Wall clock time and date at job start Tue Mar 31 2020 15:31:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.34775 * 120.00029 * 2 1 4 4 O 1.21696 * 120.00152 * 185.62948 * 3 2 1 5 5 C 1.46674 * 119.99844 * 5.63363 * 3 2 1 6 6 C 1.37884 * 126.22559 * 358.61820 * 5 3 2 7 7 C 1.39888 * 107.09767 * 179.97438 * 6 5 3 8 8 Cl 1.73605 * 126.07542 * 180.02562 * 7 6 5 9 9 C 1.35514 * 107.84914 * 0.02562 * 7 6 5 10 10 N 1.35629 * 108.85270 * 0.22768 * 9 7 6 11 11 C 1.46495 * 125.67451 * 179.77455 * 10 9 7 12 12 C 1.46497 * 120.00157 * 180.02562 * 2 1 3 13 13 H 1.09001 * 110.89171 * 177.56924 * 12 2 1 14 14 C 1.54908 * 111.00527 * 301.45394 * 12 2 1 15 15 N 1.47429 * 104.83555 * 155.08090 * 14 12 2 16 16 C 1.36927 * 125.65012 * 155.83627 * 15 14 12 17 17 H 1.07998 * 120.00049 * 0.02562 * 16 15 14 18 18 C 1.38813 * 120.00039 * 180.02562 * 16 15 14 19 19 N 1.31619 * 120.00148 * 359.97438 * 18 16 15 20 20 Si 1.86803 * 120.00022 * 179.97438 * 18 16 15 21 21 H 1.48500 * 109.47241 * 89.99856 * 20 18 16 22 22 H 1.48501 * 109.46974 * 209.99807 * 20 18 16 23 23 H 1.48500 * 109.47242 * 330.00155 * 20 18 16 24 24 C 1.47025 * 108.69723 * 335.87371 * 15 14 12 25 25 C 1.54315 * 107.27547 * 1.05776 * 24 15 14 26 26 H 1.09005 * 110.71939 * 263.82992 * 25 24 15 27 27 O 1.42903 * 110.72339 * 140.55894 * 25 24 15 28 28 H 1.09002 * 109.46852 * 66.08395 * 1 2 3 29 29 H 1.08998 * 109.47448 * 186.08257 * 1 2 3 30 30 H 1.09002 * 109.47015 * 306.08723 * 1 2 3 31 31 H 1.08005 * 126.45384 * 359.97438 * 6 5 3 32 32 H 1.08002 * 125.56928 * 179.97438 * 9 7 6 33 33 H 1.08997 * 109.47531 * 84.94466 * 11 10 9 34 34 H 1.08998 * 109.47263 * 204.95018 * 11 10 9 35 35 H 1.09009 * 109.47435 * 324.94720 * 11 10 9 36 36 H 1.08996 * 110.36669 * 273.92008 * 14 12 2 37 37 H 1.09006 * 110.36506 * 36.13394 * 14 12 2 38 38 H 0.97001 * 120.00389 * 179.97438 * 19 18 16 39 39 H 1.09003 * 109.87665 * 120.47725 * 24 15 14 40 40 H 1.09004 * 109.88081 * 241.47996 * 24 15 14 41 41 H 0.96700 * 114.00182 * 66.47425 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3514 1.1698 -0.1034 5 6 1.4108 2.4343 0.1247 6 6 0.0433 2.5823 0.2219 7 6 -0.2158 3.9532 0.3233 8 17 -1.7811 4.6895 0.4702 9 6 0.9720 4.6043 0.2866 10 7 1.9680 3.6924 0.1606 11 6 3.3990 3.9957 0.0802 12 6 2.1975 -1.2687 -0.0006 13 1 3.2730 -1.0965 -0.0437 14 6 1.8216 -2.1274 1.2327 15 7 2.0991 -3.5165 0.8241 16 6 2.3697 -4.5584 1.6705 17 1 2.3920 -4.3953 2.7378 18 6 2.6155 -5.8242 1.1565 19 7 2.5879 -6.0232 -0.1443 20 14 2.9854 -7.2454 2.3111 21 1 1.7169 -7.9174 2.6912 22 1 3.8759 -8.2185 1.6288 23 1 3.6574 -6.7302 3.5309 24 6 2.0380 -3.5976 -0.6426 25 6 1.7321 -2.1791 -1.1676 26 1 0.6642 -2.0572 -1.3495 27 8 2.4826 -1.9056 -2.3525 28 1 -0.3633 0.4166 -0.9395 29 1 -0.3634 -1.0218 0.1089 30 1 -0.3633 0.6053 0.8305 31 1 -0.6897 1.7891 0.2200 32 1 1.1037 5.6748 0.3437 33 1 3.8063 4.0958 1.0862 34 1 3.9128 3.1881 -0.4412 35 1 3.5426 4.9290 -0.4644 36 1 2.4388 -1.8532 2.0882 37 1 0.7655 -2.0047 1.4728 38 1 2.7600 -6.9077 -0.5035 39 1 2.9957 -3.9396 -1.0351 40 1 1.2475 -4.2852 -0.9432 41 1 2.2304 -2.4485 -3.1119 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001047451873.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:31:32 Heat of formation + Delta-G solvation = 22.828378 kcal Electronic energy + Delta-G solvation = -26151.353428 eV Core-core repulsion = 22288.535766 eV Total energy + Delta-G solvation = -3862.817662 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 327.114 amu Computer time = 2.24 seconds Orbital eigenvalues (eV) -41.73951 -39.55574 -37.73893 -36.56760 -35.45352 -34.92924 -32.90659 -31.93228 -29.93247 -28.27379 -27.66799 -26.98597 -26.31988 -24.53443 -22.58416 -21.09309 -20.44549 -19.89525 -19.32722 -17.37553 -17.12669 -16.96340 -16.10609 -15.97469 -15.66273 -14.85981 -14.75238 -14.37262 -14.23894 -14.05019 -13.77232 -13.44233 -13.11135 -13.04776 -12.96961 -12.69795 -12.50408 -12.30685 -12.10691 -11.64568 -11.47796 -11.37867 -11.25245 -10.91446 -10.90080 -10.81078 -10.17777 -9.96946 -9.86004 -9.82147 -9.31720 -8.87863 -8.74242 -8.55055 -8.32918 -6.95303 -5.79087 -3.14534 1.27699 1.92474 2.26503 2.56961 3.25989 3.29476 3.37195 3.42547 3.44406 4.39054 4.45055 4.61459 4.66085 4.70900 4.98003 5.04614 5.12393 5.17731 5.34753 5.37488 5.42975 5.51091 5.58181 5.60539 5.66408 5.76531 5.84083 5.99994 6.08386 6.24927 6.43961 6.53774 6.56392 6.78463 6.86946 7.31850 7.43292 7.48034 7.70942 8.13265 8.17074 8.20836 9.11311 9.71450 10.34109 11.32208 Molecular weight = 327.11amu Principal moments of inertia in cm(-1) A = 0.021146 B = 0.002878 C = 0.002784 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1323.822366 B = 9728.203784 C =10054.740292 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.583 5.583 3 C 0.588 3.412 4 O -0.544 6.544 5 C -0.025 4.025 6 C -0.154 4.154 7 C -0.124 4.124 8 Cl -0.053 7.053 9 C 0.027 3.973 10 N -0.403 5.403 11 C 0.062 3.938 12 C 0.135 3.865 13 H 0.117 0.883 14 C 0.132 3.868 15 N -0.599 5.599 16 C -0.231 4.231 17 H 0.081 0.919 18 C -0.006 4.006 19 N -0.922 5.922 20 Si 0.915 3.085 21 H -0.288 1.288 22 H -0.290 1.290 23 H -0.280 1.280 24 C 0.152 3.848 25 C 0.066 3.934 26 H 0.057 0.943 27 O -0.561 6.561 28 H 0.066 0.934 29 H 0.085 0.915 30 H 0.082 0.918 31 H 0.179 0.821 32 H 0.176 0.824 33 H 0.079 0.921 34 H 0.113 0.887 35 H 0.083 0.917 36 H 0.049 0.951 37 H 0.027 0.973 38 H 0.254 0.746 39 H 0.061 0.939 40 H 0.049 0.951 41 H 0.374 0.626 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.345 20.741 -1.755 21.760 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.314 5.314 3 C 0.377 3.623 4 O -0.424 6.424 5 C -0.139 4.139 6 C -0.180 4.180 7 C -0.157 4.157 8 Cl -0.025 7.025 9 C -0.110 4.110 10 N -0.076 5.076 11 C -0.078 4.078 12 C 0.032 3.968 13 H 0.134 0.866 14 C 0.004 3.996 15 N -0.326 5.326 16 C -0.359 4.359 17 H 0.099 0.901 18 C -0.202 4.202 19 N -0.569 5.569 20 Si 0.746 3.254 21 H -0.215 1.215 22 H -0.216 1.216 23 H -0.206 1.206 24 C 0.027 3.973 25 C 0.006 3.994 26 H 0.075 0.925 27 O -0.365 6.365 28 H 0.084 0.916 29 H 0.104 0.896 30 H 0.100 0.900 31 H 0.195 0.805 32 H 0.193 0.807 33 H 0.097 0.903 34 H 0.131 0.869 35 H 0.102 0.898 36 H 0.067 0.933 37 H 0.045 0.955 38 H 0.064 0.936 39 H 0.079 0.921 40 H 0.067 0.933 41 H 0.221 0.779 Dipole moment (debyes) X Y Z Total from point charges -5.080 21.039 -1.449 21.692 hybrid contribution -0.376 -1.021 0.197 1.105 sum -5.456 20.018 -1.252 20.786 Atomic orbital electron populations 1.22531 0.79898 1.04280 1.01867 1.47343 1.06879 1.05271 1.71897 1.16836 0.86287 0.82278 0.76906 1.90770 1.13513 1.86893 1.51197 1.20069 0.91965 0.85898 1.15995 1.22409 0.94216 0.95799 1.05570 1.19973 0.86316 0.93312 1.16134 1.98320 1.24700 1.82406 1.97074 1.21693 0.85901 0.95528 1.07888 1.43791 1.07353 1.04703 1.51748 1.22424 0.76895 1.04281 1.04246 1.22472 0.98395 0.80542 0.95415 0.86552 1.21797 0.98030 0.85610 0.94147 1.44230 1.83378 1.03020 1.02001 1.19069 1.41434 0.86459 0.88969 0.90110 1.24824 1.01620 0.97618 0.96165 1.69930 1.55415 1.21667 1.09896 0.86068 0.77783 0.82033 0.79558 1.21508 1.21602 1.20584 1.21850 1.01839 0.89521 0.84121 1.23566 0.93548 0.97357 0.84971 0.92485 1.86497 1.64001 1.64806 1.21211 0.91566 0.89630 0.90027 0.80455 0.80708 0.90253 0.86884 0.89805 0.93291 0.95508 0.93599 0.92131 0.93293 0.77926 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 48. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.66 7.32 59.85 0.44 1.10 16 2 N -0.58 -9.12 2.91 -173.02 -0.50 -9.63 16 3 C 0.59 9.57 7.64 -12.86 -0.10 9.47 16 4 O -0.54 -10.37 13.95 5.19 0.07 -10.30 16 5 C -0.03 -0.34 6.83 -81.98 -0.56 -0.90 16 6 C -0.15 -1.78 8.87 -39.09 -0.35 -2.12 16 7 C -0.12 -1.33 6.66 -39.94 -0.27 -1.60 16 8 Cl -0.05 -0.51 29.30 -51.86 -1.52 -2.03 16 9 C 0.03 0.26 11.36 -16.85 -0.19 0.07 16 10 N -0.40 -4.58 3.16 -120.19 -0.38 -4.96 16 11 C 0.06 0.57 10.73 59.84 0.64 1.21 16 12 C 0.14 2.56 3.14 -65.78 -0.21 2.36 16 13 H 0.12 2.55 7.02 -51.93 -0.36 2.19 16 14 C 0.13 2.68 6.76 -2.53 -0.02 2.67 16 15 N -0.60 -14.94 3.39 -170.07 -0.58 -15.52 16 16 C -0.23 -6.32 10.28 -15.06 -0.15 -6.48 16 17 H 0.08 2.13 7.83 -52.49 -0.41 1.72 16 18 C -0.01 -0.16 5.49 -17.43 -0.10 -0.26 16 19 N -0.92 -26.42 10.31 55.49 0.57 -25.85 16 20 Si 0.92 21.76 29.55 -169.99 -5.02 16.73 16 21 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 22 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 23 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 24 C 0.15 3.58 5.15 -3.07 -0.02 3.57 16 25 C 0.07 1.24 3.82 -24.90 -0.10 1.15 16 26 H 0.06 0.96 6.65 -51.93 -0.35 0.61 16 27 O -0.56 -10.29 13.39 -35.23 -0.47 -10.76 16 28 H 0.07 0.68 7.40 -51.93 -0.38 0.29 16 29 H 0.09 1.01 6.04 -51.93 -0.31 0.70 16 30 H 0.08 0.81 5.41 -51.93 -0.28 0.53 16 31 H 0.18 1.73 4.05 -52.48 -0.21 1.52 16 32 H 0.18 1.12 8.06 -52.49 -0.42 0.70 16 33 H 0.08 0.65 8.14 -51.93 -0.42 0.23 16 34 H 0.11 1.32 6.03 -51.93 -0.31 1.01 16 35 H 0.08 0.51 8.14 -51.92 -0.42 0.08 16 36 H 0.05 1.01 8.14 -51.93 -0.42 0.59 16 37 H 0.03 0.51 6.67 -51.93 -0.35 0.17 16 38 H 0.25 7.07 8.31 -40.82 -0.34 6.74 16 39 H 0.06 1.62 7.30 -51.93 -0.38 1.24 16 40 H 0.05 1.24 7.50 -51.93 -0.39 0.85 16 41 H 0.37 5.26 9.12 45.56 0.42 5.67 16 LS Contribution 343.13 15.07 5.17 5.17 Total: -1.00 -33.39 343.13 -7.78 -41.17 By element: Atomic # 1 Polarization: 9.90 SS G_CDS: -4.15 Total: 5.75 kcal Atomic # 6 Polarization: 11.20 SS G_CDS: -0.97 Total: 10.23 kcal Atomic # 7 Polarization: -55.07 SS G_CDS: -0.89 Total: -55.96 kcal Atomic # 8 Polarization: -20.66 SS G_CDS: -0.40 Total: -21.06 kcal Atomic # 14 Polarization: 21.76 SS G_CDS: -5.02 Total: 16.73 kcal Atomic # 17 Polarization: -0.51 SS G_CDS: -1.52 Total: -2.03 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -33.39 -7.78 -41.17 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001047451873.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.997 kcal (2) G-P(sol) polarization free energy of solvation -33.391 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.778 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.168 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.24 seconds