Wall clock time and date at job start Tue Mar 31 2020 15:25:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 C 1.39933 * 120.45657 * 279.83518 * 3 2 1 5 5 N 1.31310 * 120.74015 * 179.76461 * 4 3 2 6 6 C 1.32825 * 121.81544 * 0.52798 * 5 4 3 7 7 C 1.48083 * 119.57692 * 179.74831 * 6 5 4 8 8 O 1.21534 * 119.99676 * 179.72266 * 7 6 5 9 9 N 1.34771 * 120.00258 * 359.72831 * 7 6 5 10 10 C 1.39830 * 120.00194 * 184.03562 * 9 7 6 11 11 C 1.39322 * 119.95143 * 144.52651 * 10 9 7 12 12 C 1.38476 * 120.42251 * 179.72317 * 11 10 9 13 13 C 1.37687 * 120.32967 * 0.55264 * 12 11 10 14 14 C 1.40751 * 119.88835 * 359.72034 * 13 12 11 15 15 C 1.41412 * 120.20699 * 180.02562 * 14 13 12 16 16 H 1.08003 * 119.99661 * 214.73449 * 15 14 13 17 17 C 1.39931 * 119.99837 * 34.73798 * 15 14 13 18 18 N 1.30827 * 120.00130 * 355.55305 * 17 15 14 19 19 Si 1.86798 * 119.99742 * 175.55574 * 17 15 14 20 20 H 1.48499 * 109.47210 * 89.99924 * 19 17 15 21 21 H 1.48499 * 109.47154 * 210.00105 * 19 17 15 22 22 H 1.48502 * 109.47278 * 330.00031 * 19 17 15 23 23 C 1.38276 * 119.95133 * 324.79870 * 10 9 7 24 24 C 1.39498 * 120.83994 * 359.47023 * 6 5 4 25 25 Cl 1.73598 * 120.41115 * 180.27913 * 24 6 5 26 26 C 1.38557 * 119.17239 * 0.25836 * 24 6 5 27 27 H 1.08003 * 119.62644 * 0.02562 * 4 3 2 28 28 H 0.96998 * 120.00089 * 4.31186 * 9 7 6 29 29 H 1.07993 * 119.78454 * 359.97438 * 11 10 9 30 30 H 1.07999 * 119.83903 * 180.27792 * 12 11 10 31 31 H 1.08002 * 120.05819 * 179.74754 * 13 12 11 32 32 H 0.96999 * 120.00120 * 179.97438 * 18 17 15 33 33 H 1.07996 * 120.16042 * 359.97438 * 23 10 9 34 34 H 1.07993 * 120.82815 * 179.97438 * 26 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2775 -0.2051 1.1885 5 7 4.5905 -0.2102 1.1941 6 6 5.2963 -0.0122 0.0864 7 6 6.7757 -0.0226 0.1507 8 8 7.4290 0.1527 -0.8590 9 7 7.3976 -0.2267 1.3288 10 6 8.7919 -0.1528 1.4053 11 6 9.3993 0.3667 2.5465 12 6 10.7793 0.4391 2.6351 13 6 11.5666 0.0086 1.5908 14 6 10.9671 -0.5134 0.4292 15 6 11.7692 -0.9581 -0.6471 16 1 11.4287 -0.8284 -1.6639 17 6 13.0040 -1.5661 -0.3949 18 7 13.4562 -1.6451 0.8302 19 14 14.0068 -2.2649 -1.8075 20 1 14.9127 -1.2149 -2.3384 21 1 14.8120 -3.4142 -1.3219 22 1 13.0927 -2.7213 -2.8853 23 6 9.5656 -0.5903 0.3461 24 6 4.6616 0.1997 -1.1376 25 17 5.5950 0.4502 -2.5797 26 6 3.2770 0.2074 -1.1880 27 1 2.7389 -0.3656 2.1108 28 1 6.8784 -0.4287 2.1228 29 1 8.7900 0.7114 3.3688 30 1 11.2404 0.8394 3.5259 31 1 12.6424 0.0709 1.6629 32 1 14.3119 -2.0669 1.0051 33 1 9.0957 -0.9895 -0.5406 34 1 2.7581 0.3694 -2.1211 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001433484191.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:25:13 Heat of formation + Delta-G solvation = 63.192655 kcal Electronic energy + Delta-G solvation = -23127.443718 eV Core-core repulsion = 19437.852207 eV Total energy + Delta-G solvation = -3689.591511 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 327.052 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.17588 -39.44131 -37.37461 -36.99009 -36.79427 -34.54348 -33.46640 -32.85072 -31.91788 -29.80393 -28.40366 -25.91617 -25.26912 -24.31843 -22.12269 -20.92212 -20.06687 -19.78937 -18.24279 -17.77209 -17.17840 -15.72788 -15.64361 -15.47147 -15.26906 -14.93844 -14.60927 -14.44073 -14.03087 -13.86612 -13.58740 -13.55666 -13.04721 -12.95221 -12.82007 -12.30456 -12.14867 -11.67171 -11.57317 -11.16608 -11.12740 -10.93545 -10.59421 -10.41320 -10.36525 -10.09592 -9.66011 -9.48006 -9.39207 -9.13702 -8.88545 -7.38855 -6.93451 -6.56256 -4.36366 -0.37870 0.39771 1.63258 2.02585 2.11294 2.67314 2.84249 2.96977 3.10173 3.12752 3.15102 3.22829 3.24946 3.57447 3.72213 3.98341 4.01702 4.23396 4.52396 4.60093 4.73182 5.09291 5.19386 5.60298 5.67112 6.23146 6.35867 6.66433 6.79443 6.92232 7.01760 7.05132 7.10710 7.32838 7.51762 7.70662 7.94337 8.10052 8.11756 8.24412 8.54095 8.70870 8.97631 8.99123 10.33418 Molecular weight = 327.05amu Principal moments of inertia in cm(-1) A = 0.020044 B = 0.002938 C = 0.002646 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1396.571872 B = 9527.847248 C =10579.056994 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.394 5.394 2 C 0.257 3.743 3 C -0.053 4.053 4 C 0.154 3.846 5 N -0.441 5.441 6 C 0.130 3.870 7 C 0.547 3.453 8 O -0.481 6.481 9 N -0.639 5.639 10 C 0.136 3.864 11 C -0.243 4.243 12 C -0.100 4.100 13 C -0.157 4.157 14 C 0.112 3.888 15 C -0.460 4.460 16 H 0.076 0.924 17 C 0.070 3.930 18 N -0.813 5.813 19 Si 0.914 3.086 20 H -0.270 1.270 21 H -0.278 1.278 22 H -0.263 1.263 23 C -0.196 4.196 24 C -0.046 4.046 25 Cl 0.007 6.993 26 C -0.026 4.026 27 H 0.181 0.819 28 H 0.409 0.591 29 H 0.091 0.909 30 H 0.093 0.907 31 H 0.130 0.870 32 H 0.277 0.723 33 H 0.114 0.886 34 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.851 2.234 -0.462 17.005 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.069 5.069 2 C -0.060 4.060 3 C -0.059 4.059 4 C -0.009 4.009 5 N -0.151 5.151 6 C -0.010 4.010 7 C 0.330 3.670 8 O -0.353 6.353 9 N -0.283 5.283 10 C 0.045 3.955 11 C -0.265 4.265 12 C -0.119 4.119 13 C -0.177 4.177 14 C 0.109 3.891 15 C -0.491 4.491 16 H 0.095 0.905 17 C -0.144 4.144 18 N -0.441 5.441 19 Si 0.739 3.261 20 H -0.195 1.195 21 H -0.204 1.204 22 H -0.187 1.187 23 C -0.217 4.217 24 C -0.077 4.077 25 Cl 0.037 6.963 26 C -0.054 4.054 27 H 0.198 0.802 28 H 0.244 0.756 29 H 0.110 0.890 30 H 0.111 0.889 31 H 0.147 0.853 32 H 0.088 0.912 33 H 0.132 0.868 34 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -17.358 2.163 -0.450 17.499 hybrid contribution 0.113 -0.357 -0.916 0.990 sum -17.246 1.806 -1.366 17.394 Atomic orbital electron populations 1.81324 1.11566 1.07638 1.06350 1.25136 0.91931 0.94354 0.94598 1.17016 0.85979 1.07273 0.95679 1.23102 0.89129 0.91713 0.96931 1.67879 1.07868 1.11443 1.27921 1.21625 0.96021 0.95389 0.87968 1.17664 0.84729 0.79667 0.84900 1.90961 1.64351 1.46535 1.33456 1.43182 1.06875 1.67545 1.10709 1.17450 0.79371 1.01588 0.97131 1.20149 0.94800 1.13060 0.98448 1.20554 0.92716 1.00620 0.98026 1.21675 1.00386 1.01100 0.94500 1.17563 0.90282 0.88131 0.93114 1.19515 1.00977 1.34287 0.94279 0.90544 1.25851 0.97150 0.94912 0.96528 1.69753 1.18670 1.35465 1.20181 0.86217 0.79591 0.78855 0.81439 1.19544 1.20366 1.18719 1.21273 0.93765 1.07725 0.98915 1.21838 0.92428 1.02191 0.91212 1.98484 1.71575 1.93810 1.32469 1.21612 0.91556 0.93560 0.98694 0.80233 0.75551 0.89033 0.88860 0.85260 0.91227 0.86802 0.82014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -3.90 18.54 41.84 0.78 -3.12 16 2 C 0.26 1.94 15.36 -22.47 -0.35 1.59 16 3 C -0.05 -0.36 5.75 -106.72 -0.61 -0.97 16 4 C 0.15 1.06 10.91 -17.14 -0.19 0.87 16 5 N -0.44 -4.46 9.52 -9.45 -0.09 -4.55 16 6 C 0.13 1.62 6.75 -82.93 -0.56 1.06 16 7 C 0.55 9.19 7.64 -12.22 -0.09 9.10 16 8 O -0.48 -9.56 11.36 5.34 0.06 -9.50 16 9 N -0.64 -11.03 5.32 -10.70 -0.06 -11.09 16 10 C 0.14 2.94 6.29 -83.79 -0.53 2.41 16 11 C -0.24 -5.14 9.97 -39.09 -0.39 -5.53 16 12 C -0.10 -2.26 10.01 -39.69 -0.40 -2.66 16 13 C -0.16 -4.02 8.67 -38.83 -0.34 -4.35 16 14 C 0.11 2.99 5.55 -106.85 -0.59 2.40 16 15 C -0.46 -12.39 9.04 -37.74 -0.34 -12.73 16 16 H 0.08 2.03 7.85 -52.48 -0.41 1.61 16 17 C 0.07 1.79 5.42 -17.35 -0.09 1.69 16 18 N -0.81 -21.08 10.60 55.55 0.59 -20.49 16 19 Si 0.91 19.19 29.56 -169.99 -5.03 14.16 16 20 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 21 H -0.28 -5.71 7.11 56.52 0.40 -5.31 16 22 H -0.26 -5.52 7.11 56.52 0.40 -5.11 16 23 C -0.20 -4.85 8.43 -38.68 -0.33 -5.17 16 24 C -0.05 -0.50 6.36 -38.99 -0.25 -0.74 16 25 Cl 0.01 0.09 26.00 -51.86 -1.35 -1.26 16 26 C -0.03 -0.19 9.70 -38.85 -0.38 -0.56 16 27 H 0.18 0.65 8.06 -52.48 -0.42 0.23 16 28 H 0.41 5.84 8.15 -40.82 -0.33 5.50 16 29 H 0.09 1.66 8.06 -52.49 -0.42 1.24 16 30 H 0.09 1.86 8.06 -52.49 -0.42 1.43 16 31 H 0.13 3.44 6.13 -52.49 -0.32 3.12 16 32 H 0.28 6.57 8.30 -40.82 -0.34 6.24 16 33 H 0.11 2.88 6.24 -52.49 -0.33 2.55 16 34 H 0.16 0.78 8.06 -52.49 -0.42 0.36 16 LS Contribution 326.96 15.07 4.93 4.93 Total: -1.00 -30.01 326.96 -7.82 -37.83 By element: Atomic # 1 Polarization: 8.91 SS G_CDS: -2.22 Total: 6.69 kcal Atomic # 6 Polarization: -8.17 SS G_CDS: -5.43 Total: -13.60 kcal Atomic # 7 Polarization: -40.46 SS G_CDS: 1.22 Total: -39.25 kcal Atomic # 8 Polarization: -9.56 SS G_CDS: 0.06 Total: -9.50 kcal Atomic # 14 Polarization: 19.19 SS G_CDS: -5.03 Total: 14.16 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.35 Total: -1.26 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -30.01 -7.82 -37.83 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001433484191.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.023 kcal (2) G-P(sol) polarization free energy of solvation -30.015 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.009 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.816 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.831 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds