Wall clock time and date at job start Tue Mar 31 2020 14:30:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35528 * 116.99975 * 2 1 4 4 N 1.32747 * 120.47082 * 0.23310 * 3 2 1 5 5 C 1.32461 * 120.65712 * 180.27911 * 4 3 2 6 6 N 1.38444 * 119.17629 * 179.76153 * 5 4 3 7 7 C 1.46502 * 119.99635 * 179.72597 * 6 5 4 8 8 C 1.52999 * 109.47087 * 186.35262 * 7 6 5 9 9 C 1.50700 * 115.55966 * 40.02536 * 8 7 6 10 10 H 1.08004 * 120.00176 * 260.47270 * 9 8 7 11 11 C 1.37877 * 120.00254 * 80.47166 * 9 8 7 12 12 N 1.31518 * 119.99919 * 354.32912 * 11 9 8 13 13 Si 1.86797 * 120.00057 * 174.32474 * 11 9 8 14 14 H 1.48495 * 109.47391 * 0.02562 * 13 11 9 15 15 H 1.48503 * 109.47046 * 120.00099 * 13 11 9 16 16 H 1.48500 * 109.47377 * 240.00051 * 13 11 9 17 17 C 1.52996 * 117.49969 * 185.71022 * 8 7 6 18 18 C 1.53006 * 60.03221 * 107.47937 * 17 8 7 19 19 N 1.32468 * 121.64133 * 359.48065 * 5 4 3 20 20 C 1.32447 * 120.89605 * 0.25544 * 19 5 4 21 21 C 1.38300 * 119.25199 * 0.02562 * 20 19 5 22 22 Br 1.89102 * 120.75060 * 179.97438 * 21 20 19 23 23 H 1.09002 * 109.46566 * 299.99734 * 1 2 3 24 24 H 1.08998 * 109.47431 * 59.99584 * 1 2 3 25 25 H 1.08997 * 109.46916 * 180.02562 * 1 2 3 26 26 H 0.96996 * 120.00509 * 359.72543 * 6 5 4 27 27 H 1.08996 * 109.46915 * 66.35579 * 7 6 5 28 28 H 1.09003 * 109.47213 * 306.35352 * 7 6 5 29 29 H 0.96995 * 119.99857 * 185.02506 * 12 11 9 30 30 H 1.08996 * 117.49725 * 214.97905 * 17 8 7 31 31 H 1.09004 * 117.49818 * 359.97438 * 17 8 7 32 32 H 1.08994 * 117.49627 * 107.49887 * 18 17 8 33 33 H 1.08997 * 117.49957 * 252.52555 * 18 17 8 34 34 H 1.07996 * 120.37358 * 180.02562 * 20 19 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0443 1.2076 0.0000 4 7 1.3305 2.3268 0.0047 5 6 1.9279 3.5090 -0.0009 6 7 1.1535 4.6566 -0.0008 7 6 1.7956 5.9734 -0.0008 8 6 0.7305 7.0601 0.1589 9 6 -0.3753 6.7484 1.1341 10 1 -1.3288 6.3915 0.7735 11 6 -0.1699 6.9187 2.4868 12 7 1.0227 7.2454 2.9348 13 14 -1.5854 6.6855 3.6832 14 1 -2.8138 6.3226 2.9319 15 1 -1.2516 5.5995 4.6394 16 1 -1.8161 7.9486 4.4294 17 6 1.1853 8.5167 0.0486 18 6 0.3694 7.8832 -1.0802 19 7 3.2479 3.6205 -0.0009 20 6 4.0213 2.5452 -0.0005 21 6 3.4363 1.2921 -0.0005 22 35 4.4999 -0.2715 -0.0006 23 1 -0.3632 0.5138 0.8901 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 -1.0276 0.0005 26 1 0.1859 4.5888 -0.0008 27 1 2.3252 6.1193 -0.9422 28 1 2.5024 6.0330 0.8268 29 1 1.1855 7.2939 3.8898 30 1 0.6847 9.2495 0.6813 31 1 2.2435 8.7009 -0.1373 32 1 -0.6679 8.1993 -1.1899 33 1 0.8908 7.6502 -2.0085 34 1 5.0965 2.6460 -0.0002 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000619527700.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:30:14 Heat of formation + Delta-G solvation = 46.876287 kcal Electronic energy + Delta-G solvation = -19696.927266 eV Core-core repulsion = 16484.891619 eV Total energy + Delta-G solvation = -3212.035647 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 327.032 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.88023 -38.50890 -37.09783 -34.56544 -32.89214 -32.09629 -31.78862 -28.97229 -27.38332 -26.04721 -25.30710 -23.62350 -22.31412 -21.21505 -19.49953 -18.39533 -18.03828 -16.18675 -16.12370 -15.86054 -14.89453 -14.85010 -14.66971 -14.43907 -14.16674 -13.59999 -13.25563 -12.94519 -12.49351 -12.00065 -11.68042 -11.58546 -11.26003 -11.09043 -10.97003 -10.72534 -10.58762 -10.32402 -10.29783 -10.05290 -9.67976 -9.21506 -9.00403 -8.92891 -8.59772 -8.25240 -7.47616 -6.17666 -4.27013 1.29811 1.46211 1.84247 2.90608 3.19260 3.29030 3.30832 3.45784 4.09243 4.28165 4.36984 4.96292 5.02433 5.14094 5.23933 5.24492 5.32544 5.36441 5.64270 5.93871 6.07687 6.21031 6.40729 6.44127 6.63564 6.79304 6.97757 6.99664 7.14730 7.25364 7.34551 7.60118 7.72541 8.01982 8.23559 8.72400 8.75118 9.41355 10.90004 Molecular weight = 327.03amu Principal moments of inertia in cm(-1) A = 0.018371 B = 0.003661 C = 0.003416 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1523.759422 B = 7646.574424 C = 8194.145005 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.293 6.293 3 C 0.432 3.568 4 N -0.623 5.623 5 C 0.608 3.392 6 N -0.641 5.641 7 C 0.175 3.825 8 C 0.025 3.975 9 C -0.505 4.505 10 H 0.061 0.939 11 C 0.079 3.921 12 N -0.869 5.869 13 Si 0.888 3.112 14 H -0.271 1.271 15 H -0.284 1.284 16 H -0.282 1.282 17 C -0.152 4.152 18 C -0.210 4.210 19 N -0.577 5.577 20 C 0.253 3.747 21 C -0.303 4.303 22 Br -0.038 7.038 23 H 0.064 0.936 24 H 0.062 0.938 25 H 0.097 0.903 26 H 0.420 0.580 27 H 0.040 0.960 28 H 0.078 0.922 29 H 0.262 0.738 30 H 0.082 0.918 31 H 0.066 0.934 32 H 0.078 0.922 33 H 0.067 0.933 34 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.184 -13.493 -6.262 15.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.196 6.196 3 C 0.239 3.761 4 N -0.365 5.365 5 C 0.251 3.749 6 N -0.270 5.270 7 C 0.051 3.949 8 C 0.025 3.975 9 C -0.543 4.543 10 H 0.080 0.920 11 C -0.126 4.126 12 N -0.505 5.505 13 Si 0.716 3.284 14 H -0.196 1.196 15 H -0.210 1.210 16 H -0.208 1.208 17 C -0.190 4.190 18 C -0.247 4.247 19 N -0.304 5.304 20 C 0.082 3.918 21 C -0.393 4.393 22 Br 0.044 6.956 23 H 0.082 0.918 24 H 0.081 0.919 25 H 0.116 0.884 26 H 0.260 0.740 27 H 0.058 0.942 28 H 0.096 0.904 29 H 0.072 0.928 30 H 0.101 0.899 31 H 0.085 0.915 32 H 0.097 0.903 33 H 0.085 0.915 34 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges 5.164 -13.120 -6.082 15.356 hybrid contribution -1.092 -0.401 0.871 1.453 sum 4.072 -13.521 -5.212 15.052 Atomic orbital electron populations 1.22950 0.76723 1.03025 1.03131 1.86299 1.23286 1.23659 1.86360 1.19248 0.87611 0.84673 0.84541 1.67589 1.40163 0.97572 1.31177 1.19181 0.85471 0.85273 0.84977 1.44705 1.09099 1.01828 1.71369 1.21005 0.95035 0.79387 0.99459 1.19065 0.95826 0.88545 0.94096 1.20343 0.97418 1.46435 0.90072 0.92042 1.24965 0.95490 0.93898 0.98294 1.69967 1.20601 1.45896 1.14013 0.86599 0.82776 0.77831 0.81222 1.19599 1.21043 1.20824 1.22539 0.97164 0.98804 1.00496 1.23088 0.99724 1.09278 0.92599 1.68203 1.04237 1.32143 1.25809 1.22774 1.00125 0.84497 0.84369 1.21956 0.92077 0.94970 1.30289 1.96558 1.67238 1.33326 1.98482 0.91768 0.91913 0.88439 0.74020 0.94228 0.90359 0.92825 0.89901 0.91513 0.90325 0.91472 0.80831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.43 10.41 101.05 1.05 1.48 16 2 O -0.29 -4.28 9.93 -18.28 -0.18 -4.46 16 3 C 0.43 7.14 7.52 -16.70 -0.13 7.02 16 4 N -0.62 -11.35 9.40 -13.97 -0.13 -11.49 16 5 C 0.61 11.83 8.43 -322.83 -2.72 9.11 16 6 N -0.64 -13.01 5.42 -62.31 -0.34 -13.35 16 7 C 0.17 3.72 5.74 -4.04 -0.02 3.70 16 8 C 0.03 0.57 1.63 -155.62 -0.25 0.32 16 9 C -0.51 -12.54 7.51 -34.44 -0.26 -12.80 16 10 H 0.06 1.52 7.82 -52.48 -0.41 1.11 16 11 C 0.08 2.03 5.42 -17.82 -0.10 1.93 16 12 N -0.87 -23.41 13.11 55.43 0.73 -22.68 16 13 Si 0.89 20.27 29.54 -169.99 -5.02 15.25 16 14 H -0.27 -6.10 7.11 56.52 0.40 -5.69 16 15 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 16 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 17 C -0.15 -3.30 9.71 -26.73 -0.26 -3.56 16 18 C -0.21 -4.20 9.89 -26.69 -0.26 -4.47 16 19 N -0.58 -10.64 9.55 -13.97 -0.13 -10.77 16 20 C 0.25 3.86 11.07 -17.26 -0.19 3.67 16 21 C -0.30 -4.63 6.28 -39.10 -0.25 -4.88 16 22 Br -0.04 -0.49 33.30 -68.01 -2.26 -2.75 16 23 H 0.06 0.79 8.12 -51.93 -0.42 0.37 16 24 H 0.06 0.73 8.12 -51.93 -0.42 0.30 16 25 H 0.10 0.81 8.14 -51.93 -0.42 0.39 16 26 H 0.42 8.56 7.71 -40.82 -0.31 8.24 16 27 H 0.04 0.79 7.95 -51.93 -0.41 0.38 16 28 H 0.08 1.88 8.10 -51.93 -0.42 1.46 16 29 H 0.26 6.84 8.32 -40.82 -0.34 6.50 16 30 H 0.08 1.92 8.14 -51.93 -0.42 1.49 16 31 H 0.07 1.36 8.14 -51.93 -0.42 0.94 16 32 H 0.08 1.56 8.14 -51.93 -0.42 1.14 16 33 H 0.07 1.22 8.09 -51.93 -0.42 0.80 16 34 H 0.17 2.04 8.06 -52.49 -0.42 1.61 16 LS Contribution 320.00 15.07 4.82 4.82 Total: -1.00 -27.14 320.00 -9.98 -37.12 By element: Atomic # 1 Polarization: 10.85 SS G_CDS: -4.07 Total: 6.78 kcal Atomic # 6 Polarization: 4.92 SS G_CDS: -3.39 Total: 1.53 kcal Atomic # 7 Polarization: -58.41 SS G_CDS: 0.12 Total: -58.29 kcal Atomic # 8 Polarization: -4.28 SS G_CDS: -0.18 Total: -4.46 kcal Atomic # 14 Polarization: 20.27 SS G_CDS: -5.02 Total: 15.25 kcal Atomic # 35 Polarization: -0.49 SS G_CDS: -2.26 Total: -2.75 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -27.14 -9.98 -37.12 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000619527700.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.994 kcal (2) G-P(sol) polarization free energy of solvation -27.140 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.978 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.118 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.876 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds