Wall clock time and date at job start Tue Mar 31 2020 15:18:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46505 * 109.46751 * 2 1 4 4 N 1.39926 * 125.75011 * 269.97381 * 3 2 1 5 5 C 1.30414 * 108.95716 * 179.75994 * 4 3 2 6 6 C 1.50694 * 125.97590 * 180.24521 * 5 4 3 7 7 C 1.41342 * 108.04890 * 0.40644 * 5 4 3 8 8 C 1.47297 * 126.43435 * 179.85188 * 7 5 4 9 9 O 1.21611 * 120.00465 * 269.71301 * 8 7 5 10 10 N 1.34783 * 119.99433 * 89.71920 * 8 7 5 11 11 C 1.47422 * 125.65155 * 359.96703 * 10 8 7 12 12 C 1.54907 * 104.83115 * 155.91433 * 11 10 8 13 13 C 1.55162 * 101.58039 * 37.01385 * 12 11 10 14 14 O 1.42905 * 110.71869 * 82.86050 * 13 12 11 15 15 C 1.50701 * 110.72075 * 205.95482 * 13 12 11 16 16 H 1.08000 * 119.99666 * 357.56011 * 15 13 12 17 17 C 1.37875 * 120.00020 * 177.56128 * 15 13 12 18 18 N 1.31514 * 120.00056 * 359.97438 * 17 15 13 19 19 Si 1.86799 * 120.00248 * 179.97438 * 17 15 13 20 20 H 1.48506 * 109.47056 * 0.02562 * 19 17 15 21 21 H 1.48498 * 109.47253 * 119.99841 * 19 17 15 22 22 H 1.48495 * 109.47433 * 239.99969 * 19 17 15 23 23 C 1.47488 * 125.59011 * 180.02562 * 10 8 7 24 24 C 1.34347 * 125.74652 * 90.00030 * 3 2 1 25 25 Cl 1.73601 * 126.32103 * 359.97438 * 24 3 2 26 26 H 1.08996 * 109.47869 * 299.99978 * 1 2 3 27 27 H 1.08998 * 109.47163 * 60.00551 * 1 2 3 28 28 H 1.09004 * 109.46567 * 179.97438 * 1 2 3 29 29 H 1.08999 * 109.47378 * 239.99917 * 2 1 3 30 30 H 1.08998 * 109.47163 * 119.99449 * 2 1 3 31 31 H 1.09001 * 109.47047 * 270.19484 * 6 5 4 32 32 H 1.09004 * 109.47230 * 30.19201 * 6 5 4 33 33 H 1.08996 * 109.47419 * 150.19355 * 6 5 4 34 34 H 1.09000 * 110.36343 * 37.08413 * 11 10 8 35 35 H 1.08992 * 110.46306 * 274.80415 * 11 10 8 36 36 H 1.09001 * 111.00887 * 278.94185 * 12 11 10 37 37 H 1.09000 * 111.00350 * 155.08660 * 12 11 10 38 38 H 0.96696 * 114.00036 * 182.44115 * 14 13 12 39 39 H 0.97001 * 120.00180 * 180.02562 * 18 17 15 40 40 H 1.09001 * 110.03275 * 61.63889 * 23 10 8 41 41 H 1.09000 * 109.96057 * 300.32729 * 23 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 7 2.2912 2.1519 -1.1356 5 6 2.7023 3.3308 -0.7588 6 6 3.0958 4.4642 -1.6706 7 6 2.7176 3.3583 0.6543 8 6 3.1187 4.4935 1.5028 9 8 4.2772 4.6112 1.8535 10 7 2.2015 5.4018 1.8908 11 6 0.7699 5.3812 1.5398 12 6 0.0746 6.1910 2.6625 13 6 1.1182 7.3068 2.9336 14 8 0.9752 8.3723 1.9920 15 6 0.9922 7.8235 4.3437 16 1 0.2194 7.4387 4.9927 17 6 1.8633 8.7874 4.8051 18 7 2.8046 9.2555 4.0149 19 14 1.7068 9.4284 6.5527 20 1 0.5763 8.7449 7.2312 21 1 2.9648 9.1577 7.2938 22 1 1.4550 10.8915 6.5226 23 6 2.4657 6.5812 2.7360 24 6 2.2798 2.1213 1.0904 25 17 2.1011 1.6175 2.7420 26 1 -0.3635 0.5138 0.8899 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3632 -1.0277 -0.0005 29 1 1.8934 -0.5138 -0.8900 30 1 1.8933 -0.5137 0.8900 31 1 4.1605 4.3975 -1.8944 32 1 2.5251 4.4003 -2.5971 33 1 2.8866 5.4147 -1.1799 34 1 0.3977 4.3568 1.5249 35 1 0.6078 5.8570 0.5727 36 1 -0.0796 5.5765 3.5494 37 1 -0.8675 6.6136 2.3133 38 1 1.6282 9.0781 2.0947 39 1 3.4178 9.9334 4.3396 40 1 3.1748 7.2444 2.2405 41 1 2.8619 6.2661 3.7013 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000844015321.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:18:04 Heat of formation + Delta-G solvation = -15.029894 kcal Electronic energy + Delta-G solvation = -26516.740807 eV Core-core repulsion = 22652.281487 eV Total energy + Delta-G solvation = -3864.459320 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 327.114 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.51549 -39.05462 -37.07585 -37.05374 -35.06227 -34.21205 -32.18313 -31.50165 -30.58597 -29.58636 -27.92262 -27.67236 -25.35477 -23.87839 -22.69484 -21.52637 -20.36300 -19.60449 -18.88443 -17.35178 -17.14763 -16.42222 -15.73610 -15.33107 -15.16954 -14.88152 -14.61769 -14.34864 -14.08508 -13.53058 -13.27837 -12.98196 -12.90468 -12.77846 -12.67564 -12.52984 -12.39516 -12.15367 -11.85517 -11.69665 -11.62991 -11.59554 -11.40214 -11.06527 -10.78397 -10.75296 -10.62304 -10.46567 -10.15305 -9.50482 -9.33403 -9.30941 -8.66710 -8.62598 -8.28251 -7.85664 -6.27930 -4.36098 1.24196 1.38492 2.32878 2.36388 3.04347 3.20926 3.30005 3.33183 3.72486 4.17463 4.28292 4.58675 4.61031 4.82759 4.90495 4.98909 5.10973 5.24706 5.35486 5.38718 5.45094 5.61932 5.71432 5.75285 5.79701 5.80566 5.88292 6.08900 6.18009 6.34625 6.49276 6.52337 6.77854 6.88261 6.99472 7.28458 7.38534 7.39953 7.74490 8.02076 8.23342 8.66495 8.76471 9.31909 9.41641 10.79946 Molecular weight = 327.11amu Principal moments of inertia in cm(-1) A = 0.018607 B = 0.003797 C = 0.003580 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1504.430178 B = 7372.897124 C = 7818.422896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.123 3.877 3 N -0.354 5.354 4 N -0.276 5.276 5 C 0.119 3.881 6 C -0.077 4.077 7 C -0.238 4.238 8 C 0.599 3.401 9 O -0.540 6.540 10 N -0.599 5.599 11 C 0.108 3.892 12 C -0.117 4.117 13 C 0.248 3.752 14 O -0.585 6.585 15 C -0.537 4.537 16 H 0.067 0.933 17 C 0.071 3.929 18 N -0.894 5.894 19 Si 0.902 3.098 20 H -0.272 1.272 21 H -0.282 1.282 22 H -0.282 1.282 23 C 0.105 3.895 24 C 0.153 3.847 25 Cl 0.010 6.990 26 H 0.064 0.936 27 H 0.068 0.932 28 H 0.080 0.920 29 H 0.103 0.897 30 H 0.095 0.905 31 H 0.084 0.916 32 H 0.080 0.920 33 H 0.084 0.916 34 H 0.056 0.944 35 H 0.064 0.936 36 H 0.076 0.924 37 H 0.076 0.924 38 H 0.384 0.616 39 H 0.270 0.730 40 H 0.067 0.933 41 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.067 -16.065 -8.483 18.617 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.002 3.998 3 N -0.137 5.137 4 N -0.099 5.099 5 C -0.047 4.047 6 C -0.136 4.136 7 C -0.254 4.254 8 C 0.384 3.616 9 O -0.418 6.418 10 N -0.332 5.332 11 C -0.016 4.016 12 C -0.155 4.155 13 C 0.208 3.792 14 O -0.394 6.394 15 C -0.575 4.575 16 H 0.085 0.915 17 C -0.132 4.132 18 N -0.534 5.534 19 Si 0.730 3.270 20 H -0.196 1.196 21 H -0.208 1.208 22 H -0.207 1.207 23 C -0.016 4.016 24 C -0.003 4.003 25 Cl 0.038 6.962 26 H 0.083 0.917 27 H 0.088 0.912 28 H 0.099 0.901 29 H 0.121 0.879 30 H 0.113 0.887 31 H 0.103 0.897 32 H 0.099 0.901 33 H 0.103 0.897 34 H 0.074 0.926 35 H 0.082 0.918 36 H 0.094 0.906 37 H 0.094 0.906 38 H 0.235 0.765 39 H 0.080 0.920 40 H 0.086 0.914 41 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -4.073 -17.230 -9.349 20.022 hybrid contribution 0.613 0.934 2.076 2.357 sum -3.461 -16.296 -7.273 18.178 Atomic orbital electron populations 1.22193 0.93584 1.03409 1.03695 1.21844 0.95834 0.77120 1.04992 1.48516 1.50754 1.12476 1.01947 1.77201 1.23558 1.03936 1.05218 1.22285 0.96532 0.94106 0.91776 1.20302 1.02428 0.93412 0.97438 1.19946 1.16429 0.94868 0.94155 1.16714 0.84579 0.80772 0.79520 1.90772 1.18234 1.75927 1.56855 1.48830 1.08621 1.25775 1.49939 1.22226 0.80961 0.99259 0.99109 1.22746 0.98892 0.96887 0.96955 1.19490 0.87665 0.83998 0.88051 1.86091 1.60040 1.35006 1.58294 1.21556 1.16121 1.22656 0.97165 0.91504 1.25060 0.94231 0.95643 0.98278 1.69646 1.17897 1.29426 1.36385 0.86366 0.78158 0.78685 0.83804 1.19620 1.20773 1.20744 1.23132 1.01227 0.84236 0.93041 1.21894 1.02744 0.92081 0.83599 1.98433 1.95988 1.90896 1.10857 0.91667 0.91243 0.90121 0.87911 0.88660 0.89708 0.90137 0.89720 0.92590 0.91750 0.90575 0.90553 0.76500 0.92011 0.91434 0.91411 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.21 10.24 37.16 0.38 -0.83 16 2 C 0.12 1.02 6.97 -4.04 -0.03 0.99 16 3 N -0.35 -4.56 3.58 -57.57 -0.21 -4.76 16 4 N -0.28 -3.95 12.49 33.90 0.42 -3.53 16 5 C 0.12 1.82 7.26 -82.02 -0.60 1.23 16 6 C -0.08 -0.98 10.28 36.00 0.37 -0.61 16 7 C -0.24 -4.11 4.78 -105.02 -0.50 -4.61 16 8 C 0.60 12.41 7.23 -12.57 -0.09 12.32 16 9 O -0.54 -13.11 17.43 5.27 0.09 -13.02 16 10 N -0.60 -12.47 3.34 -171.47 -0.57 -13.04 16 11 C 0.11 1.96 6.67 -2.53 -0.02 1.94 16 12 C -0.12 -2.32 6.22 -24.58 -0.15 -2.48 16 13 C 0.25 5.92 0.85 -89.94 -0.08 5.84 16 14 O -0.58 -14.45 13.07 -35.23 -0.46 -14.91 16 15 C -0.54 -13.87 8.11 -34.44 -0.28 -14.15 16 16 H 0.07 1.71 7.77 -52.49 -0.41 1.30 16 17 C 0.07 1.83 5.27 -17.82 -0.09 1.74 16 18 N -0.89 -23.54 10.96 55.43 0.61 -22.94 16 19 Si 0.90 20.32 29.54 -169.99 -5.02 15.30 16 20 H -0.27 -6.06 7.11 56.52 0.40 -5.66 16 21 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 22 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 23 C 0.10 2.51 5.41 -2.81 -0.02 2.50 16 24 C 0.15 2.29 7.54 -16.44 -0.12 2.17 16 25 Cl 0.01 0.14 28.56 -51.86 -1.48 -1.34 16 26 H 0.06 0.53 8.14 -51.93 -0.42 0.10 16 27 H 0.07 0.56 8.14 -51.93 -0.42 0.13 16 28 H 0.08 0.37 8.14 -51.93 -0.42 -0.05 16 29 H 0.10 0.71 8.14 -51.93 -0.42 0.29 16 30 H 0.10 0.66 7.77 -51.93 -0.40 0.26 16 31 H 0.08 0.99 8.14 -51.93 -0.42 0.57 16 32 H 0.08 0.84 8.14 -51.93 -0.42 0.41 16 33 H 0.08 1.16 8.01 -51.93 -0.42 0.74 16 34 H 0.06 0.91 7.69 -51.93 -0.40 0.51 16 35 H 0.06 1.14 8.14 -51.93 -0.42 0.71 16 36 H 0.08 1.46 8.04 -51.93 -0.42 1.05 16 37 H 0.08 1.44 8.14 -51.93 -0.42 1.01 16 38 H 0.38 9.75 7.23 45.56 0.33 10.08 16 39 H 0.27 6.81 8.31 -40.82 -0.34 6.47 16 40 H 0.07 1.75 8.00 -51.93 -0.42 1.34 16 41 H 0.07 1.77 7.81 -51.93 -0.41 1.37 16 LS Contribution 362.90 15.07 5.47 5.47 Total: -1.00 -30.55 362.90 -7.43 -37.98 By element: Atomic # 1 Polarization: 13.79 SS G_CDS: -5.05 Total: 8.74 kcal Atomic # 6 Polarization: 7.27 SS G_CDS: -1.22 Total: 6.05 kcal Atomic # 7 Polarization: -44.52 SS G_CDS: 0.25 Total: -44.27 kcal Atomic # 8 Polarization: -27.56 SS G_CDS: -0.37 Total: -27.92 kcal Atomic # 14 Polarization: 20.32 SS G_CDS: -5.02 Total: 15.30 kcal Atomic # 17 Polarization: 0.14 SS G_CDS: -1.48 Total: -1.34 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -30.55 -7.43 -37.98 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000844015321.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.946 kcal (2) G-P(sol) polarization free energy of solvation -30.549 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.603 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.976 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.030 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds