Wall clock time and date at job start Tue Mar 31 2020 15:12:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.39937 * 120.45810 * 308.43214 * 3 2 1 5 5 N 1.31300 * 120.74265 * 179.76252 * 4 3 2 6 6 C 1.32843 * 121.81289 * 0.53512 * 5 4 3 7 7 C 1.48057 * 119.57903 * 179.74777 * 6 5 4 8 8 O 1.21533 * 120.00157 * 179.72050 * 7 6 5 9 9 N 1.34778 * 119.99949 * 359.72067 * 7 6 5 10 10 C 1.39086 * 119.99811 * 185.09943 * 9 7 6 11 11 C 1.39527 * 119.83648 * 34.39300 * 10 9 7 12 12 C 1.36343 * 120.16516 * 180.27266 * 11 10 9 13 13 C 1.40892 * 119.83211 * 359.45078 * 12 11 10 14 14 C 1.41119 * 120.15939 * 180.25105 * 13 12 11 15 15 H 1.08001 * 119.99492 * 205.52504 * 14 13 12 16 16 C 1.39924 * 120.00379 * 25.52525 * 14 13 12 17 17 N 1.30858 * 119.99857 * 16.69465 * 16 14 13 18 18 Si 1.86796 * 120.00147 * 196.70072 * 16 14 13 19 19 H 1.48500 * 109.47083 * 359.97438 * 18 16 14 20 20 H 1.48501 * 109.47274 * 120.00159 * 18 16 14 21 21 H 1.48503 * 109.46940 * 239.99729 * 18 16 14 22 22 C 1.40887 * 119.67562 * 0.56927 * 13 12 11 23 23 C 1.36342 * 119.83329 * 359.70553 * 22 13 12 24 24 C 1.39508 * 120.84087 * 359.46495 * 6 5 4 25 25 Cl 1.73603 * 120.41720 * 180.28220 * 24 6 5 26 26 C 1.38551 * 119.17040 * 0.26021 * 24 6 5 27 27 H 1.07999 * 119.62760 * 0.04735 * 4 3 2 28 28 H 0.97001 * 120.00456 * 5.10674 * 9 7 6 29 29 H 1.08003 * 119.91249 * 359.97438 * 11 10 9 30 30 H 1.08006 * 120.08528 * 179.69581 * 12 11 10 31 31 H 0.96996 * 120.00242 * 179.97438 * 17 16 14 32 32 H 1.07996 * 120.07866 * 179.69080 * 22 13 12 33 33 H 1.08003 * 119.92003 * 179.97438 * 23 22 13 34 34 H 1.07998 * 120.82943 * 179.97438 * 26 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2777 -0.7488 0.9449 5 7 4.5907 -0.7560 0.9471 6 6 5.2963 -0.0517 0.0691 7 6 6.7755 -0.0915 0.1201 8 8 7.4286 0.5457 -0.6826 9 7 7.3977 -0.8345 1.0567 10 6 8.7830 -0.7894 1.1729 11 6 9.4621 0.4035 0.9228 12 6 10.8204 0.4539 1.0293 13 6 11.5373 -0.6996 1.4041 14 6 12.9429 -0.6539 1.5215 15 1 13.5247 -1.5553 1.3975 16 6 13.5827 0.5592 1.7986 17 7 12.8954 1.5694 2.2670 18 14 15.4181 0.7368 1.4997 19 1 15.9595 -0.5412 0.9715 20 1 15.6564 1.8211 0.5134 21 1 16.0975 1.0714 2.7770 22 6 10.8447 -1.9007 1.6545 23 6 9.4867 -1.9374 1.5386 24 6 4.6613 0.7203 -0.9041 25 17 5.5943 1.6306 -2.0507 26 6 3.2767 0.7510 -0.9443 27 1 2.7394 -1.3316 1.6777 28 1 6.8795 -1.4008 1.6498 29 1 8.9107 1.2879 0.6395 30 1 11.3452 1.3767 0.8306 31 1 13.3390 2.4103 2.4594 32 1 11.3882 -2.7900 1.9373 33 1 8.9544 -2.8574 1.7298 34 1 2.7575 1.3398 -1.6860 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000427907216.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:12:46 Heat of formation + Delta-G solvation = 61.423470 kcal Electronic energy + Delta-G solvation = -22985.085811 eV Core-core repulsion = 19295.417582 eV Total energy + Delta-G solvation = -3689.668228 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 327.052 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.11765 -39.35935 -37.40683 -36.99565 -36.77020 -34.57742 -33.47190 -32.81495 -31.86482 -29.55395 -29.07289 -26.39363 -24.70178 -24.24062 -21.85483 -21.23865 -19.96132 -19.75140 -18.11948 -17.60192 -17.34644 -16.18072 -15.65436 -15.58022 -15.28884 -15.02856 -14.46003 -14.02117 -13.98400 -13.86577 -13.57737 -13.51171 -12.99350 -12.96740 -12.66631 -12.27759 -12.09216 -11.88531 -11.56596 -11.33448 -11.15202 -11.09757 -10.71211 -10.52754 -10.33596 -9.89696 -9.68759 -9.44384 -9.40138 -9.10217 -8.93208 -7.56431 -7.03425 -6.77896 -4.33629 -0.33968 0.43412 1.66261 2.05805 2.13858 2.61375 2.94099 3.05789 3.07263 3.07744 3.11644 3.17714 3.31745 3.62058 3.78242 3.90477 4.01688 4.30004 4.57154 4.59884 4.66964 5.14095 5.24363 5.64923 5.68673 6.13182 6.34349 6.72548 6.82471 6.91557 6.99783 7.05408 7.13473 7.23571 7.55162 7.62854 7.88305 8.01739 8.13768 8.26047 8.56738 8.64065 8.83934 8.95076 10.13431 Molecular weight = 327.05amu Principal moments of inertia in cm(-1) A = 0.027087 B = 0.002573 C = 0.002420 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1033.459888 B =10880.020552 C =11567.414772 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.396 5.396 2 C 0.257 3.743 3 C -0.057 4.057 4 C 0.155 3.845 5 N -0.442 5.442 6 C 0.133 3.867 7 C 0.537 3.463 8 O -0.496 6.496 9 N -0.619 5.619 10 C -0.012 4.012 11 C -0.082 4.082 12 C -0.155 4.155 13 C 0.107 3.893 14 C -0.454 4.454 15 H 0.079 0.921 16 C 0.074 3.926 17 N -0.788 5.788 18 Si 0.909 3.091 19 H -0.260 1.260 20 H -0.271 1.271 21 H -0.274 1.274 22 C -0.215 4.215 23 C -0.097 4.097 24 C -0.048 4.048 25 Cl 0.004 6.996 26 C -0.026 4.026 27 H 0.180 0.820 28 H 0.404 0.596 29 H 0.102 0.898 30 H 0.121 0.879 31 H 0.281 0.719 32 H 0.097 0.903 33 H 0.092 0.908 34 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.928 -1.174 -3.362 16.321 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.071 5.071 2 C -0.059 4.059 3 C -0.063 4.063 4 C -0.008 4.008 5 N -0.153 5.153 6 C -0.007 4.007 7 C 0.321 3.679 8 O -0.371 6.371 9 N -0.261 5.261 10 C -0.105 4.105 11 C -0.101 4.101 12 C -0.175 4.175 13 C 0.104 3.896 14 C -0.483 4.483 15 H 0.098 0.902 16 C -0.145 4.145 17 N -0.413 5.413 18 Si 0.733 3.267 19 H -0.183 1.183 20 H -0.196 1.196 21 H -0.200 1.200 22 C -0.235 4.235 23 C -0.117 4.117 24 C -0.079 4.079 25 Cl 0.034 6.966 26 C -0.054 4.054 27 H 0.197 0.803 28 H 0.240 0.760 29 H 0.120 0.880 30 H 0.138 0.862 31 H 0.092 0.908 32 H 0.115 0.885 33 H 0.110 0.890 34 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -16.597 -0.866 -3.338 16.951 hybrid contribution 0.430 0.444 -0.401 0.737 sum -16.166 -0.422 -3.739 16.598 Atomic orbital electron populations 1.81320 1.11583 1.07250 1.06914 1.25148 0.91945 0.94391 0.94456 1.17006 0.85944 1.03141 1.00216 1.23098 0.89192 0.93667 0.94881 1.67899 1.07812 1.17872 1.21689 1.21700 0.96246 0.92219 0.90545 1.17619 0.84562 0.83065 0.82691 1.90917 1.64492 1.42982 1.38676 1.42770 1.06850 1.43526 1.32968 1.17124 0.80129 0.95316 1.17896 1.20401 0.94861 0.94958 0.99925 1.20975 0.92232 0.99983 1.04337 1.17697 0.93378 0.91011 0.87474 1.19615 0.92062 0.94821 1.41786 0.90247 1.25952 1.00986 0.95245 0.92289 1.69837 1.38371 1.03377 1.29713 0.86251 0.82019 0.79551 0.78871 1.18348 1.19643 1.19980 1.20547 0.92708 0.98820 1.11443 1.20043 0.94500 0.94491 1.02707 1.21822 0.92348 0.98217 0.95483 1.98474 1.71726 1.70611 1.55805 1.21601 0.91593 0.95485 0.96752 0.80315 0.76039 0.87978 0.86169 0.90781 0.88516 0.88992 0.82122 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -3.99 18.54 41.84 0.78 -3.21 16 2 C 0.26 2.00 15.36 -22.47 -0.35 1.65 16 3 C -0.06 -0.40 5.75 -106.72 -0.61 -1.01 16 4 C 0.15 1.11 10.91 -17.14 -0.19 0.92 16 5 N -0.44 -4.59 9.52 -9.46 -0.09 -4.68 16 6 C 0.13 1.68 6.75 -82.93 -0.56 1.12 16 7 C 0.54 9.03 7.52 -12.23 -0.09 8.94 16 8 O -0.50 -9.78 11.62 5.34 0.06 -9.71 16 9 N -0.62 -10.69 5.29 -10.53 -0.06 -10.75 16 10 C -0.01 -0.26 6.27 -83.61 -0.52 -0.79 16 11 C -0.08 -1.94 8.57 -39.78 -0.34 -2.28 16 12 C -0.16 -4.02 8.63 -39.26 -0.34 -4.36 16 13 C 0.11 2.79 5.57 -106.80 -0.59 2.19 16 14 C -0.45 -11.70 9.04 -37.86 -0.34 -12.04 16 15 H 0.08 1.96 7.90 -52.49 -0.41 1.55 16 16 C 0.07 1.81 5.15 -17.34 -0.09 1.72 16 17 N -0.79 -19.96 10.95 55.55 0.61 -19.35 16 18 Si 0.91 18.27 29.59 -169.99 -5.03 13.24 16 19 H -0.26 -5.17 7.11 56.52 0.40 -4.77 16 20 H -0.27 -5.40 7.11 56.52 0.40 -5.00 16 21 H -0.27 -5.42 7.11 56.52 0.40 -5.02 16 22 C -0.22 -5.05 9.74 -39.26 -0.38 -5.43 16 23 C -0.10 -2.06 9.90 -39.78 -0.39 -2.46 16 24 C -0.05 -0.52 6.36 -38.99 -0.25 -0.77 16 25 Cl 0.00 0.05 26.00 -51.86 -1.35 -1.29 16 26 C -0.03 -0.19 9.70 -38.85 -0.38 -0.57 16 27 H 0.18 0.70 8.06 -52.49 -0.42 0.28 16 28 H 0.40 5.84 8.14 -40.82 -0.33 5.50 16 29 H 0.10 2.41 6.46 -52.48 -0.34 2.07 16 30 H 0.12 3.24 6.18 -52.48 -0.32 2.91 16 31 H 0.28 6.46 8.30 -40.82 -0.34 6.12 16 32 H 0.10 2.11 8.06 -52.49 -0.42 1.69 16 33 H 0.09 1.65 8.06 -52.48 -0.42 1.23 16 34 H 0.16 0.81 8.06 -52.49 -0.42 0.38 16 LS Contribution 327.25 15.07 4.93 4.93 Total: -1.00 -29.25 327.25 -7.81 -37.06 By element: Atomic # 1 Polarization: 9.18 SS G_CDS: -2.24 Total: 6.94 kcal Atomic # 6 Polarization: -7.75 SS G_CDS: -5.43 Total: -13.18 kcal Atomic # 7 Polarization: -39.22 SS G_CDS: 1.24 Total: -37.99 kcal Atomic # 8 Polarization: -9.78 SS G_CDS: 0.06 Total: -9.71 kcal Atomic # 14 Polarization: 18.27 SS G_CDS: -5.03 Total: 13.24 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -1.35 Total: -1.29 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -29.25 -7.81 -37.06 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000427907216.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.486 kcal (2) G-P(sol) polarization free energy of solvation -29.251 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.235 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.811 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.062 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.423 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds