Wall clock time and date at job start Tue Mar 31 2020 15:46:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42906 * 113.99711 * 2 1 4 4 C 1.53000 * 109.46922 * 179.97438 * 3 2 1 5 5 N 1.46497 * 109.47477 * 65.00090 * 4 3 2 6 6 C 1.36929 * 120.00316 * 97.17236 * 5 4 3 7 7 H 1.08006 * 120.00072 * 165.23621 * 6 5 4 8 8 C 1.38811 * 119.99968 * 344.96616 * 6 5 4 9 9 N 1.31614 * 119.99992 * 341.59500 * 8 6 5 10 10 Si 1.86800 * 120.00182 * 161.59956 * 8 6 5 11 11 H 1.48496 * 109.47348 * 89.99566 * 10 8 6 12 12 H 1.48502 * 109.47118 * 210.00111 * 10 8 6 13 13 H 1.48509 * 109.46818 * 329.99903 * 10 8 6 14 14 C 1.46501 * 119.99519 * 277.17417 * 5 4 3 15 15 C 1.50706 * 109.47300 * 277.62217 * 14 5 4 16 16 C 1.38262 * 119.99112 * 98.50516 * 15 14 5 17 17 C 1.38216 * 120.01717 * 179.97438 * 16 15 14 18 18 C 1.38244 * 120.01050 * 359.97438 * 17 16 15 19 19 C 1.38300 * 119.98907 * 359.97438 * 18 17 16 20 20 Br 1.89102 * 120.01074 * 179.97438 * 19 18 17 21 21 C 1.38197 * 119.99493 * 278.23616 * 15 14 5 22 22 C 1.50705 * 120.00292 * 359.97438 * 21 15 14 23 23 H 1.09004 * 109.46976 * 60.00738 * 1 2 3 24 24 H 1.09007 * 109.46795 * 179.97438 * 1 2 3 25 25 H 1.09001 * 109.47630 * 300.00040 * 1 2 3 26 26 H 1.08997 * 109.47507 * 59.99480 * 3 2 1 27 27 H 1.09000 * 109.47137 * 299.99831 * 3 2 1 28 28 H 1.09001 * 109.47214 * 304.99698 * 4 3 2 29 29 H 1.09006 * 109.46977 * 185.00098 * 4 3 2 30 30 H 0.97003 * 119.99747 * 179.97438 * 9 8 6 31 31 H 1.08998 * 109.47444 * 37.62700 * 14 5 4 32 32 H 1.09002 * 109.46751 * 157.62668 * 14 5 4 33 33 H 1.07996 * 119.99371 * 359.97438 * 16 15 14 34 34 H 1.08003 * 119.99590 * 180.02562 * 17 16 15 35 35 H 1.07998 * 120.00332 * 179.97438 * 18 17 16 36 36 H 1.08993 * 109.47038 * 88.60271 * 22 21 15 37 37 H 1.09008 * 109.46599 * 208.60067 * 22 21 15 38 38 H 1.08997 * 109.47361 * 328.59734 * 22 21 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1848 0.0006 5 7 3.9767 0.5641 -1.2508 6 6 4.4081 1.3467 -2.2883 7 1 4.9511 0.9031 -3.1099 8 6 4.1428 2.7092 -2.2869 9 7 3.1949 3.1942 -1.5133 10 14 5.1309 3.8544 -3.3831 11 1 4.4607 3.9773 -4.7025 12 1 5.2209 5.1932 -2.7468 13 1 6.4969 3.3029 -3.5712 14 6 3.9564 -0.8939 -1.3923 15 6 5.1983 -1.4766 -0.7683 16 6 5.1492 -1.9992 0.5108 17 6 6.2877 -2.5342 1.0834 18 6 7.4761 -2.5474 0.3771 19 6 7.5254 -2.0256 -0.9027 20 35 9.1508 -2.0426 -1.8691 21 6 6.3847 -1.4934 -1.4768 22 6 6.4365 -0.9296 -2.8735 23 1 -0.3633 0.5137 -0.8901 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8900 26 1 1.6885 1.8465 0.8899 27 1 1.6885 1.8464 -0.8900 28 1 3.8507 0.5687 0.8427 29 1 3.9784 2.1767 0.0902 30 1 3.0097 4.1464 -1.5121 31 1 3.0755 -1.2954 -0.8913 32 1 3.9240 -1.1559 -2.4498 33 1 4.2209 -1.9895 1.0627 34 1 6.2488 -2.9427 2.0824 35 1 8.3657 -2.9650 0.8248 36 1 6.6655 0.1350 -2.8273 37 1 7.2103 -1.4433 -3.4441 38 1 5.4713 -1.0730 -3.3592 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000459540628.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:46:51 Heat of formation + Delta-G solvation = 8.280111 kcal Electronic energy + Delta-G solvation = -20787.847396 eV Core-core repulsion = 17677.678436 eV Total energy + Delta-G solvation = -3110.168959 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 327.058 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -39.22846 -37.08822 -35.36357 -32.70850 -32.44861 -30.72569 -29.24069 -28.52304 -26.74800 -25.65358 -25.14193 -22.97042 -21.20211 -21.02231 -19.71475 -16.85370 -15.99057 -15.50295 -15.22514 -15.05420 -14.56803 -14.51465 -13.93119 -13.80631 -13.16677 -13.07898 -12.83623 -12.65647 -11.97349 -11.79340 -11.54455 -11.38975 -11.14813 -11.05356 -10.81299 -10.70288 -10.50552 -10.49309 -10.41153 -9.94333 -9.82708 -9.81589 -9.60170 -8.65029 -8.45418 -8.22659 -8.14838 -6.82704 -5.79068 -3.15191 1.55422 1.75246 1.96804 3.36296 3.44546 3.46525 4.03969 4.50906 4.83309 5.15662 5.21361 5.34985 5.48840 5.57016 5.71914 5.76520 5.87849 5.94768 5.98769 6.09982 6.13640 6.26242 6.37091 6.46612 6.58120 6.61723 6.68462 6.70741 6.77818 6.83965 7.04243 7.23161 7.32416 7.49324 7.58691 7.80856 8.25997 8.34394 9.21407 9.82850 10.30833 11.25424 Molecular weight = 327.06amu Principal moments of inertia in cm(-1) A = 0.013282 B = 0.005312 C = 0.004029 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2107.608756 B = 5269.672322 C = 6948.477262 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.401 6.401 3 C 0.053 3.947 4 C 0.183 3.817 5 N -0.579 5.579 6 C -0.242 4.242 7 H 0.081 0.919 8 C -0.008 4.008 9 N -0.912 5.912 10 Si 0.899 3.101 11 H -0.290 1.290 12 H -0.291 1.291 13 H -0.280 1.280 14 C 0.179 3.821 15 C -0.076 4.076 16 C -0.095 4.095 17 C -0.130 4.130 18 C -0.105 4.105 19 C -0.096 4.096 20 Br -0.070 7.070 21 C -0.034 4.034 22 C -0.124 4.124 23 H 0.031 0.969 24 H 0.067 0.933 25 H 0.025 0.975 26 H 0.011 0.989 27 H 0.093 0.907 28 H 0.011 0.989 29 H 0.098 0.902 30 H 0.251 0.749 31 H 0.063 0.937 32 H 0.059 0.941 33 H 0.124 0.876 34 H 0.121 0.879 35 H 0.121 0.879 36 H 0.091 0.909 37 H 0.059 0.941 38 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.380 -10.551 2.770 12.163 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.320 6.320 3 C -0.025 4.025 4 C 0.057 3.943 5 N -0.299 5.299 6 C -0.371 4.371 7 H 0.099 0.901 8 C -0.203 4.203 9 N -0.559 5.559 10 Si 0.729 3.271 11 H -0.217 1.217 12 H -0.217 1.217 13 H -0.206 1.206 14 C 0.052 3.948 15 C -0.080 4.080 16 C -0.114 4.114 17 C -0.149 4.149 18 C -0.126 4.126 19 C -0.175 4.175 20 Br 0.015 6.985 21 C -0.036 4.036 22 C -0.180 4.180 23 H 0.050 0.950 24 H 0.086 0.914 25 H 0.043 0.957 26 H 0.029 0.971 27 H 0.111 0.889 28 H 0.029 0.971 29 H 0.116 0.884 30 H 0.062 0.938 31 H 0.082 0.918 32 H 0.078 0.922 33 H 0.142 0.858 34 H 0.139 0.861 35 H 0.139 0.861 36 H 0.109 0.891 37 H 0.078 0.922 38 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 6.058 -10.514 2.391 12.368 hybrid contribution -0.103 1.060 -0.103 1.070 sum 5.955 -9.454 2.287 11.405 Atomic orbital electron populations 1.22492 0.83910 1.00618 0.98877 1.87818 1.17350 1.31545 1.95323 1.23811 0.96765 0.81576 1.00306 1.20750 0.90087 0.98205 0.85278 1.43935 1.74574 0.98875 1.12472 1.19577 1.27491 0.89649 1.00425 0.90093 1.24751 0.98166 0.97722 0.99700 1.70005 1.30247 1.12467 1.43216 0.86333 0.80331 0.80641 0.79803 1.21706 1.21717 1.20566 1.19888 0.91308 0.85296 0.98301 1.21122 0.97415 0.95158 0.94319 1.21221 0.98279 0.96928 0.95015 1.21007 0.92672 1.01530 0.99657 1.20856 0.98420 1.00339 0.92947 1.21642 0.91251 1.08118 0.96518 1.96559 1.28729 1.98185 1.75036 1.19680 0.91271 0.95544 0.97151 1.21190 1.02701 1.02330 0.91826 0.94991 0.91422 0.95662 0.97074 0.88909 0.97117 0.88434 0.93806 0.91845 0.92245 0.85835 0.86121 0.86107 0.89100 0.92169 0.90575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.63 11.01 101.05 1.11 1.74 16 2 O -0.40 -8.23 8.83 -35.23 -0.31 -8.55 16 3 C 0.05 1.18 5.66 37.16 0.21 1.39 16 4 C 0.18 4.25 5.33 -4.04 -0.02 4.23 16 5 N -0.58 -13.49 2.52 -174.61 -0.44 -13.93 16 6 C -0.24 -6.08 8.87 -15.06 -0.13 -6.21 16 7 H 0.08 1.95 5.02 -52.48 -0.26 1.69 16 8 C -0.01 -0.20 4.98 -17.43 -0.09 -0.28 16 9 N -0.91 -24.22 8.39 55.49 0.47 -23.75 16 10 Si 0.90 20.98 29.59 -169.99 -5.03 15.95 16 11 H -0.29 -6.83 7.11 56.52 0.40 -6.43 16 12 H -0.29 -6.95 7.11 56.52 0.40 -6.54 16 13 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 14 C 0.18 3.62 5.21 -5.19 -0.03 3.59 16 15 C -0.08 -1.40 5.44 -104.63 -0.57 -1.97 16 16 C -0.10 -1.57 9.66 -39.58 -0.38 -1.96 16 17 C -0.13 -1.89 10.05 -39.59 -0.40 -2.29 16 18 C -0.11 -1.57 9.79 -39.56 -0.39 -1.96 16 19 C -0.10 -1.58 6.22 -39.52 -0.25 -1.83 16 20 Br -0.07 -1.02 31.76 -68.01 -2.16 -3.18 16 21 C -0.03 -0.61 5.88 -104.60 -0.62 -1.23 16 22 C -0.12 -2.18 7.67 36.01 0.28 -1.90 16 23 H 0.03 0.53 8.14 -51.93 -0.42 0.11 16 24 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 25 H 0.02 0.38 8.14 -51.93 -0.42 -0.04 16 26 H 0.01 0.24 8.14 -51.93 -0.42 -0.19 16 27 H 0.09 2.36 6.25 -51.93 -0.32 2.03 16 28 H 0.01 0.24 8.11 -51.93 -0.42 -0.18 16 29 H 0.10 2.51 6.05 -51.93 -0.31 2.20 16 30 H 0.25 6.61 8.31 -40.82 -0.34 6.27 16 31 H 0.06 1.29 6.27 -51.93 -0.33 0.96 16 32 H 0.06 1.19 6.17 -51.93 -0.32 0.87 16 33 H 0.12 1.93 8.05 -52.49 -0.42 1.51 16 34 H 0.12 1.41 8.06 -52.48 -0.42 0.99 16 35 H 0.12 1.53 8.06 -52.49 -0.42 1.11 16 36 H 0.09 1.78 6.81 -51.93 -0.35 1.43 16 37 H 0.06 0.94 6.59 -51.92 -0.34 0.60 16 38 H 0.08 1.34 5.59 -51.93 -0.29 1.05 16 LS Contribution 320.07 15.07 4.82 4.82 Total: -1.00 -26.48 320.07 -8.97 -35.45 By element: Atomic # 1 Polarization: 6.91 SS G_CDS: -5.05 Total: 1.86 kcal Atomic # 6 Polarization: -7.41 SS G_CDS: -1.27 Total: -8.68 kcal Atomic # 7 Polarization: -37.70 SS G_CDS: 0.03 Total: -37.68 kcal Atomic # 8 Polarization: -8.23 SS G_CDS: -0.31 Total: -8.55 kcal Atomic # 14 Polarization: 20.98 SS G_CDS: -5.03 Total: 15.95 kcal Atomic # 35 Polarization: -1.02 SS G_CDS: -2.16 Total: -3.18 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -26.48 -8.97 -35.45 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000459540628.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.730 kcal (2) G-P(sol) polarization free energy of solvation -26.481 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.969 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.450 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.280 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds