Wall clock time and date at job start Tue Mar 31 2020 15:31:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 C 1.35630 * 125.67785 * 2 1 4 4 C 1.35522 * 108.85697 * 179.89231 * 3 2 1 5 5 Cl 1.73595 * 126.07594 * 180.12164 * 4 3 2 6 6 C 1.39890 * 107.84522 * 0.37265 * 4 3 2 7 7 C 1.37643 * 125.68030 * 180.31357 * 2 1 3 8 8 C 1.46672 * 126.21853 * 359.93807 * 7 2 1 9 9 O 1.21695 * 119.99915 * 5.05969 * 8 7 2 10 10 N 1.34773 * 119.99658 * 185.06366 * 8 7 2 11 11 C 1.46499 * 119.99528 * 185.21648 * 10 8 7 12 12 C 1.53006 * 109.47091 * 179.97438 * 11 10 8 13 13 H 1.08994 * 109.68124 * 300.76830 * 12 11 10 14 14 C 1.53291 * 109.68486 * 180.24268 * 12 11 10 15 15 O 1.42960 * 109.22303 * 187.97709 * 14 12 11 16 16 C 1.42960 * 114.16740 * 62.58656 * 15 14 12 17 17 C 1.53303 * 109.21922 * 297.41564 * 16 15 14 18 18 N 1.47155 * 109.67931 * 61.28180 * 12 11 10 19 19 C 1.36946 * 120.97890 * 350.23572 * 18 12 11 20 20 H 1.07994 * 119.99983 * 31.53873 * 19 18 12 21 21 C 1.38812 * 119.99544 * 211.53483 * 19 18 12 22 22 N 1.31619 * 120.00535 * 9.83687 * 21 19 18 23 23 Si 1.86803 * 119.99845 * 189.82969 * 21 19 18 24 24 H 1.48499 * 109.46820 * 90.00476 * 23 21 19 25 25 H 1.48500 * 109.46967 * 210.00250 * 23 21 19 26 26 H 1.48501 * 109.47123 * 330.00663 * 23 21 19 27 27 H 1.08999 * 109.46902 * 263.84719 * 1 2 3 28 28 H 1.09004 * 109.47455 * 143.84674 * 1 2 3 29 29 H 1.09002 * 109.47653 * 23.84815 * 1 2 3 30 30 H 1.08009 * 125.57156 * 0.04064 * 3 2 1 31 31 H 1.08002 * 126.44753 * 179.81333 * 6 4 3 32 32 H 0.96993 * 120.00297 * 5.21300 * 10 8 7 33 33 H 1.08997 * 109.47595 * 299.99543 * 11 10 8 34 34 H 1.09001 * 109.47260 * 59.99959 * 11 10 8 35 35 H 1.09000 * 109.51680 * 307.90563 * 14 12 11 36 36 H 1.09004 * 109.50987 * 68.00579 * 14 12 11 37 37 H 1.08996 * 109.51584 * 57.33768 * 16 15 14 38 38 H 1.08997 * 109.51263 * 177.49841 * 16 15 14 39 39 H 1.09003 * 109.67517 * 172.02524 * 17 16 15 40 40 H 1.08998 * 109.68150 * 292.58024 * 17 16 15 41 41 H 0.96998 * 120.00630 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2559 1.1017 0.0000 4 6 3.5532 0.7096 0.0024 5 17 4.9377 1.7568 0.0064 6 6 3.5782 -0.6891 -0.0047 7 6 2.2677 -1.1180 -0.0061 8 6 1.8120 -2.5122 -0.0125 9 8 0.6250 -2.7639 -0.1056 10 7 2.7079 -3.5143 0.0849 11 6 2.2662 -4.9059 -0.0361 12 6 3.4707 -5.8379 0.1103 13 1 4.2058 -5.6118 -0.6621 14 6 3.0149 -7.2955 -0.0217 15 8 4.1064 -8.1610 0.2998 16 6 4.5761 -8.0359 1.6442 17 6 5.1121 -6.6162 1.8615 18 7 4.0771 -5.6590 1.4391 19 6 3.6894 -4.6325 2.2584 20 1 2.6733 -4.2685 2.2241 21 6 4.6027 -4.0598 3.1330 22 7 5.8801 -4.3643 3.0432 23 14 4.0189 -2.8568 4.4374 24 1 3.6740 -3.5992 5.6764 25 1 5.0992 -1.8808 4.7296 26 1 2.8193 -2.1344 3.9431 27 1 -0.3633 -0.1101 1.0217 28 1 -0.3634 -0.8298 -0.6063 29 1 -0.3634 0.9399 -0.4155 30 1 1.9088 2.1245 0.0006 31 1 4.4583 -1.3151 -0.0077 32 1 3.6450 -3.3143 0.2351 33 1 1.5392 -5.1257 0.7457 34 1 1.8065 -5.0575 -1.0127 35 1 2.1882 -7.4820 0.6639 36 1 2.6890 -7.4838 -1.0447 37 1 3.7552 -8.2250 2.3358 38 1 5.3744 -8.7571 1.8195 39 1 5.3408 -6.4677 2.9169 40 1 6.0129 -6.4686 1.2658 41 1 6.5183 -3.9639 3.6541 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001051013984.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:31:37 Heat of formation + Delta-G solvation = -4.930593 kcal Electronic energy + Delta-G solvation = -26640.981755 eV Core-core repulsion = 22776.960373 eV Total energy + Delta-G solvation = -3864.021382 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 327.114 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.31983 -39.05397 -38.14282 -36.28244 -35.36138 -33.73314 -32.70056 -31.57686 -30.51304 -29.19504 -27.20125 -26.42464 -25.51617 -23.46445 -22.50695 -21.51001 -20.45683 -19.78018 -19.27714 -17.86877 -16.65173 -15.95816 -15.88137 -15.51145 -15.43287 -14.94393 -14.61453 -14.27807 -14.08944 -13.84253 -13.74850 -13.62594 -13.27825 -12.99560 -12.82006 -12.78542 -12.64605 -12.14862 -11.92309 -11.58751 -11.34167 -11.03575 -10.89501 -10.77925 -10.74146 -10.43171 -10.23627 -10.07017 -9.70576 -9.62164 -9.01096 -8.71294 -8.56988 -8.42945 -8.05619 -6.73841 -5.91274 -3.42032 1.59750 2.21332 2.57532 2.93530 3.30481 3.39463 3.40726 3.67900 3.83109 4.34853 4.51656 4.78887 4.89302 5.07726 5.16493 5.23645 5.27517 5.35014 5.54642 5.55827 5.69814 5.78005 5.82130 5.97381 6.01584 6.11547 6.13675 6.19513 6.32094 6.50172 6.56711 6.71845 6.86100 6.99979 7.06331 7.10508 7.48753 7.69850 7.85189 8.09754 8.28452 8.66165 9.05122 9.65033 10.23959 11.15025 Molecular weight = 327.11amu Principal moments of inertia in cm(-1) A = 0.012326 B = 0.004613 C = 0.003976 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2271.133843 B = 6068.258680 C = 7039.773955 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.071 3.929 2 N -0.407 5.407 3 C 0.022 3.978 4 C -0.121 4.121 5 Cl -0.055 7.055 6 C -0.124 4.124 7 C -0.025 4.025 8 C 0.583 3.417 9 O -0.569 6.569 10 N -0.678 5.678 11 C 0.138 3.862 12 C 0.124 3.876 13 H 0.043 0.957 14 C 0.057 3.943 15 O -0.392 6.392 16 C 0.034 3.966 17 C 0.144 3.856 18 N -0.591 5.591 19 C -0.259 4.259 20 H 0.073 0.927 21 C 0.015 3.985 22 N -0.897 5.897 23 Si 0.895 3.105 24 H -0.287 1.287 25 H -0.288 1.288 26 H -0.278 1.278 27 H 0.077 0.923 28 H 0.104 0.896 29 H 0.082 0.918 30 H 0.175 0.825 31 H 0.157 0.843 32 H 0.418 0.582 33 H 0.070 0.930 34 H 0.061 0.939 35 H 0.047 0.953 36 H 0.083 0.917 37 H 0.040 0.960 38 H 0.079 0.921 39 H 0.093 0.907 40 H 0.030 0.970 41 H 0.256 0.744 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.194 6.375 -6.717 11.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.080 5.080 3 C -0.115 4.115 4 C -0.154 4.154 5 Cl -0.027 7.027 6 C -0.150 4.150 7 C -0.138 4.138 8 C 0.369 3.631 9 O -0.451 6.451 10 N -0.328 5.328 11 C 0.014 3.986 12 C 0.017 3.983 13 H 0.060 0.940 14 C -0.023 4.023 15 O -0.311 6.311 16 C -0.043 4.043 17 C 0.019 3.981 18 N -0.317 5.317 19 C -0.388 4.388 20 H 0.090 0.910 21 C -0.185 4.185 22 N -0.541 5.541 23 Si 0.724 3.276 24 H -0.214 1.214 25 H -0.214 1.214 26 H -0.203 1.203 27 H 0.096 0.904 28 H 0.123 0.877 29 H 0.101 0.899 30 H 0.192 0.808 31 H 0.174 0.826 32 H 0.257 0.743 33 H 0.088 0.912 34 H 0.079 0.921 35 H 0.065 0.935 36 H 0.101 0.899 37 H 0.059 0.941 38 H 0.098 0.902 39 H 0.111 0.889 40 H 0.048 0.952 41 H 0.066 0.934 Dipole moment (debyes) X Y Z Total from point charges -7.060 6.170 -6.817 11.592 hybrid contribution 0.345 1.173 1.229 1.733 sum -6.715 7.342 -5.588 11.412 Atomic orbital electron populations 1.22266 0.75472 1.04695 1.04520 1.43726 1.06947 1.04589 1.52719 1.21601 0.88985 0.91978 1.08934 1.19875 0.87756 0.91396 1.16357 1.98310 1.41036 1.65611 1.97719 1.21338 0.95749 0.93151 1.04734 1.20157 0.89451 0.88267 1.15962 1.16811 0.85704 0.83265 0.77272 1.90723 1.16212 1.84936 1.53270 1.45689 1.12297 1.05108 1.69749 1.21210 0.96965 0.79948 1.00461 1.21439 0.93600 0.92848 0.90401 0.93980 1.22850 0.89012 0.90646 0.99756 1.87802 1.51297 1.61259 1.30717 1.23363 0.98033 1.00317 0.82630 1.21427 0.90240 0.84594 1.01887 1.44078 1.45166 1.30710 1.11706 1.19195 0.94248 1.09803 1.15541 0.90988 1.25120 0.94892 0.98063 1.00461 1.69958 1.00483 1.45414 1.38201 0.86402 0.78092 0.80990 0.82102 1.21428 1.21361 1.20297 0.90434 0.87741 0.89926 0.80823 0.82566 0.74251 0.91165 0.92109 0.93507 0.89905 0.94133 0.90237 0.88919 0.95207 0.93358 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.80 10.48 59.84 0.63 1.42 16 2 N -0.41 -5.82 3.16 -120.19 -0.38 -6.20 16 3 C 0.02 0.28 11.35 -16.84 -0.19 0.09 16 4 C -0.12 -1.80 6.66 -39.93 -0.27 -2.06 16 5 Cl -0.06 -0.76 29.30 -51.86 -1.52 -2.28 16 6 C -0.12 -2.05 10.34 -39.09 -0.40 -2.45 16 7 C -0.02 -0.42 6.88 -81.98 -0.56 -0.98 16 8 C 0.58 10.86 7.77 -12.86 -0.10 10.76 16 9 O -0.57 -11.33 14.78 5.19 0.08 -11.25 16 10 N -0.68 -12.62 3.78 -61.62 -0.23 -12.85 16 11 C 0.14 2.47 4.45 -4.04 -0.02 2.45 16 12 C 0.12 2.35 3.20 -67.42 -0.22 2.14 16 13 H 0.04 0.83 8.14 -51.93 -0.42 0.41 16 14 C 0.06 0.97 6.29 37.31 0.23 1.20 16 15 O -0.39 -7.47 10.74 -35.23 -0.38 -7.85 16 16 C 0.03 0.65 6.99 37.31 0.26 0.91 16 17 C 0.14 3.21 5.37 -3.52 -0.02 3.19 16 18 N -0.59 -13.30 3.03 -164.29 -0.50 -13.79 16 19 C -0.26 -6.31 7.09 -15.05 -0.11 -6.42 16 20 H 0.07 1.81 5.83 -52.49 -0.31 1.50 16 21 C 0.01 0.38 5.08 -17.43 -0.09 0.29 16 22 N -0.90 -23.94 11.11 55.49 0.62 -23.33 16 23 Si 0.89 21.13 29.56 -169.99 -5.03 16.10 16 24 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 25 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 26 H -0.28 -6.65 7.11 56.52 0.40 -6.24 16 27 H 0.08 0.86 8.14 -51.93 -0.42 0.44 16 28 H 0.10 1.31 6.56 -51.93 -0.34 0.97 16 29 H 0.08 0.62 8.12 -51.93 -0.42 0.20 16 30 H 0.17 1.60 8.06 -52.48 -0.42 1.18 16 31 H 0.16 2.58 7.49 -52.49 -0.39 2.19 16 32 H 0.42 8.20 6.32 -40.82 -0.26 7.94 16 33 H 0.07 1.36 7.53 -51.93 -0.39 0.97 16 34 H 0.06 0.96 8.14 -51.93 -0.42 0.54 16 35 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 36 H 0.08 1.18 8.14 -51.93 -0.42 0.76 16 37 H 0.04 0.76 8.14 -51.93 -0.42 0.34 16 38 H 0.08 1.33 8.14 -51.93 -0.42 0.91 16 39 H 0.09 2.29 6.33 -51.93 -0.33 1.96 16 40 H 0.03 0.71 8.14 -51.93 -0.42 0.29 16 41 H 0.26 6.75 8.31 -40.82 -0.34 6.42 16 LS Contribution 348.41 15.07 5.25 5.25 Total: -1.00 -29.17 348.41 -8.32 -37.49 By element: Atomic # 1 Polarization: 13.55 SS G_CDS: -5.38 Total: 8.17 kcal Atomic # 6 Polarization: 11.39 SS G_CDS: -0.85 Total: 10.54 kcal Atomic # 7 Polarization: -55.68 SS G_CDS: -0.50 Total: -56.18 kcal Atomic # 8 Polarization: -18.80 SS G_CDS: -0.30 Total: -19.10 kcal Atomic # 14 Polarization: 21.13 SS G_CDS: -5.03 Total: 16.10 kcal Atomic # 17 Polarization: -0.76 SS G_CDS: -1.52 Total: -2.28 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -29.17 -8.32 -37.49 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001051013984.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.559 kcal (2) G-P(sol) polarization free energy of solvation -29.169 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.390 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.321 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.490 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.931 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds