Wall clock time and date at job start Tue Mar 31 2020 14:33:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39052 * 120.56478 * 293.58123 * 3 2 1 5 5 C 1.39436 * 119.80536 * 180.25657 * 4 3 2 6 6 C 1.47892 * 119.51046 * 179.73162 * 5 4 3 7 7 C 1.39739 * 119.99596 * 309.75008 * 6 5 4 8 8 C 1.36563 * 120.14762 * 179.71959 * 7 6 5 9 9 C 1.39821 * 120.15028 * 0.54926 * 8 7 6 10 10 C 1.47605 * 120.00245 * 179.74467 * 9 8 7 11 11 O 1.21491 * 119.99572 * 179.97438 * 10 9 8 12 12 O 1.34740 * 119.99890 * 359.97438 * 10 9 8 13 13 C 1.39781 * 119.99881 * 359.72610 * 9 8 7 14 14 C 1.37794 * 119.84504 * 359.97438 * 13 9 8 15 15 Cl 1.73610 * 120.06991 * 179.97438 * 14 13 9 16 16 C 1.40038 * 120.98663 * 359.75001 * 5 4 3 17 17 C 1.35996 * 121.18562 * 359.95905 * 16 5 4 18 18 C 1.41047 * 120.11175 * 0.04272 * 17 16 5 19 19 C 1.40427 * 120.48464 * 179.97438 * 18 17 16 20 20 H 1.08001 * 120.00415 * 154.64190 * 19 18 17 21 21 C 1.40362 * 119.99709 * 334.64183 * 19 18 17 22 22 N 1.30598 * 119.99946 * 334.61619 * 21 19 18 23 23 Si 1.86802 * 119.99988 * 154.62029 * 21 19 18 24 24 H 1.48501 * 109.47159 * 179.97438 * 23 21 19 25 25 H 1.48503 * 109.46765 * 299.99547 * 23 21 19 26 26 H 1.48500 * 109.47400 * 59.99889 * 23 21 19 27 27 H 1.08004 * 120.09894 * 359.96617 * 4 3 2 28 28 H 1.07992 * 119.92309 * 359.97438 * 7 6 5 29 29 H 1.07998 * 119.92428 * 180.25593 * 8 7 6 30 30 H 0.96699 * 116.99985 * 180.02562 * 12 10 9 31 31 H 1.07997 * 120.07851 * 180.02562 * 13 9 8 32 32 H 1.07998 * 119.40337 * 179.97438 * 16 5 4 33 33 H 1.08000 * 119.93951 * 180.02562 * 17 16 5 34 34 H 0.96991 * 120.00053 * 354.18183 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2754 -0.4780 1.0973 5 6 4.6696 -0.4650 1.0826 6 6 5.4153 -0.9702 2.2556 7 6 5.0952 -0.5131 3.5367 8 6 5.7779 -0.9817 4.6226 9 6 6.8080 -1.9125 4.4565 10 6 7.5475 -2.4126 5.6319 11 8 8.4422 -3.2217 5.4875 12 8 7.2303 -1.9718 6.8650 13 6 7.1372 -2.3697 3.1772 14 6 6.4441 -1.9014 2.0822 15 17 6.8485 -2.4648 0.4906 16 6 5.3744 0.0195 -0.0263 17 6 4.7235 0.4916 -1.1231 18 6 3.3135 0.5009 -1.1597 19 6 2.6333 0.9870 -2.2880 20 1 1.6341 0.6407 -2.5070 21 6 3.2522 1.9231 -3.1311 22 7 4.1882 2.7047 -2.6635 23 14 2.7371 2.0509 -4.9222 24 1 3.5359 3.1080 -5.5927 25 1 2.9705 0.7496 -5.5984 26 1 1.2951 2.3972 -4.9991 27 1 2.7464 -0.8544 1.9605 28 1 4.3034 0.2094 3.6687 29 1 5.5248 -0.6290 5.6115 30 1 7.7428 -2.3277 7.6038 31 1 7.9323 -3.0889 3.0475 32 1 6.4542 0.0181 -0.0102 33 1 5.2872 0.8602 -1.9673 34 1 4.3972 2.6980 -1.7164 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001245371207.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:33:47 Heat of formation + Delta-G solvation = -43.765467 kcal Electronic energy + Delta-G solvation = -23163.988804 eV Core-core repulsion = 19437.466490 eV Total energy + Delta-G solvation = -3726.522314 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 327.045 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -40.49441 -39.12763 -37.79376 -36.23755 -36.18164 -35.34891 -34.68681 -31.94845 -30.94494 -30.18659 -29.20997 -26.25160 -24.09356 -23.06249 -22.08284 -21.72715 -20.60772 -18.60387 -18.28966 -17.81806 -17.19796 -15.75193 -15.48995 -15.28547 -15.06194 -14.82821 -14.68533 -14.14924 -13.78683 -13.51837 -13.21306 -13.02329 -12.94887 -12.62300 -12.29847 -12.06552 -11.78023 -11.75539 -11.57519 -11.49973 -11.33527 -11.11595 -10.98235 -10.83995 -10.65148 -10.50114 -10.13977 -9.95041 -9.51094 -9.07431 -8.75770 -8.13442 -7.89759 -7.62426 -5.01289 0.53589 1.25391 1.98465 2.20529 2.28311 2.57693 2.92753 2.96019 3.00536 3.13341 3.64427 3.66175 3.71114 3.95041 4.23353 4.75955 4.91325 4.93349 5.02958 5.14806 5.26114 5.34552 5.62576 5.69713 5.83999 5.97642 6.11785 6.19109 6.31985 6.33107 6.48324 6.55022 6.68692 6.84795 7.09912 7.20528 7.27430 7.40400 7.56821 7.71115 7.73861 8.11668 8.22672 8.61599 9.43917 Molecular weight = 327.04amu Principal moments of inertia in cm(-1) A = 0.019522 B = 0.003156 C = 0.002905 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1433.948219 B = 8869.471837 C = 9635.034038 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.501 5.501 2 C 0.297 3.703 3 C -0.189 4.189 4 C 0.021 3.979 5 C -0.236 4.236 6 C 0.068 3.932 7 C -0.135 4.135 8 C -0.050 4.050 9 C -0.155 4.155 10 C 0.533 3.467 11 O -0.521 6.521 12 O -0.513 6.513 13 C -0.038 4.038 14 C -0.064 4.064 15 Cl -0.053 7.053 16 C -0.019 4.019 17 C -0.217 4.217 18 C 0.131 3.869 19 C -0.455 4.455 20 H 0.089 0.911 21 C 0.035 3.965 22 N -0.748 5.748 23 Si 1.066 2.934 24 H -0.267 1.267 25 H -0.267 1.267 26 H -0.270 1.270 27 H 0.104 0.896 28 H 0.139 0.861 29 H 0.138 0.862 30 H 0.412 0.588 31 H 0.142 0.858 32 H 0.100 0.900 33 H 0.115 0.885 34 H 0.309 0.691 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.202 -3.874 9.136 12.261 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.180 5.180 2 C -0.013 4.013 3 C -0.195 4.195 4 C 0.000 4.000 5 C -0.238 4.238 6 C 0.067 3.933 7 C -0.153 4.153 8 C -0.068 4.068 9 C -0.157 4.157 10 C 0.378 3.622 11 O -0.411 6.411 12 O -0.325 6.325 13 C -0.056 4.056 14 C -0.091 4.091 15 Cl -0.024 7.024 16 C -0.039 4.039 17 C -0.236 4.236 18 C 0.125 3.875 19 C -0.480 4.480 20 H 0.107 0.893 21 C -0.192 4.192 22 N -0.368 5.368 23 Si 0.887 3.113 24 H -0.191 1.191 25 H -0.192 1.192 26 H -0.195 1.195 27 H 0.122 0.878 28 H 0.157 0.843 29 H 0.155 0.845 30 H 0.270 0.730 31 H 0.160 0.840 32 H 0.118 0.882 33 H 0.133 0.867 34 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 5.880 -3.150 7.234 9.840 hybrid contribution 0.594 -1.132 1.909 2.297 sum 6.474 -4.283 9.143 11.993 Atomic orbital electron populations 1.81052 1.12610 1.14090 1.10273 1.25695 0.92623 0.91331 0.91664 1.16633 0.83300 1.21774 0.97748 1.20544 0.92219 0.92373 0.94875 1.17541 0.91858 1.18594 0.95763 1.19125 0.90498 0.89668 0.93988 1.21079 1.01766 1.01597 0.90838 1.21131 0.92597 0.93290 0.99804 1.18711 1.01766 1.04931 0.90277 1.20815 0.80577 0.77861 0.82914 1.90882 1.30789 1.32855 1.86590 1.84570 1.62831 1.67864 1.17197 1.20956 0.97738 0.97476 0.89476 1.20898 1.00535 1.00798 0.86822 1.98373 1.92830 1.88056 1.23131 1.20396 0.97973 0.93674 0.91811 1.20742 0.93456 1.10259 0.99155 1.18499 0.91442 0.88283 0.89276 1.21004 1.03378 1.18596 1.05022 0.89340 1.27462 0.92187 0.91699 1.07901 1.70390 1.19744 1.26296 1.20372 0.83599 0.77596 0.78488 0.71643 1.19102 1.19188 1.19456 0.87804 0.84330 0.84451 0.72971 0.84048 0.88172 0.86674 0.87663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -11.51 18.54 41.84 0.78 -10.74 16 2 C 0.30 6.56 14.30 -22.47 -0.32 6.24 16 3 C -0.19 -4.00 5.93 -104.27 -0.62 -4.62 16 4 C 0.02 0.39 9.17 -38.83 -0.36 0.03 16 5 C -0.24 -4.19 5.12 -104.82 -0.54 -4.73 16 6 C 0.07 1.05 5.45 -104.78 -0.57 0.48 16 7 C -0.13 -1.77 9.41 -39.63 -0.37 -2.14 16 8 C -0.05 -0.58 9.55 -39.59 -0.38 -0.96 16 9 C -0.16 -1.98 5.88 -104.91 -0.62 -2.60 16 10 C 0.53 6.43 8.27 34.55 0.29 6.71 16 11 O -0.52 -7.60 17.12 -19.26 -0.33 -7.93 16 12 O -0.51 -4.43 12.66 -40.60 -0.51 -4.94 16 13 C -0.04 -0.51 9.37 -39.17 -0.37 -0.88 16 14 C -0.06 -0.95 6.26 -39.14 -0.24 -1.20 16 15 Cl -0.05 -0.80 25.91 -51.86 -1.34 -2.15 16 16 C -0.02 -0.36 8.00 -39.71 -0.32 -0.68 16 17 C -0.22 -4.51 7.88 -39.32 -0.31 -4.82 16 18 C 0.13 2.91 5.46 -104.61 -0.57 2.33 16 19 C -0.45 -10.35 8.49 -37.96 -0.32 -10.67 16 20 H 0.09 2.06 7.45 -52.49 -0.39 1.67 16 21 C 0.04 0.76 4.95 -17.28 -0.09 0.67 16 22 N -0.75 -16.60 12.30 55.57 0.68 -15.91 16 23 Si 1.07 18.54 30.01 -169.99 -5.10 13.44 16 24 H -0.27 -4.59 7.11 56.52 0.40 -4.19 16 25 H -0.27 -4.49 7.11 56.52 0.40 -4.09 16 26 H -0.27 -4.59 7.11 56.52 0.40 -4.19 16 27 H 0.10 1.71 8.02 -52.48 -0.42 1.29 16 28 H 0.14 1.65 8.02 -52.49 -0.42 1.23 16 29 H 0.14 1.30 7.59 -52.49 -0.40 0.90 16 30 H 0.41 1.64 9.11 45.56 0.42 2.06 16 31 H 0.14 1.85 7.64 -52.49 -0.40 1.45 16 32 H 0.10 1.75 7.07 -52.49 -0.37 1.38 16 33 H 0.12 2.45 6.48 -52.49 -0.34 2.11 16 34 H 0.31 6.92 6.68 -40.82 -0.27 6.65 16 LS Contribution 329.41 15.07 4.96 4.96 Total: -1.00 -25.87 329.41 -7.97 -33.83 By element: Atomic # 1 Polarization: 7.65 SS G_CDS: -1.40 Total: 6.26 kcal Atomic # 6 Polarization: -11.11 SS G_CDS: -5.71 Total: -16.82 kcal Atomic # 7 Polarization: -28.11 SS G_CDS: 1.46 Total: -26.65 kcal Atomic # 8 Polarization: -12.03 SS G_CDS: -0.84 Total: -12.88 kcal Atomic # 14 Polarization: 18.54 SS G_CDS: -5.10 Total: 13.44 kcal Atomic # 17 Polarization: -0.80 SS G_CDS: -1.34 Total: -2.15 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -25.87 -7.97 -33.83 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001245371207.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.930 kcal (2) G-P(sol) polarization free energy of solvation -25.869 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.799 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.966 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.835 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds