Wall clock time and date at job start Tue Mar 31 2020 15:28:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45198 * 109.47000 * 2 1 4 4 C 1.34230 * 116.99340 * 179.97438 * 3 2 1 5 5 O 1.20823 * 120.00644 * 0.02562 * 4 3 2 6 6 C 1.50704 * 119.99630 * 179.97438 * 4 3 2 7 7 N 1.46897 * 109.47063 * 174.80928 * 6 4 3 8 8 C 1.46897 * 111.00348 * 289.31033 * 7 6 4 9 9 C 1.50701 * 109.47610 * 160.44881 * 8 7 6 10 10 H 1.08003 * 119.99728 * 355.56826 * 9 8 7 11 11 C 1.37875 * 120.00485 * 175.57525 * 9 8 7 12 12 N 1.31508 * 120.00213 * 180.02562 * 11 9 8 13 13 Si 1.86805 * 119.99864 * 359.97438 * 11 9 8 14 14 H 1.48496 * 109.46935 * 90.00235 * 13 11 9 15 15 H 1.48497 * 109.47182 * 210.00319 * 13 11 9 16 16 H 1.48496 * 109.47055 * 330.00639 * 13 11 9 17 17 C 1.39056 * 110.99965 * 165.35418 * 7 6 4 18 18 N 1.32625 * 120.10419 * 65.09364 * 17 7 6 19 19 C 1.32254 * 119.93053 * 180.25032 * 18 17 7 20 20 C 1.50703 * 119.93211 * 179.72415 * 19 18 17 21 21 C 1.38136 * 120.13574 * 359.45464 * 19 18 17 22 22 C 1.50700 * 119.89952 * 180.27473 * 21 19 18 23 23 N 1.32294 * 120.20572 * 0.24858 * 21 19 18 24 24 C 1.32016 * 120.06817 * 0.02562 * 23 21 19 25 25 Cl 1.73599 * 120.06879 * 179.97438 * 24 23 21 26 26 H 1.09004 * 109.46715 * 299.99929 * 1 2 3 27 27 H 1.08996 * 109.47179 * 59.99249 * 1 2 3 28 28 H 1.08996 * 109.46983 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.46715 * 240.00071 * 2 1 3 30 30 H 1.08996 * 109.46817 * 120.00347 * 2 1 3 31 31 H 1.09006 * 109.46786 * 54.81183 * 6 4 3 32 32 H 1.08998 * 109.47850 * 294.81398 * 6 4 3 33 33 H 1.09011 * 109.46982 * 280.44489 * 8 7 6 34 34 H 1.09004 * 109.47324 * 40.44265 * 8 7 6 35 35 H 0.97003 * 120.00040 * 179.97438 * 12 11 9 36 36 H 1.09004 * 109.47257 * 269.72559 * 20 19 18 37 37 H 1.08997 * 109.47377 * 29.72808 * 20 19 18 38 38 H 1.09002 * 109.46918 * 149.72692 * 20 19 18 39 39 H 1.09002 * 109.47413 * 89.99557 * 22 21 19 40 40 H 1.09004 * 109.47224 * 209.99784 * 22 21 19 41 41 H 1.08999 * 109.47351 * 329.99570 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9208 2.9373 0.0000 7 7 5.3825 2.8626 0.1260 8 6 5.7732 2.4287 1.4740 9 6 7.1863 1.9058 1.4436 10 1 7.7139 1.8298 0.5043 11 6 7.8056 1.5243 2.6149 12 7 9.0389 1.0685 2.5884 13 14 6.8933 1.6563 4.2397 14 1 6.1656 0.3889 4.5030 15 1 7.8653 1.9056 5.3343 16 1 5.9238 2.7791 4.1732 17 6 5.9733 4.0793 -0.1967 18 7 5.7492 5.1480 0.5561 19 6 6.3089 6.3047 0.2431 20 6 6.0494 7.5205 1.0949 21 6 7.1355 6.3994 -0.8596 22 6 7.7754 7.7186 -1.2077 23 7 7.3674 5.3354 -1.6108 24 6 6.8086 4.1781 -1.3090 25 17 7.1124 2.7820 -2.2952 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3633 -1.0276 0.0005 29 1 1.8933 -0.5139 -0.8900 30 1 1.8933 -0.5139 0.8899 31 1 3.5120 3.4999 0.8394 32 1 3.6617 3.4374 -0.9332 33 1 5.7134 3.2742 2.1594 34 1 5.1009 1.6396 1.8109 35 1 9.4747 0.8005 3.4125 36 1 5.1771 8.0517 0.7138 37 1 5.8654 7.2110 2.1237 38 1 6.9179 8.1784 1.0633 39 1 8.7394 7.7987 -0.7052 40 1 7.9219 7.7780 -2.2862 41 1 7.1279 8.5333 -0.8836 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001157159575.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:28:52 Heat of formation + Delta-G solvation = -27.139691 kcal Electronic energy + Delta-G solvation = -26235.388667 eV Core-core repulsion = 22370.404226 eV Total energy + Delta-G solvation = -3864.984440 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 327.114 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.16217 -40.11163 -37.47205 -36.24858 -35.97206 -34.08191 -33.08444 -32.41114 -31.71580 -28.92136 -28.71103 -27.75001 -25.40485 -23.35818 -23.07678 -22.31982 -21.25054 -20.24121 -18.06247 -17.54163 -16.82076 -16.44250 -16.31862 -15.99917 -15.64631 -15.30739 -14.60939 -14.10614 -13.98874 -13.68981 -13.21244 -13.09651 -12.99575 -12.92709 -12.81478 -12.73252 -12.52560 -12.34391 -12.03902 -11.90019 -11.54985 -11.52970 -11.39582 -11.27819 -10.78086 -10.70188 -10.53496 -10.38465 -10.32560 -10.13682 -9.92984 -9.35863 -9.05626 -8.54486 -8.38439 -7.99635 -6.01973 -3.98852 0.87300 1.26171 2.22493 2.60792 2.73251 3.28895 3.35147 3.36630 3.68811 3.96864 4.30035 4.40883 4.43209 4.74991 4.88850 4.92140 4.95872 5.04181 5.17686 5.28487 5.28807 5.34850 5.47888 5.48251 5.52605 5.58102 5.66709 5.68966 5.73454 5.81839 5.87798 5.89237 6.28214 6.54024 6.65924 6.81937 7.26589 7.36167 7.61794 7.71633 7.93604 8.18066 8.60045 9.10052 9.57775 11.11020 Molecular weight = 327.11amu Principal moments of inertia in cm(-1) A = 0.008589 B = 0.005591 C = 0.004388 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3259.269299 B = 5006.730046 C = 6378.784172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.062 3.938 3 O -0.368 6.368 4 C 0.455 3.545 5 O -0.461 6.461 6 C 0.071 3.929 7 N -0.456 5.456 8 C 0.165 3.835 9 C -0.504 4.504 10 H 0.087 0.913 11 C 0.073 3.927 12 N -0.896 5.896 13 Si 0.865 3.135 14 H -0.275 1.275 15 H -0.285 1.285 16 H -0.266 1.266 17 C 0.303 3.697 18 N -0.451 5.451 19 C 0.088 3.912 20 C -0.100 4.100 21 C 0.078 3.922 22 C -0.097 4.097 23 N -0.432 5.432 24 C 0.160 3.840 25 Cl 0.007 6.993 26 H 0.065 0.935 27 H 0.064 0.936 28 H 0.077 0.923 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.083 0.917 32 H 0.105 0.895 33 H 0.013 0.987 34 H 0.035 0.965 35 H 0.263 0.737 36 H 0.080 0.920 37 H 0.080 0.920 38 H 0.081 0.919 39 H 0.082 0.918 40 H 0.079 0.921 41 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.794 10.794 -6.528 17.967 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.012 4.012 3 O -0.286 6.286 4 C 0.295 3.705 5 O -0.343 6.343 6 C -0.058 4.058 7 N -0.180 5.180 8 C 0.041 3.959 9 C -0.542 4.542 10 H 0.105 0.895 11 C -0.129 4.129 12 N -0.535 5.535 13 Si 0.692 3.308 14 H -0.200 1.200 15 H -0.211 1.211 16 H -0.191 1.191 17 C 0.070 3.930 18 N -0.169 5.169 19 C -0.055 4.055 20 C -0.158 4.158 21 C -0.062 4.062 22 C -0.155 4.155 23 N -0.150 5.150 24 C -0.010 4.010 25 Cl 0.036 6.964 26 H 0.084 0.916 27 H 0.084 0.916 28 H 0.095 0.905 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.101 0.899 32 H 0.123 0.877 33 H 0.031 0.969 34 H 0.053 0.947 35 H 0.073 0.927 36 H 0.099 0.901 37 H 0.099 0.901 38 H 0.099 0.901 39 H 0.101 0.899 40 H 0.098 0.902 41 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -12.240 9.866 -6.810 17.132 hybrid contribution -0.476 -0.035 1.476 1.551 sum -12.716 9.831 -5.334 16.935 Atomic orbital electron populations 1.21789 0.92973 1.02690 1.03277 1.22954 0.94909 0.80608 1.02747 1.86452 1.24982 1.32126 1.85071 1.23388 0.80313 0.92753 0.74063 1.90777 1.59666 1.42137 1.41729 1.21453 0.89052 0.90981 1.04293 1.59888 1.04354 1.19698 1.34083 1.20475 0.98966 0.95266 0.81168 1.20947 0.95494 1.41786 0.96012 0.89460 1.24801 0.94703 0.94956 0.98426 1.69881 1.12076 1.43848 1.27654 0.87009 0.80196 0.79067 0.84499 1.20048 1.21059 1.19098 1.20124 0.94041 0.89004 0.89796 1.68485 1.22007 0.98949 1.27484 1.21954 0.94502 0.94221 0.94775 1.20728 1.02655 0.92820 0.99561 1.21884 0.96635 0.95085 0.92602 1.20699 1.00729 0.90640 1.03420 1.67630 1.19857 0.97888 1.29604 1.22485 0.95557 0.89919 0.93043 1.98417 1.94387 1.35498 1.68120 0.91627 0.91648 0.90466 0.91266 0.91243 0.89949 0.87687 0.96883 0.94720 0.92690 0.90144 0.90069 0.90057 0.89914 0.90225 0.90104 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.33 10.29 37.16 0.38 -0.95 16 2 C 0.06 0.78 6.19 37.16 0.23 1.01 16 3 O -0.37 -5.57 10.22 -39.26 -0.40 -5.97 16 4 C 0.46 8.25 7.36 36.01 0.27 8.51 16 5 O -0.46 -10.11 14.97 -18.75 -0.28 -10.39 16 6 C 0.07 1.22 5.39 -4.98 -0.03 1.20 16 7 N -0.46 -9.83 3.45 -175.74 -0.61 -10.44 16 8 C 0.17 4.13 3.34 -4.98 -0.02 4.12 16 9 C -0.50 -14.79 9.51 -34.44 -0.33 -15.11 16 10 H 0.09 2.79 8.06 -52.48 -0.42 2.37 16 11 C 0.07 2.17 5.47 -17.82 -0.10 2.08 16 12 N -0.90 -28.14 13.96 55.43 0.77 -27.36 16 13 Si 0.87 22.06 27.56 -169.99 -4.68 17.38 16 14 H -0.27 -6.93 7.11 56.52 0.40 -6.53 16 15 H -0.28 -7.15 7.11 56.52 0.40 -6.75 16 16 H -0.27 -6.52 6.42 56.52 0.36 -6.16 16 17 C 0.30 6.23 4.85 -154.66 -0.75 5.48 16 18 N -0.45 -8.51 9.54 -8.45 -0.08 -8.59 16 19 C 0.09 1.35 6.78 -82.45 -0.56 0.80 16 20 C -0.10 -1.05 9.36 36.01 0.34 -0.71 16 21 C 0.08 1.18 6.78 -82.43 -0.56 0.62 16 22 C -0.10 -0.97 9.36 36.01 0.34 -0.63 16 23 N -0.43 -7.86 10.40 -6.28 -0.07 -7.92 16 24 C 0.16 3.21 7.31 -17.02 -0.12 3.08 16 25 Cl 0.01 0.14 28.62 -51.86 -1.48 -1.34 16 26 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 27 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 28 H 0.08 0.54 8.14 -51.93 -0.42 0.12 16 29 H 0.07 0.86 8.13 -51.93 -0.42 0.44 16 30 H 0.07 0.91 8.13 -51.93 -0.42 0.49 16 31 H 0.08 1.33 8.07 -51.93 -0.42 0.91 16 32 H 0.11 1.54 7.99 -51.93 -0.41 1.13 16 33 H 0.01 0.34 6.17 -51.92 -0.32 0.02 16 34 H 0.03 0.89 6.11 -51.93 -0.32 0.57 16 35 H 0.26 7.74 8.31 -40.82 -0.34 7.40 16 36 H 0.08 0.67 8.14 -51.93 -0.42 0.25 16 37 H 0.08 0.92 8.14 -51.93 -0.42 0.50 16 38 H 0.08 0.66 6.68 -51.93 -0.35 0.31 16 39 H 0.08 0.77 8.14 -51.93 -0.42 0.35 16 40 H 0.08 0.76 8.14 -51.93 -0.42 0.33 16 41 H 0.08 0.57 6.68 -51.93 -0.35 0.22 16 LS Contribution 362.69 15.07 5.47 5.47 Total: -1.00 -35.60 362.69 -7.84 -43.44 By element: Atomic # 1 Polarization: 1.81 SS G_CDS: -5.57 Total: -3.76 kcal Atomic # 6 Polarization: 10.40 SS G_CDS: -0.91 Total: 9.49 kcal Atomic # 7 Polarization: -54.33 SS G_CDS: 0.02 Total: -54.31 kcal Atomic # 8 Polarization: -15.68 SS G_CDS: -0.68 Total: -16.36 kcal Atomic # 14 Polarization: 22.06 SS G_CDS: -4.68 Total: 17.38 kcal Atomic # 17 Polarization: 0.14 SS G_CDS: -1.48 Total: -1.34 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -35.60 -7.84 -43.44 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001157159575.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.296 kcal (2) G-P(sol) polarization free energy of solvation -35.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.840 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.436 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.140 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds