Wall clock time and date at job start Tue Mar 31 2020 15:23:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 C 1.39713 * 120.01663 * 290.36405 * 3 2 1 5 5 C 1.37667 * 120.01166 * 180.23264 * 4 3 2 6 6 C 1.39685 * 120.03720 * 359.49663 * 5 4 3 7 7 C 1.47883 * 119.98635 * 180.27956 * 6 5 4 8 8 O 1.21548 * 119.99764 * 359.97438 * 7 6 5 9 9 N 1.34773 * 120.00060 * 180.02562 * 7 6 5 10 10 C 1.39378 * 119.99968 * 174.95964 * 9 7 6 11 11 C 1.38621 * 119.57913 * 185.36810 * 10 9 7 12 12 C 1.40811 * 118.78802 * 179.97438 * 11 10 9 13 13 C 1.41549 * 120.99018 * 179.97438 * 12 11 10 14 14 H 1.08000 * 119.99456 * 151.71354 * 13 12 11 15 15 C 1.40025 * 120.00130 * 331.71130 * 13 12 11 16 16 N 1.30739 * 120.00281 * 350.22041 * 15 13 12 17 17 Si 1.86804 * 120.00089 * 170.21712 * 15 13 12 18 18 H 1.48501 * 109.46758 * 60.00309 * 17 15 13 19 19 H 1.48499 * 109.47064 * 179.97438 * 17 15 13 20 20 H 1.48493 * 109.47331 * 300.00679 * 17 15 13 21 21 C 1.41175 * 118.01207 * 359.97438 * 12 11 10 22 22 C 1.37583 * 119.01806 * 359.97438 * 21 12 11 23 23 N 1.32079 * 121.11483 * 359.74824 * 22 21 12 24 24 C 1.39580 * 120.03279 * 0.25362 * 6 5 4 25 25 C 1.37915 * 119.98334 * 359.97438 * 24 6 5 26 26 Cl 1.73598 * 120.02018 * 180.02562 * 25 24 6 27 27 H 1.08003 * 119.99469 * 0.02562 * 4 3 2 28 28 H 1.08003 * 119.98293 * 179.77944 * 5 4 3 29 29 H 0.97002 * 120.00354 * 354.95276 * 9 7 6 30 30 H 1.08001 * 120.60949 * 0.02562 * 11 10 9 31 31 H 0.97002 * 120.00067 * 179.97438 * 16 15 13 32 32 H 1.07998 * 120.49116 * 180.02562 * 21 12 11 33 33 H 1.08007 * 119.44434 * 179.97438 * 22 21 12 34 34 H 1.07992 * 120.00861 * 179.97438 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2672 -0.4200 1.1341 5 6 4.6438 -0.4148 1.1357 6 6 5.3428 0.0009 0.0000 7 6 6.8216 0.0002 0.0008 8 8 7.4286 -0.3617 0.9897 9 7 7.4962 0.4018 -1.0946 10 6 8.8860 0.5014 -1.0595 11 6 9.5626 1.0210 -2.1522 12 6 10.9666 1.1146 -2.0986 13 6 11.7042 1.6371 -3.1878 14 1 12.6521 2.1246 -3.0137 15 6 11.2051 1.5219 -4.4910 16 7 10.1614 0.7709 -4.7273 17 14 12.0305 2.4414 -5.8920 18 1 13.4437 2.0003 -6.0088 19 1 11.3162 2.1537 -7.1617 20 1 11.9884 3.9005 -5.6193 21 6 11.6164 0.6717 -0.9262 22 6 10.8593 0.1714 0.1080 23 7 9.5431 0.1054 0.0206 24 6 4.6461 0.4166 -1.1358 25 6 3.2669 0.4163 -1.1370 26 17 2.3995 0.9325 -2.5493 27 1 2.7275 -0.7462 2.0110 28 1 5.1838 -0.7367 2.0139 29 1 7.0147 0.6214 -1.9075 30 1 9.0227 1.3488 -3.0283 31 1 9.8154 0.6914 -5.6301 32 1 12.6917 0.7255 -0.8420 33 1 11.3494 -0.1697 1.0080 34 1 5.1868 0.7384 -2.0135 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000547959245.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:23:54 Heat of formation + Delta-G solvation = 55.797665 kcal Electronic energy + Delta-G solvation = -23005.151566 eV Core-core repulsion = 19315.239385 eV Total energy + Delta-G solvation = -3689.912182 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 327.052 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -40.53609 -39.22310 -37.86089 -36.91502 -36.62694 -34.54644 -33.93222 -32.07117 -31.29137 -30.60768 -28.72842 -26.09029 -25.37794 -23.27737 -22.16746 -21.79452 -20.15518 -19.53346 -18.02591 -17.76992 -16.43339 -15.83705 -15.42863 -15.29141 -15.05438 -14.72617 -14.48427 -14.45003 -14.28806 -13.97121 -13.65263 -13.16929 -13.14067 -12.95361 -12.69067 -12.59983 -12.48490 -11.84349 -11.81366 -11.49081 -11.46739 -11.26848 -10.98636 -10.39991 -10.25965 -9.91266 -9.72538 -9.52798 -9.46406 -9.24152 -8.05784 -7.88047 -7.17204 -6.84391 -4.70271 -0.07105 0.67158 1.54815 2.13551 2.25306 2.62879 2.73978 2.97800 3.00388 3.10787 3.22088 3.25196 3.37200 3.68065 3.80859 4.18917 4.47937 4.61927 4.68113 4.82820 4.85055 5.19233 5.41380 5.55910 5.62467 5.76379 5.93569 6.08424 6.43803 6.50648 6.69978 6.84856 7.03152 7.04966 7.24945 7.33485 7.61000 7.81690 8.06562 8.29322 8.55384 8.65524 8.69467 9.53929 10.03551 Molecular weight = 327.05amu Principal moments of inertia in cm(-1) A = 0.015184 B = 0.003033 C = 0.002546 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1843.598628 B = 9228.099424 C =10995.117634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.397 5.397 2 C 0.251 3.749 3 C -0.005 4.005 4 C -0.064 4.064 5 C -0.059 4.059 6 C -0.078 4.078 7 C 0.538 3.462 8 O -0.465 6.465 9 N -0.648 5.648 10 C 0.332 3.668 11 C -0.233 4.233 12 C 0.143 3.857 13 C -0.456 4.456 14 H 0.082 0.918 15 C 0.077 3.923 16 N -0.795 5.795 17 Si 0.915 3.085 18 H -0.264 1.264 19 H -0.277 1.277 20 H -0.263 1.263 21 C -0.278 4.278 22 C 0.118 3.882 23 N -0.552 5.552 24 C -0.082 4.082 25 C -0.001 4.001 26 Cl -0.046 7.046 27 H 0.150 0.850 28 H 0.157 0.843 29 H 0.408 0.592 30 H 0.131 0.869 31 H 0.282 0.718 32 H 0.104 0.896 33 H 0.126 0.874 34 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.640 -0.247 3.497 12.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.072 5.072 2 C -0.065 4.065 3 C -0.010 4.010 4 C -0.084 4.084 5 C -0.078 4.078 6 C -0.082 4.082 7 C 0.322 3.678 8 O -0.335 6.335 9 N -0.294 5.294 10 C 0.107 3.893 11 C -0.258 4.258 12 C 0.135 3.865 13 C -0.487 4.487 14 H 0.100 0.900 15 C -0.142 4.142 16 N -0.421 5.421 17 Si 0.739 3.261 18 H -0.189 1.189 19 H -0.202 1.202 20 H -0.188 1.188 21 C -0.301 4.301 22 C -0.036 4.036 23 N -0.271 5.271 24 C -0.101 4.101 25 C -0.030 4.030 26 Cl -0.016 7.016 27 H 0.168 0.832 28 H 0.174 0.826 29 H 0.245 0.755 30 H 0.148 0.852 31 H 0.093 0.907 32 H 0.122 0.878 33 H 0.143 0.857 34 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -13.726 -0.882 4.634 14.514 hybrid contribution 0.938 0.844 -2.184 2.522 sum -12.787 -0.038 2.451 13.020 Atomic orbital electron populations 1.81248 1.11667 1.07513 1.06739 1.25360 0.92339 0.94436 0.94326 1.15922 0.84836 1.05285 0.94920 1.21171 0.93915 0.96884 0.96480 1.21364 0.92984 0.95164 0.98318 1.20457 0.94452 0.99177 0.94151 1.18133 0.85813 0.79597 0.84239 1.90890 1.68345 1.42146 1.32134 1.43298 1.05876 1.65804 1.14433 1.18118 0.82013 0.97020 0.92111 1.21610 0.95161 1.10614 0.98404 1.17585 0.90907 0.86706 0.91324 1.19543 1.05629 1.33186 0.90335 0.90012 1.25930 0.94382 0.93349 1.00522 1.69718 1.20219 1.29006 1.23203 0.86257 0.80145 0.80672 0.79049 1.18897 1.20229 1.18756 1.21969 0.99175 1.11074 0.97907 1.21771 0.88674 0.96237 0.96966 1.67186 1.09569 1.25262 1.25112 1.21257 0.91449 0.98367 0.99062 1.20790 0.92321 1.01273 0.88643 1.98426 1.76157 1.88768 1.38281 0.83230 0.82560 0.75534 0.85174 0.90652 0.87808 0.85688 0.83229 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -4.85 18.54 41.84 0.78 -4.07 16 2 C 0.25 2.59 14.36 -22.47 -0.32 2.27 16 3 C -0.01 -0.05 5.74 -106.84 -0.61 -0.66 16 4 C -0.06 -0.48 9.73 -39.24 -0.38 -0.86 16 5 C -0.06 -0.56 9.57 -39.25 -0.38 -0.94 16 6 C -0.08 -0.90 5.88 -104.91 -0.62 -1.52 16 7 C 0.54 8.92 7.73 -12.31 -0.10 8.82 16 8 O -0.46 -9.45 14.58 5.32 0.08 -9.37 16 9 N -0.65 -11.39 5.33 -12.34 -0.07 -11.46 16 10 C 0.33 7.45 7.41 -154.77 -1.15 6.30 16 11 C -0.23 -5.52 8.59 -38.47 -0.33 -5.85 16 12 C 0.14 3.57 5.58 -106.55 -0.59 2.97 16 13 C -0.46 -11.17 9.13 -37.65 -0.34 -11.52 16 14 H 0.08 1.92 7.87 -52.49 -0.41 1.51 16 15 C 0.08 1.76 5.30 -17.35 -0.09 1.67 16 16 N -0.80 -18.67 10.83 55.55 0.60 -18.07 16 17 Si 0.91 17.28 29.57 -169.99 -5.03 12.25 16 18 H -0.26 -4.99 7.11 56.52 0.40 -4.59 16 19 H -0.28 -5.12 7.11 56.52 0.40 -4.72 16 20 H -0.26 -4.94 7.11 56.52 0.40 -4.54 16 21 C -0.28 -6.44 9.90 -38.71 -0.38 -6.82 16 22 C 0.12 2.65 11.15 -17.68 -0.20 2.46 16 23 N -0.55 -13.13 7.85 -12.54 -0.10 -13.23 16 24 C -0.08 -0.81 9.30 -39.20 -0.36 -1.17 16 25 C 0.00 -0.01 6.34 -39.12 -0.25 -0.26 16 26 Cl -0.05 -0.45 28.01 -51.86 -1.45 -1.90 16 27 H 0.15 0.72 8.06 -52.48 -0.42 0.30 16 28 H 0.16 1.42 7.64 -52.48 -0.40 1.02 16 29 H 0.41 5.77 6.73 -40.82 -0.27 5.49 16 30 H 0.13 3.05 6.27 -52.49 -0.33 2.73 16 31 H 0.28 6.04 8.29 -40.82 -0.34 5.70 16 32 H 0.10 2.21 8.06 -52.49 -0.42 1.78 16 33 H 0.13 2.44 8.06 -52.48 -0.42 2.02 16 34 H 0.15 1.29 6.39 -52.49 -0.34 0.95 16 LS Contribution 329.09 15.07 4.96 4.96 Total: -1.00 -29.85 329.09 -8.49 -38.34 By element: Atomic # 1 Polarization: 9.81 SS G_CDS: -2.16 Total: 7.65 kcal Atomic # 6 Polarization: 1.00 SS G_CDS: -6.11 Total: -5.11 kcal Atomic # 7 Polarization: -48.05 SS G_CDS: 1.21 Total: -46.83 kcal Atomic # 8 Polarization: -9.45 SS G_CDS: 0.08 Total: -9.37 kcal Atomic # 14 Polarization: 17.28 SS G_CDS: -5.03 Total: 12.25 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -1.45 Total: -1.90 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -29.85 -8.49 -38.34 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000547959245.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.141 kcal (2) G-P(sol) polarization free energy of solvation -29.853 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.288 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.490 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.343 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.798 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds