 29 H 0.039 0.961 30 H 0.253 0.747 31 H 0.059 0.941 32 H 0.049 0.951 33 H 0.120 0.880 34 H 0.120 0.880 35 H 0.070 0.930 36 H 0.064 0.936 37 H 0.071 0.929 38 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.498 6.883 -10.808 15.950 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.270 6.270 3 C -0.037 4.037 4 C 0.015 3.985 5 N -0.284 5.284 6 C -0.370 4.370 7 H 0.073 0.927 8 C -0.178 4.178 9 N -0.537 5.537 10 Si 0.727 3.273 11 H -0.210 1.210 12 H -0.219 1.219 13 H -0.207 1.207 14 C 0.048 3.952 15 C -0.075 4.075 16 C -0.117 4.117 17 C -0.141 4.141 18 C -0.081 4.081 19 C -0.175 4.175 20 C -0.169 4.169 21 Br 0.017 6.983 22 C -0.088 4.088 23 H 0.091 0.909 24 H 0.043 0.957 25 H 0.046 0.954 26 H 0.038 0.962 27 H 0.051 0.949 28 H 0.124 0.876 29 H 0.058 0.942 30 H 0.063 0.937 31 H 0.077 0.923 32 H 0.067 0.933 33 H 0.138 0.862 34 H 0.138 0.862 35 H 0.088 0.912 36 H 0.083 0.917 37 H 0.090 0.910 38 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -9.354 6.132 -11.129 15.779 hybrid contribution -0.671 -0.460 0.532 0.972 sum -10.025 5.672 -10.597 15.652 Atomic orbital electron populations 1.22602 0.84405 1.01358 0.98238 1.88217 1.16383 1.27578 1.94783 1.23520 0.98949 0.84319 0.96958 1.21113 0.87496 0.96618 0.93310 1.43599 1.75359 1.02788 1.06671 1.18772 1.36387 0.81419 1.00442 0.92652 1.25013 0.96419 0.97656 0.98737 1.69920 1.35588 1.35632 1.12576 0.86472 0.78433 0.85660 0.76767 1.21008 1.21881 1.20717 1.19949 0.91052 0.95215 0.88961 1.21225 0.99430 0.92473 0.94359 1.21103 0.94079 0.98301 0.98235 1.20864 0.98251 0.98850 0.96142 1.19574 0.96211 0.94451 0.97830 1.20893 0.95338 1.02303 0.98922 1.21648 0.99861 0.96258 0.99090 1.96573 1.96847 1.53248 1.51653 1.21036 0.95710 0.98524 0.93567 0.90873 0.95659 0.95419 0.96151 0.94858 0.87616 0.94244 0.93674 0.92314 0.93308 0.86243 0.86212 0.91156 0.91655 0.90976 0.85199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.55 11.01 101.05 1.11 1.67 16 2 O -0.35 -7.96 10.18 -35.23 -0.36 -8.32 16 3 C 0.04 0.84 6.28 37.15 0.23 1.08 16 4 C 0.14 3.21 5.76 -4.04 -0.02 3.18 16 5 N -0.57 -13.43 2.40 -174.62 -0.42 -13.85 16 6 C -0.24 -6.46 8.96 -15.06 -0.13 -6.59 16 7 H 0.06 1.52 7.89 -52.49 -0.41 1.10 16 8 C 0.02 0.59 5.00 -17.43 -0.09 0.50 16 9 N -0.89 -25.52 11.38 55.49 0.63 -24.89 16 10 Si 0.90 22.40 29.60 -169.99 -5.03 17.37 16 11 H -0.28 -6.98 7.11 56.52 0.40 -6.57 16 12 H -0.29 -7.30 7.11 56.52 0.40 -6.90 16 13 H -0.28 -7.15 7.11 56.52 0.40 -6.75 16 14 C 0.18 3.48 5.85 -5.19 -0.03 3.45 16 15 C -0.07 -1.27 5.37 -104.63 -0.56 -1.84 16 16 C -0.10 -1.54 7.83 -39.58 -0.31 -1.85 16 17 C -0.12 -1.74 9.70 -39.59 -0.38 -2.12 16 18 C -0.08 -1.15 5.88 -104.60 -0.62 -1.76 16 19 C -0.12 -1.36 9.55 36.00 0.34 -1.02 16 20 C -0.09 -1.46 6.22 -39.51 -0.25 -1.70 16 21 Br -0.07 -0.99 31.79 -68.01 -2.16 -3.15 16 22 C -0.07 -1.23 9.45 -39.55 -0.37 -1.60 16 23 H 0.07 1.21 8.14 -51.92 -0.42 0.79 16 24 H 0.02 0.39 8.14 -51.93 -0.42 -0.04 16 25 H 0.03 0.46 8.14 -51.93 -0.42 0.03 16 26 H 0.02 0.37 8.14 -51.93 -0.42 -0.05 16 27 H 0.03 0.64 5.73 -51.93 -0.30 0.34 16 28 H 0.11 2.80 5.46 -51.93 -0.28 2.52 16 29 H 0.04 0.81 7.86 -51.93 -0.41 0.40 16 30 H 0.25 7.07 8.31 -40.82 -0.34 6.73 16 31 H 0.06 1.20 8.04 -51.93 -0.42 0.78 16 32 H 0.05 0.88 7.76 -51.93 -0.40 0.48 16 33 H 0.12 1.70 7.78 -52.49 -0.41 1.29 16 34 H 0.12 1.38 8.06 -52.48 -0.42 0.95 16 35 H 0.07 0.78 8.14 -51.93 -0.42 0.36 16 36 H 0.06 0.63 8.09 -51.93 -0.42 0.21 16 37 H 0.07 0.82 6.65 -51.93 -0.35 0.47 16 38 H 0.13 2.44 8.05 -52.49 -0.42 2.02 16 LS Contribution 333.89 15.07 5.03 5.03 Total: -1.00 -29.38 333.89 -8.88 -38.25 By element: Atomic # 1 Polarization: 3.66 SS G_CDS: -5.49 Total: -1.83 kcal Atomic # 6 Polarization: -7.52 SS G_CDS: -1.08 Total: -8.60 kcal Atomic # 7 Polarization: -38.95 SS G_CDS: 0.21 Total: -38.74 kcal Atomic # 8 Polarization: -7.96 SS G_CDS: -0.36 Total: -8.32 kcal Atomic # 14 Polarization: 22.40 SS G_CDS: -5.03 Total: 17.37 kcal Atomic # 35 Polarization: -0.99 SS G_CDS: -2.16 Total: -3.15 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -29.38 -8.88 -38.25 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000316621152.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.553 kcal (2) G-P(sol) polarization free energy of solvation -29.379 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.875 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.254 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.299 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds