Wall clock time and date at job start Tue Mar 31 2020 15:12:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39968 * 120.47414 * 30.40127 * 3 2 1 5 5 C 1.38340 * 118.37080 * 179.70811 * 4 3 2 6 6 C 1.39390 * 119.23965 * 0.51123 * 5 4 3 7 7 C 1.48144 * 119.55457 * 179.75088 * 6 5 4 8 8 O 1.21518 * 119.99958 * 359.72786 * 7 6 5 9 9 N 1.34775 * 119.99815 * 180.02562 * 7 6 5 10 10 C 1.39081 * 119.99939 * 176.41336 * 9 7 6 11 11 C 1.39531 * 119.83524 * 217.58891 * 10 9 7 12 12 C 1.36348 * 120.16513 * 179.75545 * 11 10 9 13 13 C 1.40894 * 119.83005 * 0.53588 * 12 11 10 14 14 C 1.41120 * 120.16132 * 179.69268 * 13 12 11 15 15 H 1.07996 * 120.00007 * 157.91573 * 14 13 12 16 16 C 1.39929 * 119.99763 * 337.92269 * 14 13 12 17 17 N 1.30857 * 119.99969 * 327.58578 * 16 14 13 18 18 Si 1.86798 * 119.99757 * 147.59507 * 16 14 13 19 19 H 1.48502 * 109.47189 * 94.98377 * 18 16 14 20 20 H 1.48501 * 109.47279 * 214.98108 * 18 16 14 21 21 H 1.48496 * 109.47397 * 334.98545 * 18 16 14 22 22 C 1.40892 * 119.67940 * 359.72050 * 13 12 11 23 23 C 1.36356 * 119.82984 * 359.97438 * 22 13 12 24 24 N 1.32791 * 120.88852 * 359.47980 * 6 5 4 25 25 C 1.31479 * 121.78011 * 0.26861 * 24 6 5 26 26 Cl 1.73604 * 119.66876 * 180.02562 * 25 24 6 27 27 H 1.07996 * 120.81050 * 359.97438 * 4 3 2 28 28 H 1.08004 * 120.37902 * 180.28441 * 5 4 3 29 29 H 0.96997 * 120.00581 * 356.40571 * 9 7 6 30 30 H 1.08004 * 119.91637 * 0.02562 * 11 10 9 31 31 H 1.07997 * 120.08685 * 180.23223 * 12 11 10 32 32 H 0.96998 * 119.99693 * 179.97438 * 17 16 14 33 33 H 1.07997 * 120.08421 * 179.97438 * 22 13 12 34 34 H 1.07993 * 119.91399 * 180.02562 * 23 22 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2783 -1.0395 -0.6105 5 6 4.6607 -0.9920 -0.5901 6 6 5.2961 0.0758 0.0418 7 6 6.7762 0.1308 0.0726 8 8 7.4280 -0.7537 -0.4466 9 7 7.3997 1.1588 0.6816 10 6 8.7873 1.1730 0.7758 11 6 9.3996 1.6615 1.9305 12 6 10.7593 1.6739 2.0320 13 6 11.5463 1.2023 0.9628 14 6 12.9542 1.2180 1.0579 15 1 13.5447 0.5596 0.4381 16 6 13.5851 2.0865 1.9555 17 7 13.0514 3.2507 2.2242 18 14 15.1894 1.5841 2.7699 19 1 16.3312 2.1276 1.9914 20 1 15.2323 2.1228 4.1531 21 1 15.2801 0.1025 2.8127 22 6 10.9209 0.7155 -0.2020 23 6 9.5600 0.7034 -0.2868 24 7 4.5925 1.0470 0.6119 25 6 3.2777 1.0421 0.6104 26 17 2.4127 2.3406 1.3718 27 1 2.7598 -1.8569 -1.0894 28 1 5.2411 -1.7751 -1.0553 29 1 6.8809 1.8888 1.0540 30 1 8.7951 2.0267 2.7475 31 1 11.2318 2.0489 2.9278 32 1 13.4886 3.8525 2.8467 33 1 11.5178 0.3528 -1.0257 34 1 9.0792 0.3302 -1.1788 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000753003645.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:12:43 Heat of formation + Delta-G solvation = 51.116249 kcal Electronic energy + Delta-G solvation = -22732.580084 eV Core-core repulsion = 19042.464901 eV Total energy + Delta-G solvation = -3690.115183 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 327.052 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.16422 -39.42695 -37.46107 -37.11038 -36.99511 -34.68097 -33.61871 -32.93131 -31.92279 -29.65128 -29.14571 -26.45433 -24.68381 -24.22374 -22.01090 -21.04792 -20.15216 -19.81820 -18.18900 -17.73818 -17.38390 -16.31715 -15.73748 -15.67696 -15.26531 -14.82588 -14.61008 -14.22022 -14.08081 -13.87971 -13.65615 -13.44941 -13.14299 -12.85514 -12.68153 -12.20583 -12.15342 -12.05047 -11.82173 -11.53401 -11.20492 -11.04113 -10.63102 -10.60788 -10.56931 -10.24067 -9.83482 -9.67129 -9.55076 -9.21291 -8.79312 -7.62489 -7.23839 -6.96620 -4.34566 -0.37683 0.44649 1.13392 2.03378 2.08887 2.59317 2.88723 3.00776 3.01921 3.03610 3.07103 3.16409 3.31179 3.56954 3.77953 3.83437 4.17793 4.40005 4.43373 4.53788 4.79146 5.20781 5.33966 5.60036 5.70892 6.14564 6.33343 6.65906 6.76812 6.88076 6.91986 6.97240 7.04882 7.19661 7.48858 7.59395 7.76011 7.94249 8.15260 8.17730 8.45131 8.57042 8.75741 8.90146 9.93617 Molecular weight = 327.05amu Principal moments of inertia in cm(-1) A = 0.029659 B = 0.002324 C = 0.002188 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 943.835911 B =12046.024095 C =12792.779062 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.386 5.386 2 C 0.253 3.747 3 C -0.053 4.053 4 C -0.017 4.017 5 C -0.113 4.113 6 C 0.144 3.856 7 C 0.543 3.457 8 O -0.518 6.518 9 N -0.613 5.613 10 C -0.034 4.034 11 C -0.094 4.094 12 C -0.172 4.172 13 C 0.115 3.885 14 C -0.460 4.460 15 H 0.084 0.916 16 C 0.087 3.913 17 N -0.764 5.764 18 Si 0.897 3.103 19 H -0.269 1.269 20 H -0.273 1.273 21 H -0.257 1.257 22 C -0.225 4.225 23 C -0.061 4.061 24 N -0.451 5.451 25 C 0.218 3.782 26 Cl -0.006 7.006 27 H 0.164 0.836 28 H 0.171 0.829 29 H 0.406 0.594 30 H 0.092 0.908 31 H 0.108 0.892 32 H 0.285 0.715 33 H 0.096 0.904 34 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.870 -3.764 -1.990 16.431 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.061 5.061 2 C -0.064 4.064 3 C -0.060 4.060 4 C -0.044 4.044 5 C -0.134 4.134 6 C 0.005 3.995 7 C 0.327 3.673 8 O -0.395 6.395 9 N -0.254 5.254 10 C -0.126 4.126 11 C -0.114 4.114 12 C -0.192 4.192 13 C 0.112 3.888 14 C -0.487 4.487 15 H 0.102 0.898 16 C -0.136 4.136 17 N -0.386 5.386 18 Si 0.720 3.280 19 H -0.194 1.194 20 H -0.198 1.198 21 H -0.180 1.180 22 C -0.245 4.245 23 C -0.081 4.081 24 N -0.164 5.164 25 C 0.048 3.952 26 Cl 0.023 6.977 27 H 0.181 0.819 28 H 0.188 0.812 29 H 0.242 0.758 30 H 0.110 0.890 31 H 0.126 0.874 32 H 0.096 0.904 33 H 0.114 0.886 34 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -16.725 -3.343 -1.757 17.146 hybrid contribution 0.334 -0.093 0.406 0.534 sum -16.391 -3.436 -1.350 16.802 Atomic orbital electron populations 1.81274 1.11371 1.06429 1.07022 1.25033 0.91927 0.94730 0.94692 1.16678 0.86048 0.97856 1.05458 1.21732 0.93601 0.95810 0.93290 1.22238 0.94076 0.99288 0.97807 1.21733 0.95228 0.89826 0.92722 1.17654 0.84476 0.83140 0.82031 1.90817 1.64491 1.38340 1.45828 1.42768 1.06812 1.21363 1.54493 1.17033 0.79637 1.18013 0.97909 1.20181 0.95218 1.01430 0.94581 1.20631 0.91654 1.07367 0.99517 1.17626 0.93250 0.88049 0.89900 1.19559 0.91959 1.18335 1.18841 0.89830 1.25982 0.99543 0.93184 0.94854 1.69932 1.38721 1.04778 1.25205 0.86482 0.81412 0.80975 0.79093 1.19393 1.19815 1.18009 1.20587 0.93220 1.12253 0.98445 1.20291 0.93674 0.98100 0.95999 1.67073 1.05923 1.26397 1.17050 1.21655 0.89362 0.89750 0.94432 1.98464 1.72777 1.47264 1.79226 0.81860 0.81169 0.75817 0.89020 0.87372 0.90420 0.88577 0.87848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -4.22 18.54 41.84 0.78 -3.44 16 2 C 0.25 2.30 14.41 -22.47 -0.32 1.98 16 3 C -0.05 -0.44 5.75 -106.65 -0.61 -1.05 16 4 C -0.02 -0.10 9.89 -38.90 -0.38 -0.49 16 5 C -0.11 -0.98 9.61 -39.11 -0.38 -1.35 16 6 C 0.14 1.73 6.75 -82.96 -0.56 1.17 16 7 C 0.54 8.78 7.62 -12.19 -0.09 8.69 16 8 O -0.52 -9.81 13.92 5.35 0.07 -9.73 16 9 N -0.61 -10.62 5.28 -10.51 -0.06 -10.68 16 10 C -0.03 -0.72 6.25 -83.61 -0.52 -1.24 16 11 C -0.09 -2.08 9.90 -39.78 -0.39 -2.47 16 12 C -0.17 -4.23 8.74 -39.26 -0.34 -4.58 16 13 C 0.11 2.95 5.57 -106.79 -0.60 2.35 16 14 C -0.46 -11.68 8.94 -37.86 -0.34 -12.02 16 15 H 0.08 2.05 8.02 -52.49 -0.42 1.63 16 16 C 0.09 2.07 4.77 -17.33 -0.08 1.99 16 17 N -0.76 -18.64 11.78 55.55 0.65 -17.98 16 18 Si 0.90 17.56 29.66 -169.99 -5.04 12.52 16 19 H -0.27 -5.17 7.11 56.52 0.40 -4.77 16 20 H -0.27 -5.22 7.11 56.52 0.40 -4.82 16 21 H -0.26 -5.05 7.11 56.52 0.40 -4.65 16 22 C -0.23 -5.47 9.74 -39.26 -0.38 -5.85 16 23 C -0.06 -1.39 8.59 -39.78 -0.34 -1.73 16 24 N -0.45 -5.24 9.50 -6.61 -0.06 -5.30 16 25 C 0.22 2.19 7.31 -17.03 -0.12 2.06 16 26 Cl -0.01 -0.06 28.18 -51.86 -1.46 -1.52 16 27 H 0.16 0.47 8.06 -52.49 -0.42 0.05 16 28 H 0.17 1.31 7.63 -52.48 -0.40 0.91 16 29 H 0.41 6.13 8.14 -40.82 -0.33 5.79 16 30 H 0.09 1.78 8.06 -52.48 -0.42 1.36 16 31 H 0.11 2.70 6.53 -52.49 -0.34 2.36 16 32 H 0.28 6.24 8.30 -40.82 -0.34 5.90 16 33 H 0.10 2.21 8.06 -52.49 -0.42 1.79 16 34 H 0.10 2.27 6.45 -52.49 -0.34 1.93 16 LS Contribution 331.24 15.07 4.99 4.99 Total: -1.00 -28.40 331.24 -7.84 -36.24 By element: Atomic # 1 Polarization: 9.71 SS G_CDS: -2.24 Total: 7.47 kcal Atomic # 6 Polarization: -7.08 SS G_CDS: -5.48 Total: -12.55 kcal Atomic # 7 Polarization: -38.72 SS G_CDS: 1.31 Total: -37.41 kcal Atomic # 8 Polarization: -9.81 SS G_CDS: 0.07 Total: -9.73 kcal Atomic # 14 Polarization: 17.56 SS G_CDS: -5.04 Total: 12.52 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -1.46 Total: -1.52 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -28.40 -7.84 -36.24 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000753003645.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.353 kcal (2) G-P(sol) polarization free energy of solvation -28.400 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.837 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.237 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.116 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds