Wall clock time and date at job start Tue Mar 31 2020 14:26:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38159 * 119.98024 * 2 1 4 4 C 1.38701 * 119.95761 * 180.02562 * 3 2 1 5 5 O 1.35924 * 120.04343 * 180.02562 * 4 3 2 6 6 C 1.42896 * 117.00075 * 180.02562 * 5 4 3 7 7 C 1.50707 * 109.46884 * 180.02562 * 6 5 4 8 8 O 1.20818 * 120.00374 * 359.97438 * 7 6 5 9 9 O 1.34234 * 119.99942 * 179.97438 * 7 6 5 10 10 C 1.45190 * 117.00202 * 179.97438 * 9 7 6 11 11 C 1.50695 * 109.47352 * 179.97438 * 10 9 7 12 12 O 1.21295 * 120.00102 * 0.02562 * 11 10 9 13 13 N 1.34778 * 120.00343 * 179.97438 * 11 10 9 14 14 C 1.37093 * 120.00389 * 180.02562 * 13 11 10 15 15 H 1.08003 * 120.00082 * 359.97438 * 14 13 11 16 16 C 1.38951 * 120.00114 * 180.02562 * 14 13 11 17 17 N 1.31406 * 120.00081 * 359.97438 * 16 14 13 18 18 Si 1.86801 * 119.99686 * 179.97438 * 16 14 13 19 19 H 1.48498 * 109.47337 * 359.97438 * 18 16 14 20 20 H 1.48501 * 109.47153 * 120.00050 * 18 16 14 21 21 H 1.48502 * 109.46932 * 239.99518 * 18 16 14 22 22 C 1.38738 * 119.91880 * 359.97438 * 4 3 2 23 23 C 1.38126 * 119.95522 * 359.97438 * 22 4 3 24 24 C 1.38345 * 119.97676 * 179.97438 * 2 1 3 25 25 Cl 1.73605 * 119.95979 * 359.72660 * 24 2 1 26 26 H 1.08998 * 109.47135 * 270.02403 * 1 2 3 27 27 H 1.08999 * 109.46850 * 30.02744 * 1 2 3 28 28 H 1.08997 * 109.47106 * 150.02405 * 1 2 3 29 29 H 1.08001 * 120.02301 * 359.97434 * 3 2 1 30 30 H 1.08997 * 109.47009 * 299.99128 * 6 5 4 31 31 H 1.08993 * 109.47480 * 59.99649 * 6 5 4 32 32 H 1.09008 * 109.47088 * 299.99557 * 10 9 7 33 33 H 1.09001 * 109.47320 * 59.99476 * 10 9 7 34 34 H 0.97002 * 119.99938 * 0.02562 * 13 11 10 35 35 H 0.97005 * 120.00017 * 180.02562 * 17 16 14 36 36 H 1.07998 * 120.02532 * 179.97438 * 22 4 3 37 37 H 1.07994 * 119.98203 * 180.02562 * 23 22 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1974 1.1967 0.0000 4 6 3.5844 1.1962 -0.0005 5 8 4.2654 2.3725 0.0000 6 6 5.6923 2.2961 -0.0012 7 6 6.2698 3.6881 0.0002 8 8 5.5350 4.6471 0.0016 9 8 7.6008 3.8625 0.0000 10 6 8.0863 5.2308 0.0009 11 6 9.5933 5.2292 0.0011 12 8 10.1986 4.1781 0.0001 13 7 10.2685 6.3956 0.0013 14 6 11.6395 6.3941 0.0010 15 1 12.1785 5.4582 0.0009 16 6 12.3356 7.5967 0.0018 17 7 11.6798 8.7354 0.0023 18 14 14.2036 7.5945 0.0020 19 1 14.6970 6.1939 0.0019 20 1 14.6996 8.2947 -1.2100 21 1 14.6992 8.2934 1.2150 22 6 4.2759 -0.0066 -0.0005 23 6 3.5822 -1.2010 0.0005 24 6 2.1982 -1.1984 0.0005 25 17 1.3286 -2.7009 0.0084 26 1 -0.3633 0.0004 1.0276 27 1 -0.3633 0.8897 -0.5143 28 1 -0.3633 -0.8902 -0.5134 29 1 1.6574 2.1321 -0.0004 30 1 6.0283 1.7629 0.8881 31 1 6.0270 1.7644 -0.8918 32 1 7.7234 5.7457 -0.8887 33 1 7.7238 5.7445 0.8913 34 1 9.7845 7.2362 0.0017 35 1 12.1658 9.5750 0.0025 36 1 5.3559 -0.0090 -0.0014 37 1 4.1200 -2.1375 0.0010 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000731234708.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:26:18 Heat of formation + Delta-G solvation = -139.490466 kcal Electronic energy + Delta-G solvation = -23494.650881 eV Core-core repulsion = 19456.668700 eV Total energy + Delta-G solvation = -4037.982181 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 327.075 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.95618 -40.19417 -38.47236 -38.02385 -36.59841 -36.15241 -34.06021 -33.10027 -31.45995 -31.09814 -29.38469 -27.86497 -27.29871 -24.65238 -23.15844 -22.28898 -20.85373 -19.66237 -18.61093 -18.12236 -17.54003 -17.10835 -17.07725 -16.65336 -16.06312 -15.83089 -15.43684 -14.83018 -14.59374 -14.51645 -14.09095 -13.97818 -13.82219 -13.55964 -12.93816 -12.85664 -12.66756 -12.53431 -12.44627 -12.10183 -12.08341 -11.67084 -11.65925 -11.18930 -11.07518 -11.04919 -10.55146 -10.52274 -10.42525 -10.33705 -9.66550 -9.33719 -8.59603 -8.54786 -8.13519 -6.54540 -3.96809 0.74260 0.81056 1.77332 1.90123 2.08092 3.08547 3.14231 3.18817 3.22658 3.29844 3.67335 4.04799 4.23352 4.27986 4.42422 4.54114 4.66865 4.70468 4.80958 4.90405 4.96272 5.10168 5.15108 5.20405 5.42468 5.43270 5.49530 5.60985 5.69204 5.79689 5.89155 5.97370 6.10327 6.43218 6.82378 7.43732 7.66571 7.89485 8.42691 9.02262 9.33758 9.83029 10.62561 Molecular weight = 327.08amu Principal moments of inertia in cm(-1) A = 0.042881 B = 0.001691 C = 0.001629 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 652.813316 B =16554.148989 C =17181.208793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.036 4.036 3 C -0.138 4.138 4 C 0.144 3.856 5 O -0.290 6.290 6 C 0.069 3.931 7 C 0.461 3.539 8 O -0.490 6.490 9 O -0.321 6.321 10 C 0.063 3.937 11 C 0.437 3.563 12 O -0.577 6.577 13 N -0.551 5.551 14 C -0.303 4.303 15 H 0.107 0.893 16 C 0.025 3.975 17 N -0.896 5.896 18 Si 0.934 3.066 19 H -0.267 1.267 20 H -0.280 1.280 21 H -0.280 1.280 22 C -0.204 4.204 23 C -0.063 4.063 24 C -0.076 4.076 25 Cl -0.071 7.071 26 H 0.079 0.921 27 H 0.074 0.926 28 H 0.076 0.924 29 H 0.143 0.857 30 H 0.111 0.889 31 H 0.111 0.889 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.395 0.605 35 H 0.274 0.726 36 H 0.142 0.858 37 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.076 -16.951 0.012 27.046 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.037 4.037 3 C -0.157 4.157 4 C 0.098 3.902 5 O -0.203 6.203 6 C -0.007 4.007 7 C 0.302 3.698 8 O -0.377 6.377 9 O -0.236 6.236 10 C -0.014 4.014 11 C 0.222 3.778 12 O -0.461 6.461 13 N -0.188 5.188 14 C -0.432 4.432 15 H 0.125 0.875 16 C -0.177 4.177 17 N -0.536 5.536 18 Si 0.761 3.239 19 H -0.191 1.191 20 H -0.206 1.206 21 H -0.206 1.206 22 C -0.223 4.223 23 C -0.081 4.081 24 C -0.103 4.103 25 Cl -0.042 7.042 26 H 0.098 0.902 27 H 0.093 0.907 28 H 0.095 0.905 29 H 0.161 0.839 30 H 0.129 0.871 31 H 0.129 0.871 32 H 0.108 0.892 33 H 0.108 0.892 34 H 0.229 0.771 35 H 0.084 0.916 36 H 0.160 0.840 37 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -20.928 -17.066 0.012 27.005 hybrid contribution 0.741 0.556 0.010 0.926 sum -20.187 -16.511 0.022 26.079 Atomic orbital electron populations 1.20908 0.89691 1.03814 1.03299 1.19536 0.96793 0.90414 0.96920 1.20247 0.90685 0.98464 1.06307 1.19015 0.91746 0.84252 0.95198 1.86098 1.17975 1.27851 1.88362 1.21921 0.79642 0.93234 1.05952 1.22791 0.81823 0.91213 0.74002 1.90710 1.60671 1.42316 1.43990 1.86483 1.21663 1.32366 1.83082 1.22829 0.95468 0.79305 1.03845 1.19262 0.86797 0.85522 0.86236 1.90566 1.69144 1.30965 1.55407 1.41706 1.07339 1.06143 1.63593 1.19784 0.80486 0.94729 1.48235 0.87498 1.25328 1.01080 0.94545 0.96791 1.69619 1.36803 0.97691 1.49477 0.85730 0.81638 0.78728 0.77837 1.19070 1.20587 1.20593 1.21287 1.00976 0.91357 1.08690 1.20834 0.91799 0.98654 0.96860 1.20675 0.92315 0.86780 1.10542 1.98353 1.76737 1.31963 1.97137 0.90231 0.90675 0.90515 0.83936 0.87135 0.87125 0.89231 0.89239 0.77109 0.91612 0.84026 0.84398 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.72 9.61 36.01 0.35 -0.38 16 2 C -0.04 -0.29 5.88 -104.61 -0.62 -0.91 16 3 C -0.14 -1.25 9.64 -39.44 -0.38 -1.63 16 4 C 0.14 1.42 6.69 -39.23 -0.26 1.16 16 5 O -0.29 -3.40 9.67 -39.45 -0.38 -3.78 16 6 C 0.07 0.71 5.33 36.01 0.19 0.91 16 7 C 0.46 6.85 8.03 36.01 0.29 7.13 16 8 O -0.49 -8.56 16.25 -25.47 -0.41 -8.98 16 9 O -0.32 -5.57 9.75 -45.91 -0.45 -6.02 16 10 C 0.06 1.15 5.94 36.00 0.21 1.36 16 11 C 0.44 10.23 7.86 -10.99 -0.09 10.14 16 12 O -0.58 -15.58 16.08 -14.12 -0.23 -15.80 16 13 N -0.55 -13.61 5.29 -10.96 -0.06 -13.67 16 14 C -0.30 -8.22 9.68 -14.93 -0.14 -8.36 16 15 H 0.11 3.03 7.16 -52.48 -0.38 2.65 16 16 C 0.03 0.66 5.50 -17.47 -0.10 0.56 16 17 N -0.90 -23.66 13.05 55.50 0.72 -22.94 16 18 Si 0.93 20.37 29.55 -169.99 -5.02 15.34 16 19 H -0.27 -5.80 7.11 56.52 0.40 -5.40 16 20 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 21 H -0.28 -6.02 7.11 56.52 0.40 -5.61 16 22 C -0.20 -1.68 9.04 -39.44 -0.36 -2.04 16 23 C -0.06 -0.49 9.82 -39.57 -0.39 -0.88 16 24 C -0.08 -0.64 6.31 -39.48 -0.25 -0.89 16 25 Cl -0.07 -0.55 27.29 -51.86 -1.42 -1.96 16 26 H 0.08 0.42 8.14 -51.93 -0.42 -0.01 16 27 H 0.07 0.37 8.08 -51.93 -0.42 -0.05 16 28 H 0.08 0.44 6.90 -51.93 -0.36 0.08 16 29 H 0.14 1.16 8.06 -52.49 -0.42 0.74 16 30 H 0.11 0.88 7.66 -51.93 -0.40 0.49 16 31 H 0.11 0.88 7.66 -51.93 -0.40 0.49 16 32 H 0.09 1.48 8.14 -51.92 -0.42 1.06 16 33 H 0.09 1.48 8.13 -51.93 -0.42 1.06 16 34 H 0.40 9.25 7.90 -40.82 -0.32 8.93 16 35 H 0.27 6.81 8.31 -40.82 -0.34 6.47 16 36 H 0.14 0.89 6.30 -52.49 -0.33 0.56 16 37 H 0.14 0.83 8.06 -52.49 -0.42 0.41 16 LS Contribution 348.09 15.07 5.25 5.25 Total: -1.00 -32.74 348.09 -7.39 -40.13 By element: Atomic # 1 Polarization: 10.10 SS G_CDS: -3.85 Total: 6.25 kcal Atomic # 6 Polarization: 7.71 SS G_CDS: -1.54 Total: 6.17 kcal Atomic # 7 Polarization: -37.27 SS G_CDS: 0.67 Total: -36.60 kcal Atomic # 8 Polarization: -33.11 SS G_CDS: -1.47 Total: -34.58 kcal Atomic # 14 Polarization: 20.37 SS G_CDS: -5.02 Total: 15.34 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.42 Total: -1.96 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -32.74 -7.39 -40.13 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000731234708.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.361 kcal (2) G-P(sol) polarization free energy of solvation -32.744 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.129 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds