Wall clock time and date at job start Tue Mar 31 2020 15:25:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 C 1.39948 * 120.44941 * 99.22498 * 3 2 1 5 5 N 1.31293 * 120.74641 * 179.75602 * 4 3 2 6 6 C 1.32913 * 121.80524 * 0.53587 * 5 4 3 7 7 C 1.47868 * 119.59139 * 179.74792 * 6 5 4 8 8 O 1.21572 * 120.00668 * 139.64404 * 7 6 5 9 9 N 1.34782 * 119.99586 * 319.92162 * 7 6 5 10 10 C 1.36734 * 120.00086 * 188.55724 * 9 7 6 11 11 H 1.07999 * 120.00278 * 54.96782 * 10 9 7 12 12 C 1.39109 * 120.00155 * 234.97946 * 10 9 7 13 13 N 1.31289 * 119.99904 * 357.91122 * 12 10 9 14 14 Si 1.86799 * 120.00230 * 177.92047 * 12 10 9 15 15 H 1.48493 * 109.47258 * 64.99760 * 14 12 10 16 16 H 1.48500 * 109.47305 * 185.00026 * 14 12 10 17 17 H 1.48504 * 109.46740 * 304.99662 * 14 12 10 18 18 C 1.39695 * 119.99963 * 8.55326 * 9 7 6 19 19 C 1.38982 * 120.08385 * 261.87649 * 18 9 7 20 20 C 1.38075 * 119.92111 * 179.81431 * 19 18 9 21 21 C 1.38303 * 120.08148 * 0.44086 * 20 19 18 22 22 C 1.38311 * 120.16281 * 359.79167 * 21 20 19 23 23 C 1.38085 * 120.07728 * 0.02562 * 22 21 20 24 24 C 1.39634 * 120.82487 * 359.46208 * 6 5 4 25 25 Cl 1.73596 * 120.41722 * 180.27916 * 24 6 5 26 26 C 1.38468 * 119.16460 * 0.26441 * 24 6 5 27 27 H 1.08001 * 119.62849 * 0.02678 * 4 3 2 28 28 H 0.96995 * 120.00350 * 185.02848 * 13 12 10 29 29 H 1.08001 * 120.03775 * 0.02562 * 19 18 9 30 30 H 1.08003 * 119.95685 * 180.21038 * 20 19 18 31 31 H 1.08005 * 119.92380 * 179.76554 * 21 20 19 32 32 H 1.07998 * 119.96326 * 179.97438 * 22 21 20 33 33 H 1.07999 * 120.04008 * 179.97438 * 23 22 21 34 34 H 1.08003 * 120.82185 * 179.97438 * 26 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2771 0.1944 -1.1909 5 7 4.5900 0.2008 -1.1968 6 6 5.2965 0.0151 -0.0864 7 6 6.7737 0.0264 -0.1503 8 8 7.4161 0.5710 0.7264 9 7 7.4080 -0.5625 -1.1836 10 6 8.7674 -0.7073 -1.1585 11 1 9.2419 -1.2081 -0.3276 12 6 9.5393 -0.2093 -2.2031 13 7 8.9597 0.3634 -3.2326 14 14 11.4006 -0.3554 -2.1412 15 1 11.7863 -1.7887 -2.1867 16 1 11.9918 0.3534 -3.3045 17 1 11.9032 0.2529 -0.8832 18 6 6.6764 -1.0249 -2.2802 19 6 6.3327 -2.3684 -2.3719 20 6 5.6063 -2.8211 -3.4553 21 6 5.2285 -1.9411 -4.4532 22 6 5.5728 -0.6043 -4.3678 23 6 6.2960 -0.1437 -3.2854 24 6 4.6611 -0.1845 1.1409 25 17 5.5943 -0.4187 2.5859 26 6 3.2774 -0.1929 1.1909 27 1 2.7383 0.3446 -2.1147 28 1 9.4911 0.6449 -3.9937 29 1 6.6306 -3.0569 -1.5949 30 1 5.3360 -3.8644 -3.5255 31 1 4.6636 -2.2987 -5.3014 32 1 5.2765 0.0800 -5.1490 33 1 6.5649 0.9003 -3.2195 34 1 2.7583 -0.3453 2.1257 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000439248923.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:25:03 Heat of formation + Delta-G solvation = 79.127852 kcal Electronic energy + Delta-G solvation = -24802.098391 eV Core-core repulsion = 21113.197882 eV Total energy + Delta-G solvation = -3688.900509 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 327.052 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -40.65218 -38.99552 -37.49078 -36.74022 -36.42434 -34.64564 -32.88711 -31.94415 -31.27265 -29.98394 -28.65945 -26.28010 -24.39595 -23.79504 -21.93297 -21.60687 -20.19153 -19.32507 -17.72282 -17.41502 -16.85017 -15.59534 -15.51709 -15.19176 -14.79886 -14.58372 -14.26332 -14.08604 -13.66638 -13.59632 -13.40558 -13.22066 -12.93043 -12.72716 -12.52088 -12.47161 -11.92500 -11.67432 -11.65538 -11.17427 -11.04769 -10.88768 -10.67567 -10.39894 -10.26083 -9.91136 -9.83704 -9.13430 -8.93561 -8.85840 -8.00077 -7.69920 -7.58318 -6.33017 -4.32468 0.21335 0.91252 2.01037 2.21943 2.40925 2.48286 2.63633 3.16347 3.22009 3.24400 3.42050 3.55660 3.88084 3.89145 4.23983 4.45062 4.54338 4.73693 4.88448 4.99385 5.04159 5.17195 5.59662 5.65493 5.67297 5.79193 5.93230 6.14311 6.32768 6.51932 6.72641 6.95783 7.18807 7.21913 7.36918 7.44208 7.67002 7.68401 7.81486 8.18773 8.38434 8.95846 9.10713 9.70998 10.61135 Molecular weight = 327.05amu Principal moments of inertia in cm(-1) A = 0.012950 B = 0.005588 C = 0.004265 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2161.638732 B = 5009.762725 C = 6564.134832 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.410 5.410 2 C 0.265 3.735 3 C -0.075 4.075 4 C 0.156 3.844 5 N -0.423 5.423 6 C 0.154 3.846 7 C 0.515 3.485 8 O -0.529 6.529 9 N -0.385 5.385 10 C -0.324 4.324 11 H 0.090 0.910 12 C 0.057 3.943 13 N -0.855 5.855 14 Si 0.924 3.076 15 H -0.273 1.273 16 H -0.283 1.283 17 H -0.268 1.268 18 C 0.174 3.826 19 C -0.130 4.130 20 C -0.139 4.139 21 C -0.135 4.135 22 C -0.138 4.138 23 C -0.012 4.012 24 C -0.060 4.060 25 Cl -0.019 7.019 26 C -0.027 4.027 27 H 0.174 0.826 28 H 0.272 0.728 29 H 0.108 0.892 30 H 0.106 0.894 31 H 0.104 0.896 32 H 0.107 0.893 33 H 0.123 0.877 34 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.299 -2.697 1.710 9.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.086 5.086 2 C -0.051 4.051 3 C -0.081 4.081 4 C -0.007 4.007 5 N -0.133 5.133 6 C 0.013 3.987 7 C 0.301 3.699 8 O -0.407 6.407 9 N -0.101 5.101 10 C -0.450 4.450 11 H 0.107 0.893 12 C -0.151 4.151 13 N -0.488 5.488 14 Si 0.749 3.251 15 H -0.198 1.198 16 H -0.208 1.208 17 H -0.193 1.193 18 C 0.084 3.916 19 C -0.149 4.149 20 C -0.157 4.157 21 C -0.154 4.154 22 C -0.157 4.157 23 C -0.032 4.032 24 C -0.091 4.091 25 Cl 0.010 6.990 26 C -0.055 4.055 27 H 0.191 0.809 28 H 0.083 0.917 29 H 0.126 0.874 30 H 0.124 0.876 31 H 0.122 0.878 32 H 0.125 0.875 33 H 0.141 0.859 34 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -10.037 -2.138 1.363 10.353 hybrid contribution 0.935 -0.315 0.617 1.163 sum -9.103 -2.453 1.980 9.633 Atomic orbital electron populations 1.81266 1.11689 1.08682 1.06928 1.25235 0.92029 0.93756 0.94095 1.17003 0.85667 1.09664 0.95785 1.23187 0.89789 0.91217 0.96485 1.68422 1.06853 1.10824 1.27164 1.22231 0.97438 0.91831 0.87158 1.17934 0.83465 0.82123 0.86347 1.90728 1.65149 1.44682 1.40130 1.40635 1.06051 1.49628 1.13800 1.19202 0.78804 1.37927 1.09103 0.89285 1.25663 1.00492 0.93317 0.95678 1.69768 1.36831 1.36240 1.05998 0.86055 0.82200 0.78610 0.78189 1.19805 1.20776 1.19275 1.17752 0.92085 0.91403 0.90356 1.21185 0.99682 0.95333 0.98725 1.20654 1.01355 0.98510 0.95228 1.20842 1.02028 0.93973 0.98521 1.20840 1.00985 0.95242 0.98616 1.21063 0.91180 1.00189 0.90792 1.21796 0.92084 1.04639 0.90545 1.98421 1.72356 1.94632 1.33587 1.21439 0.91586 0.94210 0.98276 0.80942 0.91746 0.87423 0.87609 0.87791 0.87466 0.85906 0.82721 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -5.36 18.54 41.84 0.78 -4.58 16 2 C 0.27 3.00 15.36 -22.47 -0.35 2.65 16 3 C -0.07 -0.84 5.75 -106.69 -0.61 -1.46 16 4 C 0.16 1.94 10.91 -17.14 -0.19 1.75 16 5 N -0.42 -6.99 6.96 -9.47 -0.07 -7.06 16 6 C 0.15 2.83 6.20 -82.94 -0.51 2.31 16 7 C 0.52 11.88 7.01 -12.32 -0.09 11.79 16 8 O -0.53 -13.46 15.26 5.30 0.08 -13.38 16 9 N -0.38 -9.27 2.47 -59.98 -0.15 -9.42 16 10 C -0.32 -8.42 8.66 -15.04 -0.13 -8.55 16 11 H 0.09 2.33 7.83 -52.49 -0.41 1.92 16 12 C 0.06 1.44 5.40 -17.46 -0.09 1.35 16 13 N -0.85 -21.81 10.50 55.50 0.58 -21.23 16 14 Si 0.92 19.96 29.56 -169.99 -5.02 14.94 16 15 H -0.27 -5.77 7.11 56.52 0.40 -5.37 16 16 H -0.28 -6.02 7.11 56.52 0.40 -5.62 16 17 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 18 C 0.17 3.77 2.62 -83.72 -0.22 3.55 16 19 C -0.13 -2.54 9.97 -39.37 -0.39 -2.93 16 20 C -0.14 -2.34 10.04 -39.62 -0.40 -2.74 16 21 C -0.14 -2.18 10.04 -39.53 -0.40 -2.58 16 22 C -0.14 -2.40 10.04 -39.61 -0.40 -2.80 16 23 C -0.01 -0.26 6.36 -39.36 -0.25 -0.51 16 24 C -0.06 -0.92 6.34 -38.98 -0.25 -1.17 16 25 Cl -0.02 -0.30 26.82 -51.86 -1.39 -1.69 16 26 C -0.03 -0.31 9.70 -38.85 -0.38 -0.68 16 27 H 0.17 1.65 8.06 -52.49 -0.42 1.23 16 28 H 0.27 6.64 8.31 -40.82 -0.34 6.30 16 29 H 0.11 2.06 8.06 -52.49 -0.42 1.64 16 30 H 0.11 1.51 8.06 -52.48 -0.42 1.09 16 31 H 0.10 1.38 8.06 -52.48 -0.42 0.96 16 32 H 0.11 1.62 8.06 -52.49 -0.42 1.20 16 33 H 0.12 2.81 7.54 -52.49 -0.40 2.41 16 34 H 0.16 1.33 8.06 -52.48 -0.42 0.91 16 LS Contribution 327.87 15.07 4.94 4.94 Total: -1.00 -28.92 327.87 -7.38 -36.29 By element: Atomic # 1 Polarization: 3.68 SS G_CDS: -2.48 Total: 1.20 kcal Atomic # 6 Polarization: 4.64 SS G_CDS: -4.65 Total: -0.01 kcal Atomic # 7 Polarization: -43.43 SS G_CDS: 1.14 Total: -42.29 kcal Atomic # 8 Polarization: -13.46 SS G_CDS: 0.08 Total: -13.38 kcal Atomic # 14 Polarization: 19.96 SS G_CDS: -5.02 Total: 14.94 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -1.39 Total: -1.69 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -28.92 -7.38 -36.29 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000439248923.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 115.421 kcal (2) G-P(sol) polarization free energy of solvation -28.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.506 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.293 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.128 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds