Wall clock time and date at job start Tue Mar 31 2020 15:31:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.35630 * 125.67623 * 2 1 4 4 C 1.35516 * 108.84994 * 180.23584 * 3 2 1 5 5 Cl 1.73605 * 126.07434 * 179.79051 * 4 3 2 6 6 C 1.39892 * 107.85434 * 359.76666 * 4 3 2 7 7 C 1.37642 * 125.67394 * 179.83179 * 2 1 3 8 8 C 1.46667 * 126.22124 * 0.03595 * 7 2 1 9 9 O 1.21688 * 120.00354 * 4.55610 * 8 7 2 10 10 N 1.34781 * 119.99587 * 184.55536 * 8 7 2 11 11 C 1.46497 * 119.99967 * 174.85742 * 10 8 7 12 12 C 1.52999 * 109.47344 * 179.97438 * 11 10 8 13 13 H 1.08998 * 109.67334 * 59.92447 * 12 11 10 14 14 C 1.53297 * 109.71296 * 180.45984 * 12 11 10 15 15 O 1.42968 * 109.21979 * 172.04465 * 14 12 11 16 16 C 1.42960 * 114.16923 * 297.42115 * 15 14 12 17 17 C 1.52881 * 109.29602 * 62.44701 * 16 15 14 18 18 N 1.47144 * 108.61034 * 307.93692 * 17 16 15 19 19 C 1.36943 * 120.98122 * 230.50310 * 18 17 16 20 20 H 1.07999 * 120.00021 * 147.93016 * 19 18 17 21 21 C 1.38809 * 119.99841 * 327.92206 * 19 18 17 22 22 N 1.31621 * 120.00330 * 349.93112 * 21 19 18 23 23 Si 1.86806 * 119.99929 * 169.92423 * 21 19 18 24 24 H 1.48499 * 109.46817 * 270.00242 * 23 21 19 25 25 H 1.48491 * 109.46894 * 30.00087 * 23 21 19 26 26 H 1.48498 * 109.47042 * 150.00238 * 23 21 19 27 27 H 1.09006 * 109.46929 * 273.52402 * 1 2 3 28 28 H 1.08998 * 109.47286 * 33.52609 * 1 2 3 29 29 H 1.09003 * 109.47564 * 153.52225 * 1 2 3 30 30 H 1.08000 * 125.57636 * 0.02562 * 3 2 1 31 31 H 1.07997 * 126.45489 * 180.02562 * 6 4 3 32 32 H 0.96997 * 120.00139 * 354.86200 * 10 8 7 33 33 H 1.09004 * 109.46939 * 60.00380 * 11 10 8 34 34 H 1.08995 * 109.47055 * 300.00432 * 11 10 8 35 35 H 1.09000 * 109.51469 * 291.96806 * 14 12 11 36 36 H 1.08999 * 109.51300 * 52.12370 * 14 12 11 37 37 H 1.08992 * 109.51137 * 182.50883 * 16 15 14 38 38 H 1.09003 * 109.51013 * 302.65866 * 16 15 14 39 39 H 1.09006 * 109.61385 * 188.11281 * 17 16 15 40 40 H 1.08997 * 109.52013 * 67.70746 * 17 16 15 41 41 H 0.96999 * 120.00076 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2560 1.1018 0.0000 4 6 3.5531 0.7095 -0.0053 5 17 4.9377 1.7567 -0.0125 6 6 3.5782 -0.6892 -0.0033 7 6 2.2677 -1.1181 0.0033 8 6 1.8119 -2.5122 0.0066 9 8 0.6244 -2.7643 -0.0770 10 7 2.7084 -3.5140 0.1024 11 6 2.2484 -4.9000 0.2193 12 6 3.4577 -5.8327 0.3112 13 1 4.0551 -5.5740 1.1854 14 6 2.9826 -7.2859 0.4222 15 8 4.1103 -8.1589 0.3207 16 6 4.7976 -8.0841 -0.9306 17 6 5.3620 -6.6751 -1.1136 18 7 4.2767 -5.7037 -0.9045 19 6 4.0324 -4.7124 -1.8172 20 1 3.0247 -4.3551 -1.9696 21 6 5.0800 -4.1668 -2.5463 22 7 6.3241 -4.4541 -2.2268 23 14 4.7241 -3.0247 -3.9811 24 1 4.5987 -3.8211 -5.2283 25 1 3.4554 -2.2951 -3.7301 26 1 5.8353 -2.0503 -4.1256 27 1 -0.3633 0.0632 1.0258 28 1 -0.3634 0.8567 -0.5676 29 1 -0.3634 -0.9199 -0.4582 30 1 1.9089 2.1245 0.0004 31 1 4.4582 -1.3152 -0.0060 32 1 3.6582 -3.3173 0.0939 33 1 1.6547 -5.1608 -0.6569 34 1 1.6384 -5.0058 1.1163 35 1 2.4914 -7.4360 1.3836 36 1 2.2811 -7.5022 -0.3836 37 1 5.6120 -8.8084 -0.9425 38 1 4.1026 -8.3033 -1.7413 39 1 5.7606 -6.5688 -2.1226 40 1 6.1544 -6.5028 -0.3854 41 1 7.0561 -4.0731 -2.7366 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001051013985.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:31:39 Heat of formation + Delta-G solvation = -4.506631 kcal Electronic energy + Delta-G solvation = -26661.522064 eV Core-core repulsion = 22797.519066 eV Total energy + Delta-G solvation = -3864.002997 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 327.114 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.31518 -39.06141 -38.15244 -36.26929 -35.37153 -33.72880 -32.69277 -31.57566 -30.53550 -29.19216 -27.21778 -26.41577 -25.51279 -23.46994 -22.50032 -21.51065 -20.43793 -19.77713 -19.28615 -17.85621 -16.65051 -15.98129 -15.84896 -15.54410 -15.40296 -14.94250 -14.62123 -14.28951 -14.07749 -13.83915 -13.73525 -13.64130 -13.29355 -12.99547 -12.84101 -12.77157 -12.63903 -12.11290 -11.91213 -11.59131 -11.33876 -11.03626 -10.89080 -10.77990 -10.72969 -10.42870 -10.23278 -10.07826 -9.69637 -9.60647 -9.01757 -8.71590 -8.56031 -8.42569 -8.04901 -6.73496 -5.91618 -3.42740 1.59763 2.22596 2.58205 2.94578 3.31013 3.40255 3.42021 3.68138 3.82902 4.34903 4.51362 4.83004 4.90158 5.07561 5.16263 5.19429 5.27181 5.36627 5.54742 5.57964 5.69505 5.80333 5.82391 5.97335 6.01429 6.13108 6.13555 6.19780 6.32867 6.49946 6.58527 6.71890 6.87782 7.00199 7.05419 7.11241 7.47771 7.69850 7.84813 8.10147 8.28297 8.66459 9.04796 9.64686 10.23897 11.14637 Molecular weight = 327.11amu Principal moments of inertia in cm(-1) A = 0.012383 B = 0.004701 C = 0.003944 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2260.672778 B = 5954.973416 C = 7097.689395 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.407 5.407 3 C 0.021 3.979 4 C -0.121 4.121 5 Cl -0.055 7.055 6 C -0.123 4.123 7 C -0.026 4.026 8 C 0.583 3.417 9 O -0.570 6.570 10 N -0.677 5.677 11 C 0.138 3.862 12 C 0.124 3.876 13 H 0.043 0.957 14 C 0.056 3.944 15 O -0.392 6.392 16 C 0.035 3.965 17 C 0.144 3.856 18 N -0.590 5.590 19 C -0.260 4.260 20 H 0.073 0.927 21 C 0.015 3.985 22 N -0.896 5.896 23 Si 0.893 3.107 24 H -0.287 1.287 25 H -0.276 1.276 26 H -0.287 1.287 27 H 0.075 0.925 28 H 0.080 0.920 29 H 0.112 0.888 30 H 0.174 0.826 31 H 0.158 0.842 32 H 0.419 0.581 33 H 0.070 0.930 34 H 0.061 0.939 35 H 0.083 0.917 36 H 0.047 0.953 37 H 0.080 0.920 38 H 0.040 0.960 39 H 0.091 0.909 40 H 0.030 0.970 41 H 0.256 0.744 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.181 6.517 5.532 11.164 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.080 5.080 3 C -0.115 4.115 4 C -0.154 4.154 5 Cl -0.027 7.027 6 C -0.149 4.149 7 C -0.139 4.139 8 C 0.370 3.630 9 O -0.452 6.452 10 N -0.328 5.328 11 C 0.014 3.986 12 C 0.017 3.983 13 H 0.060 0.940 14 C -0.023 4.023 15 O -0.311 6.311 16 C -0.043 4.043 17 C 0.019 3.981 18 N -0.316 5.316 19 C -0.389 4.389 20 H 0.090 0.910 21 C -0.185 4.185 22 N -0.539 5.539 23 Si 0.722 3.278 24 H -0.214 1.214 25 H -0.201 1.201 26 H -0.213 1.213 27 H 0.094 0.906 28 H 0.099 0.901 29 H 0.130 0.870 30 H 0.192 0.808 31 H 0.176 0.824 32 H 0.258 0.742 33 H 0.088 0.912 34 H 0.079 0.921 35 H 0.101 0.899 36 H 0.065 0.935 37 H 0.098 0.902 38 H 0.058 0.942 39 H 0.110 0.890 40 H 0.048 0.952 41 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges -8.051 6.315 5.559 11.645 hybrid contribution 0.539 1.131 -1.184 1.724 sum -7.512 7.446 4.375 11.446 Atomic orbital electron populations 1.22353 0.75525 1.05958 1.03687 1.43723 1.06922 1.04549 1.52805 1.21591 0.88979 0.92005 1.08942 1.19888 0.87755 0.91418 1.16335 1.98311 1.41048 1.65604 1.97715 1.21394 0.95856 0.93169 1.04472 1.20149 0.89455 0.88261 1.16079 1.16808 0.85690 0.83271 0.77233 1.90699 1.16450 1.84847 1.53235 1.45710 1.10807 1.05433 1.70835 1.21206 0.96272 0.80154 1.00955 1.21437 0.92036 0.92921 0.91884 0.93970 1.22857 0.88165 0.90552 1.00703 1.87806 1.44084 1.62131 1.37050 1.23283 0.95655 1.00363 0.85003 1.21323 0.89759 0.84590 1.02474 1.44051 1.36186 1.32298 1.19092 1.19197 0.92614 1.12413 1.14699 0.90988 1.25130 0.95257 0.98140 0.99965 1.69968 0.97685 1.46171 1.40106 0.86424 0.77826 0.80670 0.82848 1.21425 1.20143 1.21307 0.90620 0.90086 0.86997 0.80840 0.82402 0.74178 0.91185 0.92104 0.89905 0.93492 0.90208 0.94163 0.89049 0.95219 0.93348 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.72 10.73 59.85 0.64 1.37 16 2 N -0.41 -5.81 3.16 -120.19 -0.38 -6.19 16 3 C 0.02 0.28 11.36 -16.85 -0.19 0.08 16 4 C -0.12 -1.82 6.66 -39.93 -0.27 -2.09 16 5 Cl -0.06 -0.77 29.30 -51.86 -1.52 -2.29 16 6 C -0.12 -2.07 10.35 -39.09 -0.40 -2.48 16 7 C -0.03 -0.44 6.89 -81.98 -0.56 -1.00 16 8 C 0.58 10.88 7.77 -12.86 -0.10 10.78 16 9 O -0.57 -11.32 14.59 5.20 0.08 -11.24 16 10 N -0.68 -12.62 3.77 -61.62 -0.23 -12.85 16 11 C 0.14 2.46 4.46 -4.04 -0.02 2.45 16 12 C 0.12 2.35 3.21 -67.42 -0.22 2.14 16 13 H 0.04 0.83 8.14 -51.93 -0.42 0.41 16 14 C 0.06 0.96 6.29 37.31 0.23 1.20 16 15 O -0.39 -7.46 10.74 -35.23 -0.38 -7.84 16 16 C 0.03 0.66 6.97 37.10 0.26 0.92 16 17 C 0.14 3.21 5.34 -3.75 -0.02 3.19 16 18 N -0.59 -13.25 3.03 -164.56 -0.50 -13.75 16 19 C -0.26 -6.32 7.03 -15.06 -0.11 -6.42 16 20 H 0.07 1.80 5.84 -52.49 -0.31 1.49 16 21 C 0.02 0.39 5.07 -17.43 -0.09 0.30 16 22 N -0.90 -23.80 11.16 55.49 0.62 -23.19 16 23 Si 0.89 21.02 29.57 -169.99 -5.03 16.00 16 24 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 25 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 26 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 27 H 0.08 0.72 8.14 -51.93 -0.42 0.30 16 28 H 0.08 0.65 8.14 -51.93 -0.42 0.23 16 29 H 0.11 1.49 6.04 -51.93 -0.31 1.17 16 30 H 0.17 1.61 8.06 -52.49 -0.42 1.18 16 31 H 0.16 2.73 7.45 -52.49 -0.39 2.34 16 32 H 0.42 8.23 6.22 -40.82 -0.25 7.97 16 33 H 0.07 1.35 7.56 -51.93 -0.39 0.96 16 34 H 0.06 0.96 8.14 -51.93 -0.42 0.54 16 35 H 0.08 1.18 8.14 -51.93 -0.42 0.76 16 36 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 37 H 0.08 1.33 8.14 -51.93 -0.42 0.91 16 38 H 0.04 0.76 8.14 -51.93 -0.42 0.33 16 39 H 0.09 2.25 6.38 -51.93 -0.33 1.92 16 40 H 0.03 0.71 8.14 -51.93 -0.42 0.29 16 41 H 0.26 6.73 8.31 -40.82 -0.34 6.39 16 LS Contribution 347.89 15.07 5.24 5.24 Total: -1.00 -28.94 347.89 -8.29 -37.23 By element: Atomic # 1 Polarization: 13.80 SS G_CDS: -5.35 Total: 8.45 kcal Atomic # 6 Polarization: 11.27 SS G_CDS: -0.84 Total: 10.43 kcal Atomic # 7 Polarization: -55.48 SS G_CDS: -0.49 Total: -55.97 kcal Atomic # 8 Polarization: -18.78 SS G_CDS: -0.30 Total: -19.08 kcal Atomic # 14 Polarization: 21.02 SS G_CDS: -5.03 Total: 16.00 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.52 Total: -2.29 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -28.94 -8.29 -37.23 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001051013985.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.724 kcal (2) G-P(sol) polarization free energy of solvation -28.942 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.231 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds