Wall clock time and date at job start Tue Mar 31 2020 15:44:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 C 1.53001 * 115.55306 * 2 1 4 4 C 1.50699 * 109.47507 * 65.74219 * 3 2 1 5 5 O 1.21283 * 119.99662 * 5.46796 * 4 3 2 6 6 N 1.34776 * 119.99948 * 185.47462 * 4 3 2 7 7 C 1.39934 * 119.99834 * 175.08781 * 6 4 3 8 8 C 1.39293 * 119.94800 * 146.92065 * 7 6 4 9 9 C 1.38490 * 120.43174 * 179.97438 * 8 7 6 10 10 C 1.37680 * 120.31854 * 0.02562 * 9 8 7 11 11 C 1.40741 * 119.88684 * 0.02963 * 10 9 8 12 12 C 1.41408 * 120.20978 * 179.97438 * 11 10 9 13 13 H 1.08005 * 119.99857 * 148.27654 * 12 11 10 14 14 C 1.39936 * 120.00125 * 328.27120 * 12 11 10 15 15 N 1.30828 * 119.99639 * 349.26166 * 14 12 11 16 16 Si 1.86797 * 120.00036 * 169.26347 * 14 12 11 17 17 H 1.48497 * 109.47023 * 60.00001 * 16 14 12 18 18 H 1.48500 * 109.46857 * 180.02562 * 16 14 12 19 19 H 1.48506 * 109.47215 * 300.00041 * 16 14 12 20 20 C 1.38239 * 119.94894 * 326.94765 * 7 6 4 21 21 C 1.53000 * 117.49960 * 214.32115 * 2 1 3 22 22 C 1.53007 * 117.49804 * 145.66265 * 2 1 3 23 23 Cl 1.80299 * 117.50000 * 215.00302 * 22 2 1 24 24 Cl 1.80298 * 117.49927 * 0.02562 * 22 2 1 25 25 H 1.08998 * 109.47248 * 57.96735 * 1 2 3 26 26 H 1.09001 * 109.47473 * 177.96838 * 1 2 3 27 27 H 1.09001 * 109.47237 * 297.96785 * 1 2 3 28 28 H 1.09006 * 109.46501 * 305.73818 * 3 2 1 29 29 H 1.09001 * 109.46961 * 185.74880 * 3 2 1 30 30 H 0.96999 * 120.00066 * 355.07711 * 6 4 3 31 31 H 1.08005 * 119.78187 * 359.97438 * 8 7 6 32 32 H 1.07995 * 119.83643 * 180.02562 * 9 8 7 33 33 H 1.07998 * 120.05418 * 179.97438 * 10 9 8 34 34 H 0.97003 * 119.99695 * 179.97438 * 15 14 12 35 35 H 1.08001 * 120.16272 * 359.71896 * 20 7 6 36 36 H 1.08996 * 117.49837 * 359.97438 * 21 2 1 37 37 H 1.09008 * 117.49706 * 144.99470 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.1899 1.3804 0.0000 4 6 1.8800 2.0854 1.2953 5 8 1.2832 1.5022 2.1755 6 7 2.2659 3.3641 1.4756 7 6 1.8897 4.0516 2.6349 8 6 2.7419 5.0065 3.1846 9 6 2.3795 5.6932 4.3313 10 6 1.1717 5.4387 4.9413 11 6 0.3008 4.4758 4.3981 12 6 -0.9411 4.2086 5.0193 13 1 -1.7908 3.9119 4.4223 14 6 -1.0691 4.3285 6.4076 15 7 -0.0040 4.4799 7.1520 16 14 -2.7608 4.2723 7.1979 17 1 -3.4085 2.9723 6.8888 18 1 -2.6249 4.4209 8.6692 19 1 -3.5937 5.3797 6.6638 20 6 0.6731 3.7816 3.2333 21 6 2.2364 -1.1208 -0.7652 22 6 2.2364 -1.1207 0.7656 23 17 3.7828 -0.7136 1.5984 24 17 1.2022 -2.3406 1.5980 25 1 -0.3634 0.5451 -0.8712 26 1 -0.3634 -1.0270 -0.0364 27 1 -0.3634 0.4819 0.9076 28 1 1.8050 1.9670 -0.8342 29 1 3.2691 1.2671 -0.1029 30 1 2.8045 3.8077 0.8019 31 1 3.6916 5.2127 2.7133 32 1 3.0475 6.4318 4.7490 33 1 0.8935 5.9764 5.8357 34 1 -0.0928 4.5634 8.1144 35 1 0.0097 3.0444 2.8056 36 1 1.6112 -1.8585 -1.2682 37 1 3.1713 -0.8748 -1.2688 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000837074091.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:44:11 Heat of formation + Delta-G solvation = -5.610442 kcal Electronic energy + Delta-G solvation = -22906.195814 eV Core-core repulsion = 19314.728271 eV Total energy + Delta-G solvation = -3591.467543 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 327.053 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.03932 -38.43511 -36.97893 -35.98788 -35.70021 -34.34364 -32.96834 -30.15427 -29.76890 -28.55195 -27.31270 -25.23361 -22.48538 -21.96011 -20.87922 -19.88268 -19.09980 -17.64170 -16.69616 -16.34702 -15.78178 -15.32527 -15.01491 -14.68212 -14.39539 -13.96382 -13.39241 -13.18745 -13.05766 -12.83386 -12.48391 -12.38939 -12.12251 -11.96179 -11.73218 -11.58034 -11.52817 -11.25076 -11.11886 -11.07476 -10.73680 -10.61455 -10.48562 -10.35774 -10.07074 -9.71110 -9.66728 -9.36355 -9.05765 -8.82442 -7.35471 -6.84646 -6.61512 -4.30251 1.22413 2.16772 2.63933 2.89257 2.97361 3.13162 3.16580 3.23110 3.41046 3.64788 3.97737 4.03028 4.21238 4.52557 4.72773 4.76879 5.16014 5.22138 5.29656 5.35473 5.57532 5.71364 5.73571 5.82624 6.25415 6.28784 6.40147 6.80657 7.03969 7.07123 7.11531 7.30349 7.59156 7.76355 7.99057 8.13021 8.20750 8.30825 8.68384 8.78137 8.99464 9.02393 10.34348 Molecular weight = 327.05amu Principal moments of inertia in cm(-1) A = 0.014038 B = 0.003787 C = 0.003336 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1994.159556 B = 7391.975916 C = 8390.170720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 C -0.065 4.065 3 C -0.113 4.113 4 C 0.504 3.496 5 O -0.496 6.496 6 N -0.671 5.671 7 C 0.151 3.849 8 C -0.257 4.257 9 C -0.095 4.095 10 C -0.164 4.164 11 C 0.122 3.878 12 C -0.463 4.463 13 H 0.075 0.925 14 C 0.075 3.925 15 N -0.804 5.804 16 Si 0.909 3.091 17 H -0.266 1.266 18 H -0.279 1.279 19 H -0.265 1.265 20 C -0.203 4.203 21 C -0.145 4.145 22 C 0.019 3.981 23 Cl -0.092 7.092 24 Cl -0.091 7.091 25 H 0.067 0.933 26 H 0.065 0.935 27 H 0.088 0.912 28 H 0.106 0.894 29 H 0.098 0.902 30 H 0.396 0.604 31 H 0.088 0.912 32 H 0.091 0.909 33 H 0.115 0.885 34 H 0.279 0.721 35 H 0.108 0.892 36 H 0.121 0.879 37 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.687 -7.987 -16.125 18.595 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C -0.067 4.067 3 C -0.154 4.154 4 C 0.289 3.711 5 O -0.369 6.369 6 N -0.315 5.315 7 C 0.059 3.941 8 C -0.279 4.279 9 C -0.114 4.114 10 C -0.184 4.184 11 C 0.119 3.881 12 C -0.493 4.493 13 H 0.093 0.907 14 C -0.141 4.141 15 N -0.430 5.430 16 Si 0.734 3.266 17 H -0.191 1.191 18 H -0.204 1.204 19 H -0.190 1.190 20 C -0.225 4.225 21 C -0.182 4.182 22 C -0.033 4.033 23 Cl -0.065 7.065 24 Cl -0.064 7.064 25 H 0.086 0.914 26 H 0.084 0.916 27 H 0.107 0.893 28 H 0.124 0.876 29 H 0.117 0.883 30 H 0.230 0.770 31 H 0.106 0.894 32 H 0.109 0.891 33 H 0.133 0.867 34 H 0.090 0.910 35 H 0.126 0.874 36 H 0.139 0.861 37 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 4.346 -8.507 -15.112 17.878 hybrid contribution -0.103 0.021 0.354 0.370 sum 4.243 -8.486 -14.757 17.544 Atomic orbital electron populations 1.21522 0.89561 1.03119 1.04064 1.21915 0.96910 0.89743 0.98132 1.21353 1.02318 0.93898 0.97782 1.20260 0.80304 0.81691 0.88807 1.90799 1.38626 1.64678 1.42797 1.43449 1.54050 1.12472 1.21545 1.17430 0.94304 0.94697 0.87638 1.20061 0.99567 1.06565 1.01661 1.20466 0.96813 0.98965 0.95156 1.21300 0.95234 1.00176 1.01678 1.17491 0.92709 0.88163 0.89778 1.19458 0.96689 1.41350 0.91816 0.90681 1.25835 0.98137 0.92530 0.97599 1.69793 1.29935 1.36617 1.06659 0.86354 0.82507 0.79806 0.77913 1.19079 1.20428 1.18971 1.21010 0.95488 1.04090 1.01876 1.24205 1.03660 1.00683 0.89702 1.26745 0.87759 0.98174 0.90600 1.98749 1.32813 1.93498 1.81469 1.98737 1.68203 1.57993 1.81472 0.91362 0.91606 0.89319 0.87594 0.88329 0.77015 0.89366 0.89092 0.86686 0.91042 0.87418 0.86111 0.86333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.44 8.95 37.15 0.33 -1.10 16 2 C -0.07 -0.72 1.59 -154.51 -0.25 -0.97 16 3 C -0.11 -1.24 5.02 -27.88 -0.14 -1.38 16 4 C 0.50 8.35 7.23 -10.99 -0.08 8.27 16 5 O -0.50 -10.47 12.22 5.55 0.07 -10.40 16 6 N -0.67 -11.40 5.34 -9.91 -0.05 -11.46 16 7 C 0.15 3.36 6.28 -83.77 -0.53 2.83 16 8 C -0.26 -5.64 9.97 -39.10 -0.39 -6.03 16 9 C -0.09 -2.23 10.02 -39.69 -0.40 -2.62 16 10 C -0.16 -4.33 8.64 -38.84 -0.34 -4.67 16 11 C 0.12 3.34 5.51 -106.85 -0.59 2.76 16 12 C -0.46 -12.79 9.04 -37.74 -0.34 -13.14 16 13 H 0.08 2.01 7.87 -52.48 -0.41 1.60 16 14 C 0.08 1.97 5.23 -17.34 -0.09 1.88 16 15 N -0.80 -21.73 11.05 55.55 0.61 -21.12 16 16 Si 0.91 19.57 29.57 -169.99 -5.03 14.54 16 17 H -0.27 -5.72 7.11 56.52 0.40 -5.32 16 18 H -0.28 -5.83 7.11 56.52 0.40 -5.43 16 19 H -0.27 -5.57 7.11 56.52 0.40 -5.16 16 20 C -0.20 -5.20 8.39 -38.68 -0.32 -5.52 16 21 C -0.14 -1.20 9.61 -26.69 -0.26 -1.45 16 22 C 0.02 0.23 3.48 -26.69 -0.09 0.14 16 23 Cl -0.09 -1.29 27.67 -51.86 -1.43 -2.72 16 24 Cl -0.09 -1.24 27.72 -51.86 -1.44 -2.68 16 25 H 0.07 0.63 8.14 -51.93 -0.42 0.20 16 26 H 0.06 0.69 7.12 -51.93 -0.37 0.32 16 27 H 0.09 1.33 6.74 -51.93 -0.35 0.98 16 28 H 0.11 0.85 8.14 -51.93 -0.42 0.43 16 29 H 0.10 0.93 7.28 -51.93 -0.38 0.55 16 30 H 0.40 5.08 8.82 -40.82 -0.36 4.72 16 31 H 0.09 1.67 8.06 -52.48 -0.42 1.24 16 32 H 0.09 1.89 8.06 -52.49 -0.42 1.46 16 33 H 0.12 3.13 6.45 -52.49 -0.34 2.79 16 34 H 0.28 6.91 8.30 -40.82 -0.34 6.57 16 35 H 0.11 2.81 6.38 -52.49 -0.33 2.47 16 36 H 0.12 0.81 8.14 -51.93 -0.42 0.39 16 37 H 0.12 0.75 8.14 -51.92 -0.42 0.33 16 LS Contribution 341.48 15.07 5.15 5.15 Total: -1.00 -31.74 341.48 -9.82 -41.55 By element: Atomic # 1 Polarization: 12.35 SS G_CDS: -4.21 Total: 8.13 kcal Atomic # 6 Polarization: -17.53 SS G_CDS: -3.48 Total: -21.00 kcal Atomic # 7 Polarization: -33.13 SS G_CDS: 0.56 Total: -32.57 kcal Atomic # 8 Polarization: -10.47 SS G_CDS: 0.07 Total: -10.40 kcal Atomic # 14 Polarization: 19.57 SS G_CDS: -5.03 Total: 14.54 kcal Atomic # 17 Polarization: -2.52 SS G_CDS: -2.87 Total: -5.40 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -31.74 -9.82 -41.55 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000837074091.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.943 kcal (2) G-P(sol) polarization free energy of solvation -31.738 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.205 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.553 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds